RNA–Protein interactions for RNA: ENST00000495465.6

RAPGEF3-214, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-214ENST00000495465 CLEC11AQ9Y240 323 aa18.88■□□□□ 0.61
RAPGEF3-214ENST00000495465 COL4A5P29400 1685 aa18.87■□□□□ 0.61
RAPGEF3-214ENST00000495465 ANKRD36CQ5JPF3 1778 aa18.87■□□□□ 0.61
RAPGEF3-214ENST00000495465 SUPT20HQ8NEM7 779 aa18.87■□□□□ 0.61
RAPGEF3-214ENST00000495465 DDX58O95786 925 aaKnown RBP18.86■□□□□ 0.61
RAPGEF3-214ENST00000495465 SF3B3Q15393 1217 aaKnown RBP18.86■□□□□ 0.61
RAPGEF3-214ENST00000495465 JARID2Q92833 1246 aaPredicted RBP18.86■□□□□ 0.61
RAPGEF3-214ENST00000495465 RTFDC1Q9BY42 306 aaPredicted RBP18.86■□□□□ 0.61
RAPGEF3-214ENST00000495465 TWISTNBQ3B726 338 aaPredicted RBP18.85■□□□□ 0.61
RAPGEF3-214ENST00000495465 ZBTB38Q8NAP3 1195 aaPredicted RBP18.85■□□□□ 0.61
RAPGEF3-214ENST00000495465 CELF1Q92879 486 aaKnown RBP18.85■□□□□ 0.61
RAPGEF3-214ENST00000495465 STK31Q9BXU1 1019 aa18.85■□□□□ 0.61
RAPGEF3-214ENST00000495465 VPS33BQ9H267 617 aa18.85■□□□□ 0.61
RAPGEF3-214ENST00000495465 LMOD1P29536 600 aaPredicted RBP18.84■□□□□ 0.61
RAPGEF3-214ENST00000495465 TMC4Q7Z404 712 aa18.84■□□□□ 0.61
RAPGEF3-214ENST00000495465 PNMA8AQ86V59 439 aaPredicted RBP18.84■□□□□ 0.61
RAPGEF3-214ENST00000495465 CCDC191Q8NCU4 936 aa18.84■□□□□ 0.61
RAPGEF3-214ENST00000495465 METTL22Q9BUU2 404 aaPredicted RBP18.84■□□□□ 0.61
RAPGEF3-214ENST00000495465 CWC25Q9NXE8 425 aaPredicted RBP18.84■□□□□ 0.61
RAPGEF3-214ENST00000495465 MAP3K2Q9Y2U5 619 aa18.84■□□□□ 0.61
RAPGEF3-214ENST00000495465 IL16Q14005 1332 aa18.83■□□□□ 0.61
RAPGEF3-214ENST00000495465 ZNRF3Q9ULT6 936 aa18.83■□□□□ 0.6
RAPGEF3-214ENST00000495465 PI4KAP2A4QPH2 592 aa18.82■□□□□ 0.6
RAPGEF3-214ENST00000495465 EPS15P42566 896 aa18.82■□□□□ 0.6
RAPGEF3-214ENST00000495465 SCNN1DP51172 638 aa18.82■□□□□ 0.6
RAPGEF3-214ENST00000495465 CXCL9Q07325 125 aa18.82■□□□□ 0.6
RAPGEF3-214ENST00000495465 KIAA2012Q0VF49 1180 aa18.82■□□□□ 0.6
RAPGEF3-214ENST00000495465 NCBP3Q53F19 620 aaKnown RBP18.82■□□□□ 0.6
RAPGEF3-214ENST00000495465 KSR2Q6VAB6 950 aa18.82■□□□□ 0.6
RAPGEF3-214ENST00000495465 FAM9BQ8IZU0 186 aa18.82■□□□□ 0.6
RAPGEF3-214ENST00000495465 PI4KAP1Q8N8J0 262 aa18.82■□□□□ 0.6
RAPGEF3-214ENST00000495465 JMYQ8N9B5 988 aa18.82■□□□□ 0.6
RAPGEF3-214ENST00000495465 NSFL1CQ9UNZ2 370 aaKnown RBP18.82■□□□□ 0.6
RAPGEF3-214ENST00000495465 LAMB2P55268 1798 aa18.81■□□□□ 0.6
RAPGEF3-214ENST00000495465 SLC4A2P04920 1241 aa18.81■□□□□ 0.6
RAPGEF3-214ENST00000495465 PCCAP05165 728 aaPredicted RBP18.81■□□□□ 0.6
RAPGEF3-214ENST00000495465 HSP90B1P14625 803 aaKnown RBP18.81■□□□□ 0.6
RAPGEF3-214ENST00000495465 RPS8P62241 208 aaKnown RBP18.81■□□□□ 0.6
RAPGEF3-214ENST00000495465 MAP1SQ66K74 1059 aaPredicted RBP18.81■□□□□ 0.6
RAPGEF3-214ENST00000495465 G2E3Q7L622 706 aa18.81■□□□□ 0.6
RAPGEF3-214ENST00000495465 CCDC85AQ96PX6 553 aaPredicted RBP18.81■□□□□ 0.6
RAPGEF3-214ENST00000495465 SCN4AP35499 1836 aa18.81■□□□□ 0.6
RAPGEF3-214ENST00000495465 RAD17O75943 681 aa18.8■□□□□ 0.6
RAPGEF3-214ENST00000495465 ITGBL1O95965 494 aaPredicted RBP18.8■□□□□ 0.6
RAPGEF3-214ENST00000495465 WDR63Q8IWG1 891 aa18.8■□□□□ 0.6
RAPGEF3-214ENST00000495465 CNTROBQ8N137 903 aa18.8■□□□□ 0.6
RAPGEF3-214ENST00000495465 SEC31BQ9NQW1 1179 aa18.8■□□□□ 0.6
RAPGEF3-214ENST00000495465 CREBZFQ9NS37 354 aa18.8■□□□□ 0.6
RAPGEF3-214ENST00000495465 PASKQ96RG2 1323 aa18.79■□□□□ 0.6
RAPGEF3-214ENST00000495465 FANCIQ9NVI1 1328 aa18.79■□□□□ 0.6
RAPGEF3-214ENST00000495465 C6orf229H3BNL8 230 aa18.79■□□□□ 0.6
RAPGEF3-214ENST00000495465 PDE8AO60658 829 aa18.79■□□□□ 0.6
RAPGEF3-214ENST00000495465 IGKV5-2P06315 115 aa18.79■□□□□ 0.6
RAPGEF3-214ENST00000495465 GPSM2P81274 684 aa18.79■□□□□ 0.6
RAPGEF3-214ENST00000495465 CIAPIN1Q6FI81 312 aa18.79■□□□□ 0.6
RAPGEF3-214ENST00000495465 TAF1P21675 1872 aa18.78■□□□□ 0.6
RAPGEF3-214ENST00000495465 DDX60Q8IY21 1712 aaKnown RBP18.78■□□□□ 0.6
RAPGEF3-214ENST00000495465 RIMBP2O15034 1052 aa18.78■□□□□ 0.6
RAPGEF3-214ENST00000495465 GMPSP49915 693 aaPredicted RBP18.78■□□□□ 0.6
RAPGEF3-214ENST00000495465 NEXNQ0ZGT2 675 aa18.78■□□□□ 0.6
RAPGEF3-214ENST00000495465 WASHC4Q2M389 1173 aa18.78■□□□□ 0.6
RAPGEF3-214ENST00000495465 CCDC152Q4G0S7 254 aa18.78■□□□□ 0.6
RAPGEF3-214ENST00000495465 POLLQ9UGP5 575 aa18.78■□□□□ 0.6
RAPGEF3-214ENST00000495465 MKRN1Q9UHC7 482 aaKnown RBP18.78■□□□□ 0.6
RAPGEF3-214ENST00000495465 EXOSC9Q06265 439 aaKnown RBP18.77■□□□□ 0.6
RAPGEF3-214ENST00000495465 CWF19L2Q2TBE0 894 aaKnown RBP18.77■□□□□ 0.6
RAPGEF3-214ENST00000495465 TMEM88BA6NKF7 163 aa18.76■□□□□ 0.59
RAPGEF3-214ENST00000495465 YDJCA8MPS7 323 aa18.76■□□□□ 0.59
RAPGEF3-214ENST00000495465 TNIP1Q15025 636 aa18.76■□□□□ 0.59
RAPGEF3-214ENST00000495465 USP50Q70EL3 339 aaPredicted RBP18.76■□□□□ 0.59
RAPGEF3-214ENST00000495465 GPR101Q96P66 508 aaPredicted RBP18.76■□□□□ 0.59
RAPGEF3-214ENST00000495465 BCL2L13Q9BXK5 485 aa18.76■□□□□ 0.59
RAPGEF3-214ENST00000495465 GPRC5DQ9NZD1 345 aa18.76■□□□□ 0.59
RAPGEF3-214ENST00000495465 VAMP4O75379 141 aa18.75■□□□□ 0.59
RAPGEF3-214ENST00000495465 FLIIQ13045 1269 aa18.75■□□□□ 0.59
RAPGEF3-214ENST00000495465 TBC1D16Q8TBP0 767 aa18.75■□□□□ 0.59
RAPGEF3-214ENST00000495465 DBNDD1Q9H9R9 158 aa18.75■□□□□ 0.59
RAPGEF3-214ENST00000495465 SPINK5Q9NQ38 1064 aaPredicted RBP18.75■□□□□ 0.59
RAPGEF3-214ENST00000495465 ADARB2Q9NS39 739 aaKnown RBP18.75■□□□□ 0.59
RAPGEF3-214ENST00000495465 ANKIB1Q9P2G1 1089 aa18.75■□□□□ 0.59
RAPGEF3-214ENST00000495465 COL4A1P02462 1669 aa18.74■□□□□ 0.59
RAPGEF3-214ENST00000495465 NEURL1BA8MQ27 555 aa18.74■□□□□ 0.59
RAPGEF3-214ENST00000495465 FKBP5Q13451 457 aaPredicted RBP18.74■□□□□ 0.59
RAPGEF3-214ENST00000495465 DOK7Q18PE1 504 aa18.74■□□□□ 0.59
RAPGEF3-214ENST00000495465 EYA3Q99504 573 aa18.74■□□□□ 0.59
RAPGEF3-214ENST00000495465 CDHR2Q9BYE9 1310 aa18.74■□□□□ 0.59
RAPGEF3-214ENST00000495465 CTSWP56202 376 aa18.73■□□□□ 0.59
RAPGEF3-214ENST00000495465 ANKRD18AQ8IVF6 992 aa18.73■□□□□ 0.59
RAPGEF3-214ENST00000495465 LTBP1Q14766 1721 aa18.73■□□□□ 0.59
RAPGEF3-214ENST00000495465 DUOX1Q9NRD9 1551 aa18.72■□□□□ 0.59
RAPGEF3-214ENST00000495465 UFL1O94874 794 aa18.72■□□□□ 0.59
RAPGEF3-214ENST00000495465 FMR1Q06787 632 aaKnown RBP eCLIP18.72■□□□□ 0.59
RAPGEF3-214ENST00000495465 IFFO2Q5TF58 517 aa18.72■□□□□ 0.59
RAPGEF3-214ENST00000495465 UBE3BQ7Z3V4 1068 aa18.72■□□□□ 0.59
RAPGEF3-214ENST00000495465 TTLL11Q8NHH1 800 aa18.72■□□□□ 0.59
RAPGEF3-214ENST00000495465 ZC3H12CQ9C0D7 883 aaKnown RBP18.72■□□□□ 0.59
RAPGEF3-214ENST00000495465 KCNQ5Q9NR82 932 aa18.72■□□□□ 0.59
RAPGEF3-214ENST00000495465 CNOT7Q9UIV1 285 aaKnown RBP18.72■□□□□ 0.59
RAPGEF3-214ENST00000495465 GGA1Q9UJY5 639 aa18.72■□□□□ 0.59
RAPGEF3-214ENST00000495465 ZBTB12Q9Y330 459 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms