RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 RCAN3Q9UKA8 241 aa25.31■■□□□ 1.64
LMO4-204ENST00000495705 UTRNP46939 3433 aa25.31■■□□□ 1.64
LMO4-204ENST00000495705 C21orf2O43822 256 aa25.3■■□□□ 1.64
LMO4-204ENST00000495705 GRAPQ13588 217 aa25.3■■□□□ 1.64
LMO4-204ENST00000495705 ARHGAP27Q6ZUM4 889 aa25.3■■□□□ 1.64
LMO4-204ENST00000495705 GRAPLQ8TC17 118 aaPredicted RBP25.3■■□□□ 1.64
LMO4-204ENST00000495705 UTYO14607 1347 aa25.3■■□□□ 1.64
LMO4-204ENST00000495705 FER1L6Q2WGJ9 1857 aa25.3■■□□□ 1.64
LMO4-204ENST00000495705 C7orf43Q8WVR3 580 aa25.29■■□□□ 1.64
LMO4-204ENST00000495705 TAF1P21675 1872 aa25.28■■□□□ 1.64
LMO4-204ENST00000495705 PPEF1O14829 653 aaPredicted RBP25.28■■□□□ 1.64
LMO4-204ENST00000495705 BBOX1O75936 387 aa25.28■■□□□ 1.64
LMO4-204ENST00000495705 ZNF219Q9P2Y4 722 aaPredicted RBP25.28■■□□□ 1.64
LMO4-204ENST00000495705 RTL9Q8NET4 1388 aa25.28■■□□□ 1.64
LMO4-204ENST00000495705 CCDC93Q567U6 631 aa25.27■■□□□ 1.64
LMO4-204ENST00000495705 INTS3Q68E01 1043 aaKnown RBP25.27■■□□□ 1.64
LMO4-204ENST00000495705 CC2D2BQ6DHV5 1058 aa25.27■■□□□ 1.64
LMO4-204ENST00000495705 TMC4Q7Z404 712 aa25.27■■□□□ 1.64
LMO4-204ENST00000495705 TTLL11Q8NHH1 800 aa25.27■■□□□ 1.64
LMO4-204ENST00000495705 TMX4Q9H1E5 349 aaPredicted RBP25.26■■□□□ 1.63
LMO4-204ENST00000495705 NBPF7P0C2Y1 421 aaPredicted RBP25.25■■□□□ 1.63
LMO4-204ENST00000495705 USP44Q9H0E7 712 aa25.25■■□□□ 1.63
LMO4-204ENST00000495705 LRRC37AA6NMS7 1700 aa25.25■■□□□ 1.63
LMO4-204ENST00000495705 CSF1RP07333 972 aa25.24■■□□□ 1.63
LMO4-204ENST00000495705 GRIPAP1Q4V328 841 aa25.24■■□□□ 1.63
LMO4-204ENST00000495705 FTSJ3Q8IY81 847 aaKnown RBP25.24■■□□□ 1.63
LMO4-204ENST00000495705 CLUAP1Q96AJ1 413 aa25.24■■□□□ 1.63
LMO4-204ENST00000495705 CCDC85AQ96PX6 553 aaPredicted RBP25.24■■□□□ 1.63
LMO4-204ENST00000495705 LTBP3Q9NS15 1303 aa25.23■■□□□ 1.63
LMO4-204ENST00000495705 RTKN2Q8IZC4 609 aa25.23■■□□□ 1.63
LMO4-204ENST00000495705 CELF1Q92879 486 aaKnown RBP25.23■■□□□ 1.63
LMO4-204ENST00000495705 CDC5LQ99459 802 aaKnown RBP25.23■■□□□ 1.63
LMO4-204ENST00000495705 SEC31BQ9NQW1 1179 aa25.23■■□□□ 1.63
LMO4-204ENST00000495705 ATP6V0A2Q9Y487 856 aa25.23■■□□□ 1.63
LMO4-204ENST00000495705 SBF1O95248 1867 aa25.23■■□□□ 1.63
LMO4-204ENST00000495705 NFKBIEO00221 500 aa25.22■■□□□ 1.63
LMO4-204ENST00000495705 RPS8P62241 208 aaKnown RBP25.22■■□□□ 1.63
LMO4-204ENST00000495705 FOXO4P98177 505 aa25.22■■□□□ 1.63
LMO4-204ENST00000495705 SP8Q8IXZ3 490 aa25.22■■□□□ 1.63
LMO4-204ENST00000495705 DZIP1LQ8IYY4 767 aaKnown RBP25.22■■□□□ 1.63
LMO4-204ENST00000495705 SUCLG2Q96I99 432 aa25.22■■□□□ 1.63
LMO4-204ENST00000495705 GREM2Q9H772 168 aa25.22■■□□□ 1.63
LMO4-204ENST00000495705 HDAC5Q9UQL6 1122 aa25.22■■□□□ 1.63
LMO4-204ENST00000495705 TNNQ9UQP3 1299 aa25.22■■□□□ 1.63
LMO4-204ENST00000495705 SNED1Q8TER0 1413 aa25.21■■□□□ 1.63
LMO4-204ENST00000495705 COL4A1P02462 1669 aa25.21■■□□□ 1.63
LMO4-204ENST00000495705 MS4A1P11836 297 aa25.21■■□□□ 1.63
LMO4-204ENST00000495705 TAOK3Q9H2K8 898 aa25.21■■□□□ 1.63
LMO4-204ENST00000495705 UBTFL1P0CB47 393 aaPredicted RBP25.2■■□□□ 1.62
LMO4-204ENST00000495705 OLFM4Q6UX06 510 aa25.2■■□□□ 1.62
LMO4-204ENST00000495705 ANKRD18AQ8IVF6 992 aa25.2■■□□□ 1.62
LMO4-204ENST00000495705 CCDC88AQ3V6T2 1871 aa25.19■■□□□ 1.62
LMO4-204ENST00000495705 SPEF2Q9C093 1822 aa25.19■■□□□ 1.62
LMO4-204ENST00000495705 ITGA6P23229 1130 aa25.19■■□□□ 1.62
LMO4-204ENST00000495705 FKBP4Q02790 459 aaKnown RBP eCLIP25.19■■□□□ 1.62
LMO4-204ENST00000495705 RASSF7Q02833 373 aa25.19■■□□□ 1.62
LMO4-204ENST00000495705 FAM161AQ3B820 660 aa25.19■■□□□ 1.62
LMO4-204ENST00000495705 EPHA10Q5JZY3 1008 aa25.19■■□□□ 1.62
LMO4-204ENST00000495705 LMBR1LQ6UX01 489 aa25.19■■□□□ 1.62
LMO4-204ENST00000495705 GNAI3P08754 354 aa25.18■■□□□ 1.62
LMO4-204ENST00000495705 LMNB1P20700 586 aa25.18■■□□□ 1.62
LMO4-204ENST00000495705 TMEM57Q8N5G2 664 aa25.18■■□□□ 1.62
LMO4-204ENST00000495705 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.18■■□□□ 1.62
LMO4-204ENST00000495705 KAZALD1Q96I82 304 aa25.18■■□□□ 1.62
LMO4-204ENST00000495705 CHMP3Q9Y3E7 222 aa25.18■■□□□ 1.62
LMO4-204ENST00000495705 ANKRD18BA2A2Z9 1011 aa25.17■■□□□ 1.62
LMO4-204ENST00000495705 IFIT5Q13325 482 aaKnown RBP25.17■■□□□ 1.62
LMO4-204ENST00000495705 PSMD1Q99460 953 aa25.17■■□□□ 1.62
LMO4-204ENST00000495705 BICC1Q9H694 974 aaKnown RBP25.17■■□□□ 1.62
LMO4-204ENST00000495705 DICER1Q9UPY3 1922 aaKnown RBP25.17■■□□□ 1.62
LMO4-204ENST00000495705 IGHMBP2P38935 993 aaKnown RBP25.16■■□□□ 1.62
LMO4-204ENST00000495705 RABL6Q3YEC7 729 aaPredicted RBP25.16■■□□□ 1.62
LMO4-204ENST00000495705 MEIS3Q99687 375 aa25.16■■□□□ 1.62
LMO4-204ENST00000495705 CCDC57Q2TAC2 916 aa25.15■■□□□ 1.62
LMO4-204ENST00000495705 C9orf131Q5VYM1 1079 aa25.15■■□□□ 1.62
LMO4-204ENST00000495705 RLBP1P12271 317 aa25.14■■□□□ 1.62
LMO4-204ENST00000495705 MPNDQ8N594 471 aa25.14■■□□□ 1.62
LMO4-204ENST00000495705 ANKRD44Q8N8A2 993 aa25.14■■□□□ 1.62
LMO4-204ENST00000495705 BSDC1Q9NW68 430 aaPredicted RBP25.14■■□□□ 1.62
LMO4-204ENST00000495705 RNF181Q9P0P0 153 aa25.14■■□□□ 1.62
LMO4-204ENST00000495705 TIAM2Q8IVF5 1701 aa25.14■■□□□ 1.61
LMO4-204ENST00000495705 LTBP1Q14766 1721 aa25.13■■□□□ 1.61
LMO4-204ENST00000495705 YY1P25490 414 aa25.13■■□□□ 1.61
LMO4-204ENST00000495705 DPP8Q6V1X1 898 aaPredicted RBP25.13■■□□□ 1.61
LMO4-204ENST00000495705 SLC51AQ86UW1 340 aa25.13■■□□□ 1.61
LMO4-204ENST00000495705 ITPRIPQ8IWB1 547 aa25.13■■□□□ 1.61
LMO4-204ENST00000495705 SUPT20HQ8NEM7 779 aa25.13■■□□□ 1.61
LMO4-204ENST00000495705 MPHOSPH8Q99549 860 aa25.12■■□□□ 1.61
LMO4-204ENST00000495705 RTFDC1Q9BY42 306 aaPredicted RBP25.12■■□□□ 1.61
LMO4-204ENST00000495705 DUOX1Q9NRD9 1551 aa25.11■■□□□ 1.61
LMO4-204ENST00000495705 PRELPP51888 382 aa25.11■■□□□ 1.61
LMO4-204ENST00000495705 PANK1Q8TE04 598 aa25.11■■□□□ 1.61
LMO4-204ENST00000495705 LRRFIP2Q9Y608 721 aaKnown RBP25.11■■□□□ 1.61
LMO4-204ENST00000495705 ZC3H4Q9UPT8 1303 aaKnown RBP25.11■■□□□ 1.61
LMO4-204ENST00000495705 PLIN1O60240 522 aa25.1■■□□□ 1.61
LMO4-204ENST00000495705 TAF7LQ5H9L4 462 aa25.1■■□□□ 1.61
LMO4-204ENST00000495705 ZNF277Q9NRM2 450 aaPredicted RBP25.1■■□□□ 1.61
LMO4-204ENST00000495705 NSFL1CQ9UNZ2 370 aaKnown RBP25.1■■□□□ 1.61
LMO4-204ENST00000495705 IARSP41252 1262 aaKnown RBP25.09■■□□□ 1.61
LMO4-204ENST00000495705 PDE3AQ14432 1141 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms