RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 MTX1Q13505 466 aa20.06■□□□□ 0.8
CBX4-204ENST00000495122 HSP90AB4PQ58FF6 505 aa20.06■□□□□ 0.8
CBX4-204ENST00000495122 LINS1Q8NG48 757 aa20.06■□□□□ 0.8
CBX4-204ENST00000495122 OSBPL3Q9H4L5 887 aa20.06■□□□□ 0.8
CBX4-204ENST00000495122 NMRK2Q9NPI5 230 aa20.06■□□□□ 0.8
CBX4-204ENST00000495122 ZNF652Q9Y2D9 606 aa20.06■□□□□ 0.8
CBX4-204ENST00000495122 ZC3H4Q9UPT8 1303 aaKnown RBP20.05■□□□□ 0.8
CBX4-204ENST00000495122 PRELPP51888 382 aa20.05■□□□□ 0.8
CBX4-204ENST00000495122 ST5P78524 1137 aa20.05■□□□□ 0.8
CBX4-204ENST00000495122 PDIA6Q15084 440 aa20.05■□□□□ 0.8
CBX4-204ENST00000495122 PLEKHM2Q8IWE5 1019 aa20.05■□□□□ 0.8
CBX4-204ENST00000495122 DAXXQ9UER7 740 aaPredicted RBP20.05■□□□□ 0.8
CBX4-204ENST00000495122 UTYO14607 1347 aa20.04■□□□□ 0.8
CBX4-204ENST00000495122 HSPA6P17066 643 aa20.04■□□□□ 0.8
CBX4-204ENST00000495122 POLA2Q14181 598 aa20.04■□□□□ 0.8
CBX4-204ENST00000495122 LRRFIP2Q9Y608 721 aaKnown RBP20.04■□□□□ 0.8
CBX4-204ENST00000495122 AOX1Q06278 1338 aa20.03■□□□□ 0.8
CBX4-204ENST00000495122 NFKBIEO00221 500 aa20.03■□□□□ 0.8
CBX4-204ENST00000495122 BECN1Q14457 450 aa20.03■□□□□ 0.8
CBX4-204ENST00000495122 TTC22Q5TAA0 569 aa20.03■□□□□ 0.8
CBX4-204ENST00000495122 ZNF622Q969S3 477 aaKnown RBP eCLIP20.03■□□□□ 0.88e-7■■□□□ 12.9
CBX4-204ENST00000495122 LRRCC1Q9C099 1032 aa20.03■□□□□ 0.8
CBX4-204ENST00000495122 MAP3K2Q9Y2U5 619 aa20.03■□□□□ 0.8
CBX4-204ENST00000495122 NPHP1O15259 732 aa20.02■□□□□ 0.8
CBX4-204ENST00000495122 CDC45O75419 566 aa20.02■□□□□ 0.8
CBX4-204ENST00000495122 LMNB1P20700 586 aa20.02■□□□□ 0.8
CBX4-204ENST00000495122 NEXNQ0ZGT2 675 aa20.02■□□□□ 0.8
CBX4-204ENST00000495122 TOMM70O94826 608 aa20.01■□□□□ 0.79
CBX4-204ENST00000495122 SRGNP10124 158 aa20.01■□□□□ 0.79
CBX4-204ENST00000495122 HLFQ16534 295 aa20.01■□□□□ 0.79
CBX4-204ENST00000495122 STYK1Q6J9G0 422 aa20.01■□□□□ 0.79
CBX4-204ENST00000495122 NBPF5PQ86XG9 351 aaPredicted RBP20.01■□□□□ 0.79
CBX4-204ENST00000495122 NIP7Q9Y221 180 aaKnown RBP eCLIP20.01■□□□□ 0.79
CBX4-204ENST00000495122 SCN4AP35499 1836 aa20.01■□□□□ 0.79
CBX4-204ENST00000495122 SEC24BO95487 1268 aa20■□□□□ 0.79
CBX4-204ENST00000495122 PROSER3Q2NL68 480 aa20■□□□□ 0.79
CBX4-204ENST00000495122 CASC1Q6TDU7 716 aa19.99■□□□□ 0.79
CBX4-204ENST00000495122 MASTLQ96GX5 879 aa19.99■□□□□ 0.79
CBX4-204ENST00000495122 C9orf78Q9NZ63 289 aaPredicted RBP19.99■□□□□ 0.79
CBX4-204ENST00000495122 MAP3K15Q6ZN16 1313 aa19.99■□□□□ 0.79
CBX4-204ENST00000495122 DDX60Q8IY21 1712 aaKnown RBP19.99■□□□□ 0.79
CBX4-204ENST00000495122 C21orf2O43822 256 aa19.98■□□□□ 0.79
CBX4-204ENST00000495122 PRPF40BQ6NWY9 871 aaKnown RBP19.98■□□□□ 0.79
CBX4-204ENST00000495122 LRP10Q7Z4F1 713 aa19.98■□□□□ 0.79
CBX4-204ENST00000495122 CNKSR1Q969H4 720 aa19.98■□□□□ 0.79
CBX4-204ENST00000495122 METTL22Q9BUU2 404 aaPredicted RBP19.98■□□□□ 0.79
CBX4-204ENST00000495122 C22orf23Q9BZE7 217 aa19.98■□□□□ 0.79
CBX4-204ENST00000495122 RIC1Q4ADV7 1423 aa19.98■□□□□ 0.79
CBX4-204ENST00000495122 TAF1P21675 1872 aa19.98■□□□□ 0.79
CBX4-204ENST00000495122 LTBP3Q9NS15 1303 aa19.98■□□□□ 0.79
CBX4-204ENST00000495122 PNMA6EA0A0J9YXQ4 647 aa19.97■□□□□ 0.79
CBX4-204ENST00000495122 ERVV-1B6SEH8 477 aa19.97■□□□□ 0.79
CBX4-204ENST00000495122 GRM8O00222 908 aa19.97■□□□□ 0.79
CBX4-204ENST00000495122 ANXA1P04083 346 aa19.97■□□□□ 0.79
CBX4-204ENST00000495122 RBM25P49756 843 aaKnown RBP19.97■□□□□ 0.79
CBX4-204ENST00000495122 TTLL7Q6ZT98 887 aa19.97■□□□□ 0.79
CBX4-204ENST00000495122 RIC3Q7Z5B4 369 aa19.97■□□□□ 0.79
CBX4-204ENST00000495122 ZNF219Q9P2Y4 722 aaPredicted RBP19.97■□□□□ 0.79
CBX4-204ENST00000495122 STAP2Q9UGK3 403 aa19.97■□□□□ 0.79
CBX4-204ENST00000495122 SALL3Q9BXA9 1300 aa19.97■□□□□ 0.79
CBX4-204ENST00000495122 ABCC12Q96J65 1359 aa19.96■□□□□ 0.79
CBX4-204ENST00000495122 KLRG2A4D1S0 409 aaPredicted RBP19.96■□□□□ 0.79
CBX4-204ENST00000495122 TPTE2Q6XPS3 522 aa19.96■□□□□ 0.79
CBX4-204ENST00000495122 ANKRD13DQ6ZTN6 518 aa19.96■□□□□ 0.79
CBX4-204ENST00000495122 PPP1R42Q7Z4L9 355 aa19.96■□□□□ 0.79
CBX4-204ENST00000495122 ERC1Q8IUD2 1116 aa19.96■□□□□ 0.79
CBX4-204ENST00000495122 RBM46Q8TBY0 533 aaKnown RBP19.96■□□□□ 0.79
CBX4-204ENST00000495122 KIF1BPQ96EK5 621 aa19.96■□□□□ 0.79
CBX4-204ENST00000495122 NBPF7P0C2Y1 421 aaPredicted RBP19.95■□□□□ 0.78
CBX4-204ENST00000495122 MYL6BP14649 208 aa19.95■□□□□ 0.78
CBX4-204ENST00000495122 KIF6Q6ZMV9 814 aa19.95■□□□□ 0.78
CBX4-204ENST00000495122 PLBD2Q8NHP8 589 aa19.95■□□□□ 0.78
CBX4-204ENST00000495122 XAGE3Q8WTP9 111 aa19.95■□□□□ 0.78
CBX4-204ENST00000495122 GLTPD2A6NH11 291 aa19.94■□□□□ 0.78
CBX4-204ENST00000495122 FAM177BA6PVY3 158 aa19.94■□□□□ 0.78
CBX4-204ENST00000495122 SRGAP3O43295 1099 aa19.94■□□□□ 0.78
CBX4-204ENST00000495122 GSPT1P15170 499 aaKnown RBP19.94■□□□□ 0.78
CBX4-204ENST00000495122 NPR1P16066 1061 aa19.94■□□□□ 0.78
CBX4-204ENST00000495122 PDE1AP54750 535 aa19.94■□□□□ 0.78
CBX4-204ENST00000495122 MFAP1P55081 439 aaKnown RBP19.94■□□□□ 0.78
CBX4-204ENST00000495122 TBC1D9Q6ZT07 1266 aa19.94■□□□□ 0.78
CBX4-204ENST00000495122 COPS6Q7L5N1 327 aa19.94■□□□□ 0.78
CBX4-204ENST00000495122 C16orf71Q8IYS4 520 aaPredicted RBP19.94■□□□□ 0.78
CBX4-204ENST00000495122 RRAGCQ9HB90 399 aa19.94■□□□□ 0.78
CBX4-204ENST00000495122 EXOC6BQ9Y2D4 811 aa19.94■□□□□ 0.78
CBX4-204ENST00000495122 SOGA3Q5TF21 947 aa19.93■□□□□ 0.78
CBX4-204ENST00000495122 TAOK3Q9H2K8 898 aa19.93■□□□□ 0.78
CBX4-204ENST00000495122 UBN2Q6ZU65 1347 aa19.93■□□□□ 0.78
CBX4-204ENST00000495122 SNED1Q8TER0 1413 aa19.93■□□□□ 0.78
CBX4-204ENST00000495122 NEURL1BA8MQ27 555 aa19.92■□□□□ 0.78
CBX4-204ENST00000495122 MX1P20591 662 aa19.92■□□□□ 0.78
CBX4-204ENST00000495122 C7orf43Q8WVR3 580 aa19.92■□□□□ 0.78
CBX4-204ENST00000495122 NYXQ9GZU5 481 aa19.92■□□□□ 0.78
CBX4-204ENST00000495122 ZBTB3Q9H5J0 574 aa19.92■□□□□ 0.78
CBX4-204ENST00000495122 APLP1P51693 650 aa19.91■□□□□ 0.78
CBX4-204ENST00000495122 GCKRQ14397 625 aa19.91■□□□□ 0.78
CBX4-204ENST00000495122 SMARCA5O60264 1052 aaPredicted RBP19.9■□□□□ 0.78
CBX4-204ENST00000495122 SURF6O75683 361 aaKnown RBP19.9■□□□□ 0.78
CBX4-204ENST00000495122 IGKV5-2P06315 115 aa19.9■□□□□ 0.78
CBX4-204ENST00000495122 FSTL1Q12841 308 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms