RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 SAPCD2Q86UD0 394 aa23.04■■□□□ 1.28
TMEM53-209ENST00000495630 HHIPL1Q96JK4 782 aa23.04■■□□□ 1.28
TMEM53-209ENST00000495630 CDHR2Q9BYE9 1310 aa23.04■■□□□ 1.28
TMEM53-209ENST00000495630 CELF2O95319 508 aaKnown RBP23.03■■□□□ 1.28
TMEM53-209ENST00000495630 ANXA1P04083 346 aa23.03■■□□□ 1.28
TMEM53-209ENST00000495630 HCLS1P14317 486 aaPredicted RBP23.03■■□□□ 1.28
TMEM53-209ENST00000495630 BCL2L13Q9BXK5 485 aa23.03■■□□□ 1.28
TMEM53-209ENST00000495630 GRAPQ13588 217 aa23.02■■□□□ 1.28
TMEM53-209ENST00000495630 TMC4Q7Z404 712 aa23.02■■□□□ 1.28
TMEM53-209ENST00000495630 GRAPLQ8TC17 118 aaPredicted RBP23.02■■□□□ 1.28
TMEM53-209ENST00000495630 TRMT112Q9UI30 125 aaKnown RBP23.02■■□□□ 1.28
TMEM53-209ENST00000495630 CA12O43570 354 aa23.01■■□□□ 1.27
TMEM53-209ENST00000495630 LMOD3Q0VAK6 560 aa23.01■■□□□ 1.27
TMEM53-209ENST00000495630 AIMP1Q12904 312 aaKnown RBP23.01■■□□□ 1.27
TMEM53-209ENST00000495630 CDC37L1Q7L3B6 337 aa23.01■■□□□ 1.27
TMEM53-209ENST00000495630 XAGE3Q8WTP9 111 aa23.01■■□□□ 1.27
TMEM53-209ENST00000495630 SH3TC1Q8TE82 1336 aa23.01■■□□□ 1.27
TMEM53-209ENST00000495630 AOC2O75106 756 aa23■■□□□ 1.27
TMEM53-209ENST00000495630 RAD17O75943 681 aa23■■□□□ 1.27
TMEM53-209ENST00000495630 TMPOP42166 694 aaKnown RBP23■■□□□ 1.27
TMEM53-209ENST00000495630 HIRAP54198 1017 aaPredicted RBP23■■□□□ 1.27
TMEM53-209ENST00000495630 GLIS2Q9BZE0 524 aaPredicted RBP23■■□□□ 1.27
TMEM53-209ENST00000495630 CNOT7Q9UIV1 285 aaKnown RBP23■■□□□ 1.27
TMEM53-209ENST00000495630 H7C1D1 291 aa22.99■■□□□ 1.27
TMEM53-209ENST00000495630 NECTIN2Q92692 538 aa22.98■■□□□ 1.27
TMEM53-209ENST00000495630 TRPM7Q96QT4 1865 aa22.96■■□□□ 1.27
TMEM53-209ENST00000495630 YDJCA8MPS7 323 aa22.96■■□□□ 1.27
TMEM53-209ENST00000495630 CHL1O00533 1208 aa22.96■■□□□ 1.27
TMEM53-209ENST00000495630 BRPF1P55201 1214 aaPredicted RBP22.96■■□□□ 1.27
TMEM53-209ENST00000495630 DPF2Q92785 391 aa22.96■■□□□ 1.27
TMEM53-209ENST00000495630 CCDC85CA6NKD9 419 aa22.95■■□□□ 1.26
TMEM53-209ENST00000495630 RGS19P49795 217 aa22.95■■□□□ 1.26
TMEM53-209ENST00000495630 WASHC4Q2M389 1173 aa22.95■■□□□ 1.26
TMEM53-209ENST00000495630 TRPM4Q8TD43 1214 aa22.95■■□□□ 1.26
TMEM53-209ENST00000495630 THSD7BQ9C0I4 1608 aa22.95■■□□□ 1.26
TMEM53-209ENST00000495630 RALBP1Q15311 655 aa22.94■■□□□ 1.26
TMEM53-209ENST00000495630 SF3B3Q15393 1217 aaKnown RBP22.94■■□□□ 1.26
TMEM53-209ENST00000495630 FAM161AQ3B820 660 aa22.94■■□□□ 1.26
TMEM53-209ENST00000495630 PLBD2Q8NHP8 589 aa22.94■■□□□ 1.26
TMEM53-209ENST00000495630 ZNF408Q9H9D4 720 aa22.94■■□□□ 1.26
TMEM53-209ENST00000495630 TSKSQ9UJT2 592 aa22.94■■□□□ 1.26
TMEM53-209ENST00000495630 ANKRD13DQ6ZTN6 518 aa22.93■■□□□ 1.26
TMEM53-209ENST00000495630 MICALL2Q8IY33 904 aa22.93■■□□□ 1.26
TMEM53-209ENST00000495630 NOGQ13253 232 aa22.92■■□□□ 1.26
TMEM53-209ENST00000495630 USP48Q86UV5 1035 aa22.92■■□□□ 1.26
TMEM53-209ENST00000495630 NSFL1CQ9UNZ2 370 aaKnown RBP22.92■■□□□ 1.26
TMEM53-209ENST00000495630 SHTN1A0MZ66 631 aa22.91■■□□□ 1.26
TMEM53-209ENST00000495630 MLLT1Q03111 559 aaPredicted RBP22.91■■□□□ 1.26
TMEM53-209ENST00000495630 ISCA1Q9BUE6 129 aa22.91■■□□□ 1.26
TMEM53-209ENST00000495630 CHPF2Q9P2E5 772 aa22.91■■□□□ 1.26
TMEM53-209ENST00000495630 ZBTB12Q9Y330 459 aaPredicted RBP22.91■■□□□ 1.26
TMEM53-209ENST00000495630 HOXB7P09629 217 aa22.9■■□□□ 1.26
TMEM53-209ENST00000495630 KRT24Q2M2I5 525 aa22.9■■□□□ 1.26
TMEM53-209ENST00000495630 FAM89AQ96GI7 184 aa22.9■■□□□ 1.26
TMEM53-209ENST00000495630 ANKRD36CQ5JPF3 1778 aa22.89■■□□□ 1.26
TMEM53-209ENST00000495630 PSMD14O00487 310 aa22.89■■□□□ 1.25
TMEM53-209ENST00000495630 RPS12P25398 132 aaKnown RBP22.89■■□□□ 1.25
TMEM53-209ENST00000495630 HUNKP57058 714 aa22.89■■□□□ 1.25
TMEM53-209ENST00000495630 TRIM28Q13263 835 aaKnown RBP22.89■■□□□ 1.25
TMEM53-209ENST00000495630 NEUROD2Q15784 382 aa22.89■■□□□ 1.25
TMEM53-209ENST00000495630 SAMD7Q7Z3H4 446 aa22.89■■□□□ 1.25
TMEM53-209ENST00000495630 CELF1Q92879 486 aaKnown RBP22.89■■□□□ 1.25
TMEM53-209ENST00000495630 DBF4Q9UBU7 674 aaPredicted RBP22.89■■□□□ 1.25
TMEM53-209ENST00000495630 LAS1LQ9Y4W2 734 aaKnown RBP22.89■■□□□ 1.25
TMEM53-209ENST00000495630 C6orf229H3BNL8 230 aa22.88■■□□□ 1.25
TMEM53-209ENST00000495630 HDGFL1Q5TGJ6 251 aa22.88■■□□□ 1.25
TMEM53-209ENST00000495630 EYA3Q99504 573 aa22.88■■□□□ 1.25
TMEM53-209ENST00000495630 MCOLN1Q9GZU1 580 aa22.88■■□□□ 1.25
TMEM53-209ENST00000495630 DBNDD1Q9H9R9 158 aa22.88■■□□□ 1.25
TMEM53-209ENST00000495630 POLLQ9UGP5 575 aa22.88■■□□□ 1.25
TMEM53-209ENST00000495630 RIMBP2O15034 1052 aa22.87■■□□□ 1.25
TMEM53-209ENST00000495630 KRT26Q7Z3Y9 468 aa22.87■■□□□ 1.25
TMEM53-209ENST00000495630 ZNF428Q96B54 188 aa22.87■■□□□ 1.25
TMEM53-209ENST00000495630 HYPKQ9NX55 129 aa22.87■■□□□ 1.25
TMEM53-209ENST00000495630 TRIM35Q9UPQ4 493 aa22.87■■□□□ 1.25
TMEM53-209ENST00000495630 ATP5J2-PTCD1G3V325 749 aa22.86■■□□□ 1.25
TMEM53-209ENST00000495630 RPS8P62241 208 aaKnown RBP22.86■■□□□ 1.25
TMEM53-209ENST00000495630 GPSM2P81274 684 aa22.86■■□□□ 1.25
TMEM53-209ENST00000495630 TBC1D10BQ4KMP7 808 aaPredicted RBP22.86■■□□□ 1.25
TMEM53-209ENST00000495630 C2orf69Q8N8R5 385 aa22.86■■□□□ 1.25
TMEM53-209ENST00000495630 DCPSQ96C86 337 aaKnown RBP22.86■■□□□ 1.25
TMEM53-209ENST00000495630 RGMBQ6NW40 437 aa22.85■■□□□ 1.25
TMEM53-209ENST00000495630 CCDC146Q8IYE0 955 aa22.85■■□□□ 1.25
TMEM53-209ENST00000495630 CCDC102AQ96A19 550 aa22.85■■□□□ 1.25
TMEM53-209ENST00000495630 RUNDC1Q96C34 613 aa22.85■■□□□ 1.25
TMEM53-209ENST00000495630 ZIC5Q96T25 663 aa22.85■■□□□ 1.25
TMEM53-209ENST00000495630 LAMB2P55268 1798 aa22.84■■□□□ 1.25
TMEM53-209ENST00000495630 IRS4O14654 1257 aaPredicted RBP22.84■■□□□ 1.25
TMEM53-209ENST00000495630 ECE2O60344 883 aa22.84■■□□□ 1.25
TMEM53-209ENST00000495630 SLC34A2O95436 690 aa22.84■■□□□ 1.25
TMEM53-209ENST00000495630 DLK2Q6UY11 383 aa22.84■■□□□ 1.25
TMEM53-209ENST00000495630 TBC1D16Q8TBP0 767 aa22.84■■□□□ 1.25
TMEM53-209ENST00000495630 ZC3H12CQ9C0D7 883 aaKnown RBP22.84■■□□□ 1.25
TMEM53-209ENST00000495630 GBA2Q9HCG7 927 aaPredicted RBP22.84■■□□□ 1.25
TMEM53-209ENST00000495630 KCNQ5Q9NR82 932 aa22.84■■□□□ 1.25
TMEM53-209ENST00000495630 DUOX1Q9NRD9 1551 aa22.84■■□□□ 1.25
TMEM53-209ENST00000495630 EGFRP00533 1210 aa22.83■■□□□ 1.25
TMEM53-209ENST00000495630 VIL1P09327 827 aaKnown RBP22.83■■□□□ 1.25
TMEM53-209ENST00000495630 HSP90B1P14625 803 aaKnown RBP22.83■■□□□ 1.25
TMEM53-209ENST00000495630 DGKZQ13574 1117 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms