RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 SERPINB2P05120 415 aa19.49■□□□□ 0.71
PHF1-211ENST00000495509 ANKRD45Q5TZF3 282 aa19.49■□□□□ 0.71
PHF1-211ENST00000495509 FAM161AQ3B820 660 aa19.49■□□□□ 0.71
PHF1-211ENST00000495509 GREM2Q9H772 168 aa19.49■□□□□ 0.71
PHF1-211ENST00000495509 PTPN12Q05209 780 aaKnown RBP19.48■□□□□ 0.71
PHF1-211ENST00000495509 SLC10A5Q5PT55 438 aa19.48■□□□□ 0.71
PHF1-211ENST00000495509 ZNF594Q96JF6 807 aaPredicted RBP19.48■□□□□ 0.71
PHF1-211ENST00000495509 BCL11AQ9H165 835 aa19.48■□□□□ 0.71
PHF1-211ENST00000495509 NPHP1O15259 732 aa19.47■□□□□ 0.71
PHF1-211ENST00000495509 SMARCA5O60264 1052 aaPredicted RBP19.47■□□□□ 0.71
PHF1-211ENST00000495509 NUCB1Q02818 461 aa19.47■□□□□ 0.71
PHF1-211ENST00000495509 PRR5LQ6MZQ0 368 aa19.47■□□□□ 0.71
PHF1-211ENST00000495509 SIL1Q9H173 461 aa19.47■□□□□ 0.71
PHF1-211ENST00000495509 NOP58Q9Y2X3 529 aaKnown RBP19.47■□□□□ 0.71
PHF1-211ENST00000495509 MMP10P09238 476 aa19.47■□□□□ 0.71
PHF1-211ENST00000495509 CNBD1Q8NA66 436 aa19.47■□□□□ 0.71
PHF1-211ENST00000495509 LNPKQ9C0E8 428 aa19.46■□□□□ 0.71
PHF1-211ENST00000495509 ITGA6P23229 1130 aa19.45■□□□□ 0.7
PHF1-211ENST00000495509 CCDC57Q2TAC2 916 aa19.45■□□□□ 0.7
PHF1-211ENST00000495509 CHD1LQ86WJ1 897 aa19.45■□□□□ 0.7
PHF1-211ENST00000495509 COPRSQ9NQ92 184 aa19.45■□□□□ 0.7
PHF1-211ENST00000495509 LAMB2P55268 1798 aa19.45■□□□□ 0.7
PHF1-211ENST00000495509 IFIT5Q13325 482 aaKnown RBP19.44■□□□□ 0.7
PHF1-211ENST00000495509 SEC31BQ9NQW1 1179 aa19.44■□□□□ 0.7
PHF1-211ENST00000495509 HSP90B1P14625 803 aaKnown RBP19.44■□□□□ 0.7
PHF1-211ENST00000495509 PDE4AP27815 886 aa19.44■□□□□ 0.7
PHF1-211ENST00000495509 R3HDM1Q15032 1099 aaKnown RBP19.44■□□□□ 0.7
PHF1-211ENST00000495509 C16orf71Q8IYS4 520 aaPredicted RBP19.44■□□□□ 0.7
PHF1-211ENST00000495509 PUS3Q9BZE2 481 aaKnown RBP19.44■□□□□ 0.7
PHF1-211ENST00000495509 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.44■□□□□ 0.7
PHF1-211ENST00000495509 CASZ1Q86V15 1759 aa19.44■□□□□ 0.7
PHF1-211ENST00000495509 TAF1P21675 1872 aa19.43■□□□□ 0.7
PHF1-211ENST00000495509 RGS3P49796 1198 aa19.42■□□□□ 0.7
PHF1-211ENST00000495509 G3BP1Q13283 466 aaKnown RBP eCLIP19.42■□□□□ 0.7
PHF1-211ENST00000495509 OS9Q13438 667 aaPredicted RBP19.42■□□□□ 0.7
PHF1-211ENST00000495509 SF3B3Q15393 1217 aaKnown RBP19.42■□□□□ 0.7
PHF1-211ENST00000495509 CCDC152Q4G0S7 254 aa19.42■□□□□ 0.7
PHF1-211ENST00000495509 RHPN1Q8TCX5 695 aa19.42■□□□□ 0.7
PHF1-211ENST00000495509 NLRP3Q96P20 1036 aa19.42■□□□□ 0.7
PHF1-211ENST00000495509 LRRCC1Q9C099 1032 aa19.42■□□□□ 0.7
PHF1-211ENST00000495509 PARP3Q9Y6F1 533 aa19.42■□□□□ 0.7
PHF1-211ENST00000495509 ANKRD18BA2A2Z9 1011 aa19.42■□□□□ 0.7
PHF1-211ENST00000495509 RAB11FIP3O75154 756 aa19.42■□□□□ 0.7
PHF1-211ENST00000495509 SASH1O94885 1247 aa19.42■□□□□ 0.7
PHF1-211ENST00000495509 LRRC24Q50LG9 513 aa19.42■□□□□ 0.7
PHF1-211ENST00000495509 IL1RAPL2Q9NP60 686 aa19.42■□□□□ 0.7
PHF1-211ENST00000495509 TNRC6CQ9HCJ0 1690 aaKnown RBP19.41■□□□□ 0.7
PHF1-211ENST00000495509 HSP90AB4PQ58FF6 505 aa19.41■□□□□ 0.7
PHF1-211ENST00000495509 ATG9AQ7Z3C6 839 aa19.41■□□□□ 0.7
PHF1-211ENST00000495509 ST5P78524 1137 aa19.4■□□□□ 0.7
PHF1-211ENST00000495509 TAF7LQ5H9L4 462 aa19.4■□□□□ 0.7
PHF1-211ENST00000495509 COL4A1P02462 1669 aa19.4■□□□□ 0.7
PHF1-211ENST00000495509 OTUD7AQ8TE49 926 aaPredicted RBP19.39■□□□□ 0.7
PHF1-211ENST00000495509 KIF1BPQ96EK5 621 aa19.39■□□□□ 0.7
PHF1-211ENST00000495509 NRXN2Q9P2S2 1712 aa19.39■□□□□ 0.69
PHF1-211ENST00000495509 PSDA5PKW4 1024 aaPredicted RBP19.39■□□□□ 0.69
PHF1-211ENST00000495509 EYA2O00167 538 aa19.39■□□□□ 0.69
PHF1-211ENST00000495509 ZBTB7AO95365 584 aa19.39■□□□□ 0.69
PHF1-211ENST00000495509 SLC16A10Q8TF71 515 aa19.39■□□□□ 0.69
PHF1-211ENST00000495509 LDHAL6AQ6ZMR3 332 aa19.38■□□□□ 0.69
PHF1-211ENST00000495509 ZBTB47Q9UFB7 747 aaPredicted RBP19.38■□□□□ 0.69
PHF1-211ENST00000495509 RTL9Q8NET4 1388 aa19.38■□□□□ 0.69
PHF1-211ENST00000495509 TFCP2Q12800 502 aa19.37■□□□□ 0.69
PHF1-211ENST00000495509 ERC1Q8IUD2 1116 aa19.37■□□□□ 0.69
PHF1-211ENST00000495509 ATF5Q9Y2D1 282 aaPredicted RBP19.37■□□□□ 0.69
PHF1-211ENST00000495509 RIPOR2Q9Y4F9 1068 aa19.37■□□□□ 0.69
PHF1-211ENST00000495509 ANKRD31Q8N7Z5 1873 aa19.36■□□□□ 0.69
PHF1-211ENST00000495509 CIAO1O76071 339 aa19.36■□□□□ 0.69
PHF1-211ENST00000495509 CELF1Q92879 486 aaKnown RBP19.36■□□□□ 0.69
PHF1-211ENST00000495509 RIC1Q4ADV7 1423 aa19.35■□□□□ 0.69
PHF1-211ENST00000495509 IL15P40933 162 aaPredicted RBP19.35■□□□□ 0.69
PHF1-211ENST00000495509 BRIP1Q9BX63 1249 aa19.35■□□□□ 0.69
PHF1-211ENST00000495509 SPEF2Q9C093 1822 aa19.35■□□□□ 0.69
PHF1-211ENST00000495509 KLRG2A4D1S0 409 aaPredicted RBP19.34■□□□□ 0.69
PHF1-211ENST00000495509 CRY2Q49AN0 593 aa19.34■□□□□ 0.69
PHF1-211ENST00000495509 PLEKHM2Q8IWE5 1019 aa19.34■□□□□ 0.69
PHF1-211ENST00000495509 CNNM1Q9NRU3 951 aa19.34■□□□□ 0.69
PHF1-211ENST00000495509 DDX46Q7L014 1031 aaKnown RBP19.34■□□□□ 0.69
PHF1-211ENST00000495509 EAF2Q96CJ1 260 aaPredicted RBP19.34■□□□□ 0.69
PHF1-211ENST00000495509 CDC5LQ99459 802 aaKnown RBP19.34■□□□□ 0.69
PHF1-211ENST00000495509 MPHOSPH8Q99549 860 aa19.34■□□□□ 0.69
PHF1-211ENST00000495509 FBXO3Q9UK99 471 aa19.34■□□□□ 0.69
PHF1-211ENST00000495509 IGHMBP2P38935 993 aaKnown RBP19.33■□□□□ 0.68
PHF1-211ENST00000495509 ANKRD18AQ8IVF6 992 aa19.33■□□□□ 0.68
PHF1-211ENST00000495509 RPS8P62241 208 aaKnown RBP19.32■□□□□ 0.68
PHF1-211ENST00000495509 CLASRPQ8N2M8 674 aaKnown RBP19.32■□□□□ 0.68
PHF1-211ENST00000495509 HELBQ8NG08 1087 aaPredicted RBP19.32■□□□□ 0.68
PHF1-211ENST00000495509 MTFR1LQ9H019 292 aa19.32■□□□□ 0.68
PHF1-211ENST00000495509 CEP126Q9P2H0 1117 aa19.32■□□□□ 0.68
PHF1-211ENST00000495509 AACSQ86V21 672 aa19.32■□□□□ 0.68
PHF1-211ENST00000495509 RPGRQ92834 1020 aaKnown RBP19.32■□□□□ 0.68
PHF1-211ENST00000495509 CCDC8Q9H0W5 538 aaPredicted RBP19.32■□□□□ 0.68
PHF1-211ENST00000495509 SALL3Q9BXA9 1300 aa19.31■□□□□ 0.68
PHF1-211ENST00000495509 TIMM10P62072 90 aa19.31■□□□□ 0.68
PHF1-211ENST00000495509 METTL24Q5JXM2 366 aa19.31■□□□□ 0.68
PHF1-211ENST00000495509 TSHZ3Q63HK5 1081 aa19.31■□□□□ 0.68
PHF1-211ENST00000495509 SLC51AQ86UW1 340 aa19.31■□□□□ 0.68
PHF1-211ENST00000495509 TLR7Q9NYK1 1049 aaKnown RBP19.31■□□□□ 0.68
PHF1-211ENST00000495509 PDE6BP35913 854 aa19.3■□□□□ 0.68
PHF1-211ENST00000495509 TNNI3KQ59H18 835 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms