RNA–Protein interactions for RNA: ENST00000495488.5

PSEN2-208, Transcript of presenilin 2, humanhuman

TSL 3

Gene PSEN2, Length 627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN2-208ENST00000495488 C9orf78Q9NZ63 289 aaPredicted RBP21.54■■□□□ 1.04
PSEN2-208ENST00000495488 SBF1O95248 1867 aa21.54■■□□□ 1.04
PSEN2-208ENST00000495488 SPEF2Q9C093 1822 aa21.53■■□□□ 1.04
PSEN2-208ENST00000495488 CTSWP56202 376 aa21.53■■□□□ 1.04
PSEN2-208ENST00000495488 CCDC152Q4G0S7 254 aa21.53■■□□□ 1.04
PSEN2-208ENST00000495488 PELP1Q8IZL8 1130 aaKnown RBP21.53■■□□□ 1.04
PSEN2-208ENST00000495488 JARID2Q92833 1246 aaPredicted RBP21.53■■□□□ 1.04
PSEN2-208ENST00000495488 SOGA3Q5TF21 947 aa21.52■■□□□ 1.04
PSEN2-208ENST00000495488 DDX46Q7L014 1031 aaKnown RBP21.52■■□□□ 1.04
PSEN2-208ENST00000495488 C7orf43Q8WVR3 580 aa21.52■■□□□ 1.04
PSEN2-208ENST00000495488 COL4A1P02462 1669 aa21.52■■□□□ 1.04
PSEN2-208ENST00000495488 SNED1Q8TER0 1413 aa21.52■■□□□ 1.04
PSEN2-208ENST00000495488 CSF1RP07333 972 aa21.51■■□□□ 1.03
PSEN2-208ENST00000495488 TTLL11Q8NHH1 800 aa21.51■■□□□ 1.03
PSEN2-208ENST00000495488 USP44Q9H0E7 712 aa21.51■■□□□ 1.03
PSEN2-208ENST00000495488 WWC3Q9ULE0 1092 aa21.51■■□□□ 1.03
PSEN2-208ENST00000495488 NBPF7P0C2Y1 421 aaPredicted RBP21.5■■□□□ 1.03
PSEN2-208ENST00000495488 GRAPQ13588 217 aa21.5■■□□□ 1.03
PSEN2-208ENST00000495488 TMC4Q7Z404 712 aa21.5■■□□□ 1.03
PSEN2-208ENST00000495488 GRAPLQ8TC17 118 aaPredicted RBP21.5■■□□□ 1.03
PSEN2-208ENST00000495488 DICER1Q9UPY3 1922 aaKnown RBP21.5■■□□□ 1.03
PSEN2-208ENST00000495488 CCDC88AQ3V6T2 1871 aa21.49■■□□□ 1.03
PSEN2-208ENST00000495488 LTBP1Q14766 1721 aa21.49■■□□□ 1.03
PSEN2-208ENST00000495488 BBOX1O75936 387 aa21.49■■□□□ 1.03
PSEN2-208ENST00000495488 MS4A1P11836 297 aa21.49■■□□□ 1.03
PSEN2-208ENST00000495488 FOXO4P98177 505 aa21.49■■□□□ 1.03
PSEN2-208ENST00000495488 TNNQ9UQP3 1299 aa21.49■■□□□ 1.03
PSEN2-208ENST00000495488 GRIPAP1Q4V328 841 aa21.48■■□□□ 1.03
PSEN2-208ENST00000495488 CC2D2BQ6DHV5 1058 aa21.48■■□□□ 1.03
PSEN2-208ENST00000495488 DZIP1LQ8IYY4 767 aaKnown RBP21.48■■□□□ 1.03
PSEN2-208ENST00000495488 A0A1B0GUL6 1792 aa21.48■■□□□ 1.03
PSEN2-208ENST00000495488 PPEF1O14829 653 aaPredicted RBP21.47■■□□□ 1.03
PSEN2-208ENST00000495488 FTSJ3Q8IY81 847 aaKnown RBP21.47■■□□□ 1.03
PSEN2-208ENST00000495488 CLUAP1Q96AJ1 413 aa21.47■■□□□ 1.03
PSEN2-208ENST00000495488 KAZALD1Q96I82 304 aa21.47■■□□□ 1.03
PSEN2-208ENST00000495488 LTBP3Q9NS15 1303 aa21.47■■□□□ 1.03
PSEN2-208ENST00000495488 C21orf2O43822 256 aa21.46■■□□□ 1.03
PSEN2-208ENST00000495488 RABL6Q3YEC7 729 aaPredicted RBP21.46■■□□□ 1.03
PSEN2-208ENST00000495488 TMEM57Q8N5G2 664 aa21.46■■□□□ 1.03
PSEN2-208ENST00000495488 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.46■■□□□ 1.03
PSEN2-208ENST00000495488 SUCLG2Q96I99 432 aa21.46■■□□□ 1.03
PSEN2-208ENST00000495488 HDAC5Q9UQL6 1122 aa21.46■■□□□ 1.03
PSEN2-208ENST00000495488 CCDC93Q567U6 631 aa21.45■■□□□ 1.02
PSEN2-208ENST00000495488 CELF1Q92879 486 aaKnown RBP21.45■■□□□ 1.02
PSEN2-208ENST00000495488 GREM2Q9H772 168 aa21.45■■□□□ 1.02
PSEN2-208ENST00000495488 ATP6V0A2Q9Y487 856 aa21.45■■□□□ 1.02
PSEN2-208ENST00000495488 TIAM2Q8IVF5 1701 aa21.44■■□□□ 1.02
PSEN2-208ENST00000495488 GNAI3P08754 354 aa21.44■■□□□ 1.02
PSEN2-208ENST00000495488 UBTFL1P0CB47 393 aaPredicted RBP21.44■■□□□ 1.02
PSEN2-208ENST00000495488 RLBP1P12271 317 aa21.44■■□□□ 1.02
PSEN2-208ENST00000495488 EPHA10Q5JZY3 1008 aa21.44■■□□□ 1.02
PSEN2-208ENST00000495488 SP8Q8IXZ3 490 aa21.44■■□□□ 1.02
PSEN2-208ENST00000495488 CDC5LQ99459 802 aaKnown RBP21.44■■□□□ 1.02
PSEN2-208ENST00000495488 SEC31BQ9NQW1 1179 aa21.44■■□□□ 1.02
PSEN2-208ENST00000495488 NFKBIEO00221 500 aa21.43■■□□□ 1.02
PSEN2-208ENST00000495488 RPS8P62241 208 aaKnown RBP21.43■■□□□ 1.02
PSEN2-208ENST00000495488 FAM161AQ3B820 660 aa21.43■■□□□ 1.02
PSEN2-208ENST00000495488 LMBR1LQ6UX01 489 aa21.43■■□□□ 1.02
PSEN2-208ENST00000495488 RTKN2Q8IZC4 609 aa21.43■■□□□ 1.02
PSEN2-208ENST00000495488 MEIS3Q99687 375 aa21.43■■□□□ 1.02
PSEN2-208ENST00000495488 DUOX1Q9NRD9 1551 aa21.43■■□□□ 1.02
PSEN2-208ENST00000495488 ITGA6P23229 1130 aa21.42■■□□□ 1.02
PSEN2-208ENST00000495488 PDE3AQ14432 1141 aa21.42■■□□□ 1.02
PSEN2-208ENST00000495488 ARHGAP27Q6ZUM4 889 aa21.42■■□□□ 1.02
PSEN2-208ENST00000495488 ANKRD44Q8N8A2 993 aa21.42■■□□□ 1.02
PSEN2-208ENST00000495488 BICC1Q9H694 974 aaKnown RBP21.42■■□□□ 1.02
PSEN2-208ENST00000495488 CCDC85AQ96PX6 553 aaPredicted RBP21.41■■□□□ 1.02
PSEN2-208ENST00000495488 PSMD1Q99460 953 aa21.41■■□□□ 1.02
PSEN2-208ENST00000495488 ZNF219Q9P2Y4 722 aaPredicted RBP21.41■■□□□ 1.02
PSEN2-208ENST00000495488 IFIT5Q13325 482 aaKnown RBP21.4■■□□□ 1.02
PSEN2-208ENST00000495488 ANKRD18AQ8IVF6 992 aa21.4■■□□□ 1.02
PSEN2-208ENST00000495488 TMX4Q9H1E5 349 aaPredicted RBP21.4■■□□□ 1.02
PSEN2-208ENST00000495488 ANKRD18BA2A2Z9 1011 aa21.39■■□□□ 1.01
PSEN2-208ENST00000495488 OLFM4Q6UX06 510 aa21.39■■□□□ 1.01
PSEN2-208ENST00000495488 ITPRIPQ8IWB1 547 aa21.39■■□□□ 1.01
PSEN2-208ENST00000495488 PANK1Q8TE04 598 aa21.39■■□□□ 1.01
PSEN2-208ENST00000495488 TAOK3Q9H2K8 898 aa21.39■■□□□ 1.01
PSEN2-208ENST00000495488 BSDC1Q9NW68 430 aaPredicted RBP21.39■■□□□ 1.01
PSEN2-208ENST00000495488 PLIN1O60240 522 aa21.38■■□□□ 1.01
PSEN2-208ENST00000495488 FKBP4Q02790 459 aaKnown RBP eCLIP21.38■■□□□ 1.01
PSEN2-208ENST00000495488 MVPQ14764 893 aaKnown RBP21.38■■□□□ 1.01
PSEN2-208ENST00000495488 CCDC57Q2TAC2 916 aa21.38■■□□□ 1.01
PSEN2-208ENST00000495488 ZBTB7BO15156 539 aaPredicted RBP21.37■■□□□ 1.01
PSEN2-208ENST00000495488 IGHMBP2P38935 993 aaKnown RBP21.37■■□□□ 1.01
PSEN2-208ENST00000495488 RTFDC1Q9BY42 306 aaPredicted RBP21.37■■□□□ 1.01
PSEN2-208ENST00000495488 LRRFIP2Q9Y608 721 aaKnown RBP21.37■■□□□ 1.01
PSEN2-208ENST00000495488 GNAI2P04899 355 aa21.36■■□□□ 1.01
PSEN2-208ENST00000495488 LMNB1P20700 586 aa21.36■■□□□ 1.01
PSEN2-208ENST00000495488 RRP1P56182 461 aaKnown RBP21.36■■□□□ 1.01
PSEN2-208ENST00000495488 RASSF7Q02833 373 aa21.36■■□□□ 1.01
PSEN2-208ENST00000495488 MTX1Q13505 466 aa21.36■■□□□ 1.01
PSEN2-208ENST00000495488 PODXL2Q9NZ53 605 aa21.36■■□□□ 1.01
PSEN2-208ENST00000495488 DDX19BQ9UMR2 479 aa21.36■■□□□ 1.01
PSEN2-208ENST00000495488 CHMP3Q9Y3E7 222 aa21.36■■□□□ 1.01
PSEN2-208ENST00000495488 ZC3H4Q9UPT8 1303 aaKnown RBP21.35■■□□□ 1.01
PSEN2-208ENST00000495488 SLC51AQ86UW1 340 aa21.35■■□□□ 1.01
PSEN2-208ENST00000495488 VPS33BQ9H267 617 aa21.35■■□□□ 1.01
PSEN2-208ENST00000495488 PRELPP51888 382 aa21.34■■□□□ 1.01
PSEN2-208ENST00000495488 DPP8Q6V1X1 898 aaPredicted RBP21.34■■□□□ 1.01
PSEN2-208ENST00000495488 MPNDQ8N594 471 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms