RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 SAPCD2Q86UD0 394 aa18.7■□□□□ 0.58
VARS-228ENST00000495010 GLIS2Q9BZE0 524 aaPredicted RBP18.7■□□□□ 0.58
VARS-228ENST00000495010 TRMT112Q9UI30 125 aaKnown RBP18.7■□□□□ 0.58
VARS-228ENST00000495010 THSD7BQ9C0I4 1608 aa18.7■□□□□ 0.58
VARS-228ENST00000495010 CDHR2Q9BYE9 1310 aa18.7■□□□□ 0.58
VARS-228ENST00000495010 CA12O43570 354 aa18.69■□□□□ 0.58
VARS-228ENST00000495010 RAD17O75943 681 aa18.69■□□□□ 0.58
VARS-228ENST00000495010 ANXA1P04083 346 aa18.69■□□□□ 0.58
VARS-228ENST00000495010 KIAA2012Q0VF49 1180 aa18.69■□□□□ 0.58
VARS-228ENST00000495010 COPS6Q7L5N1 327 aa18.69■□□□□ 0.58
VARS-228ENST00000495010 ZC3H15Q8WU90 426 aaKnown RBP18.69■□□□□ 0.58
VARS-228ENST00000495010 NECTIN2Q92692 538 aa18.69■□□□□ 0.58
VARS-228ENST00000495010 TSKSQ9UJT2 592 aa18.69■□□□□ 0.58
VARS-228ENST00000495010 H7C1D1 291 aa18.68■□□□□ 0.58
VARS-228ENST00000495010 GRAPQ13588 217 aa18.68■□□□□ 0.58
VARS-228ENST00000495010 PROSER3Q2NL68 480 aa18.68■□□□□ 0.58
VARS-228ENST00000495010 CDC37L1Q7L3B6 337 aa18.68■□□□□ 0.58
VARS-228ENST00000495010 LRP10Q7Z4F1 713 aa18.68■□□□□ 0.58
VARS-228ENST00000495010 NLRP10Q86W26 655 aa18.68■□□□□ 0.58
VARS-228ENST00000495010 GRAPLQ8TC17 118 aaPredicted RBP18.68■□□□□ 0.58
VARS-228ENST00000495010 BABAM1Q9NWV8 329 aa18.68■□□□□ 0.58
VARS-228ENST00000495010 LMOD3Q0VAK6 560 aa18.67■□□□□ 0.58
VARS-228ENST00000495010 TMC4Q7Z404 712 aa18.67■□□□□ 0.58
VARS-228ENST00000495010 XAGE3Q8WTP9 111 aa18.67■□□□□ 0.58
VARS-228ENST00000495010 HHIPL1Q96JK4 782 aa18.67■□□□□ 0.58
VARS-228ENST00000495010 CFAP44Q96MT7 982 aa18.67■□□□□ 0.58
VARS-228ENST00000495010 PGAP2Q9UHJ9 254 aa18.67■□□□□ 0.58
VARS-228ENST00000495010 CNOT7Q9UIV1 285 aaKnown RBP18.67■□□□□ 0.58
VARS-228ENST00000495010 SH3TC1Q8TE82 1336 aa18.67■□□□□ 0.58
VARS-228ENST00000495010 MLLT1Q03111 559 aaPredicted RBP18.66■□□□□ 0.58
VARS-228ENST00000495010 TCIRG1Q13488 830 aa18.66■□□□□ 0.58
VARS-228ENST00000495010 BRPF1P55201 1214 aaPredicted RBP18.65■□□□□ 0.58
VARS-228ENST00000495010 HIRAP54198 1017 aaPredicted RBP18.64■□□□□ 0.57
VARS-228ENST00000495010 TRPM4Q8TD43 1214 aa18.64■□□□□ 0.57
VARS-228ENST00000495010 ANKRD36CQ5JPF3 1778 aa18.63■□□□□ 0.57
VARS-228ENST00000495010 WASHC4Q2M389 1173 aa18.63■□□□□ 0.57
VARS-228ENST00000495010 USP48Q86UV5 1035 aa18.63■□□□□ 0.57
VARS-228ENST00000495010 MICALL2Q8IY33 904 aa18.63■□□□□ 0.57
VARS-228ENST00000495010 LAMB2P55268 1798 aa18.63■□□□□ 0.57
VARS-228ENST00000495010 NOGQ13253 232 aa18.62■□□□□ 0.57
VARS-228ENST00000495010 NSFL1CQ9UNZ2 370 aaKnown RBP18.62■□□□□ 0.57
VARS-228ENST00000495010 LAS1LQ9Y4W2 734 aaKnown RBP18.62■□□□□ 0.57
VARS-228ENST00000495010 YDJCA8MPS7 323 aa18.61■□□□□ 0.57
VARS-228ENST00000495010 C6orf229H3BNL8 230 aa18.61■□□□□ 0.57
VARS-228ENST00000495010 TMPOP42166 694 aaKnown RBP18.61■□□□□ 0.57
VARS-228ENST00000495010 HUNKP57058 714 aa18.61■□□□□ 0.57
VARS-228ENST00000495010 ZNF428Q96B54 188 aa18.61■□□□□ 0.57
VARS-228ENST00000495010 MCOLN1Q9GZU1 580 aa18.61■□□□□ 0.57
VARS-228ENST00000495010 ZBTB12Q9Y330 459 aaPredicted RBP18.61■□□□□ 0.57
VARS-228ENST00000495010 SHTN1A0MZ66 631 aa18.6■□□□□ 0.57
VARS-228ENST00000495010 RIMBP2O15034 1052 aa18.6■□□□□ 0.57
VARS-228ENST00000495010 DGKZQ13574 1117 aa18.6■□□□□ 0.57
VARS-228ENST00000495010 NEUROD2Q15784 382 aa18.6■□□□□ 0.57
VARS-228ENST00000495010 DPF2Q92785 391 aa18.6■□□□□ 0.57
VARS-228ENST00000495010 DBNDD1Q9H9R9 158 aa18.6■□□□□ 0.57
VARS-228ENST00000495010 PSMD14O00487 310 aa18.59■□□□□ 0.57
VARS-228ENST00000495010 RGS19P49795 217 aa18.59■□□□□ 0.57
VARS-228ENST00000495010 SAMD7Q7Z3H4 446 aa18.59■□□□□ 0.57
VARS-228ENST00000495010 KRT26Q7Z3Y9 468 aa18.59■□□□□ 0.57
VARS-228ENST00000495010 PLBD2Q8NHP8 589 aa18.59■□□□□ 0.57
VARS-228ENST00000495010 DCPSQ96C86 337 aaKnown RBP18.59■□□□□ 0.57
VARS-228ENST00000495010 EYA3Q99504 573 aa18.59■□□□□ 0.57
VARS-228ENST00000495010 CHPF2Q9P2E5 772 aa18.59■□□□□ 0.57
VARS-228ENST00000495010 TBC1D10BQ4KMP7 808 aaPredicted RBP18.58■□□□□ 0.56
VARS-228ENST00000495010 RBM26Q5T8P6 1007 aaKnown RBP18.58■□□□□ 0.56
VARS-228ENST00000495010 HDGFL1Q5TGJ6 251 aa18.58■□□□□ 0.56
VARS-228ENST00000495010 ANKRD13DQ6ZTN6 518 aa18.58■□□□□ 0.56
VARS-228ENST00000495010 C2orf69Q8N8R5 385 aa18.58■□□□□ 0.56
VARS-228ENST00000495010 FAM89AQ96GI7 184 aa18.58■□□□□ 0.56
VARS-228ENST00000495010 G3V3G9 751 aa18.57■□□□□ 0.56
VARS-228ENST00000495010 RPS12P25398 132 aaKnown RBP18.57■□□□□ 0.56
VARS-228ENST00000495010 RALBP1Q15311 655 aa18.57■□□□□ 0.56
VARS-228ENST00000495010 DCAF8Q5TAQ9 597 aa18.57■□□□□ 0.56
VARS-228ENST00000495010 RGMBQ6NW40 437 aa18.57■□□□□ 0.56
VARS-228ENST00000495010 CELF1Q92879 486 aaKnown RBP18.57■□□□□ 0.56
VARS-228ENST00000495010 GBA2Q9HCG7 927 aaPredicted RBP18.57■□□□□ 0.56
VARS-228ENST00000495010 TAF1P21675 1872 aa18.56■□□□□ 0.56
VARS-228ENST00000495010 ATP5J2-PTCD1G3V325 749 aa18.56■□□□□ 0.56
VARS-228ENST00000495010 CHL1O00533 1208 aa18.56■□□□□ 0.56
VARS-228ENST00000495010 ECE2O60344 883 aa18.56■□□□□ 0.56
VARS-228ENST00000495010 SLC34A2O95436 690 aa18.56■□□□□ 0.56
VARS-228ENST00000495010 GPSM2P81274 684 aa18.56■□□□□ 0.56
VARS-228ENST00000495010 SF3B3Q15393 1217 aaKnown RBP18.56■□□□□ 0.56
VARS-228ENST00000495010 DOK7Q18PE1 504 aa18.56■□□□□ 0.56
VARS-228ENST00000495010 KRT24Q2M2I5 525 aa18.56■□□□□ 0.56
VARS-228ENST00000495010 DBF4Q9UBU7 674 aaPredicted RBP18.56■□□□□ 0.56
VARS-228ENST00000495010 DUOX1Q9NRD9 1551 aa18.55■□□□□ 0.56
VARS-228ENST00000495010 CASP8AP2Q9UKL3 1982 aa18.55■□□□□ 0.56
VARS-228ENST00000495010 RTL5Q5HYW3 569 aaPredicted RBP18.55■□□□□ 0.56
VARS-228ENST00000495010 CCDC146Q8IYE0 955 aa18.55■□□□□ 0.56
VARS-228ENST00000495010 CCDC102AQ96A19 550 aa18.55■□□□□ 0.56
VARS-228ENST00000495010 ISCA1Q9BUE6 129 aa18.55■□□□□ 0.56
VARS-228ENST00000495010 POLLQ9UGP5 575 aa18.55■□□□□ 0.56
VARS-228ENST00000495010 HOXB7P09629 217 aa18.54■□□□□ 0.56
VARS-228ENST00000495010 ZNF157P51786 506 aaPredicted RBP18.54■□□□□ 0.56
VARS-228ENST00000495010 DLK2Q6UY11 383 aa18.54■□□□□ 0.56
VARS-228ENST00000495010 ZIC5Q96T25 663 aa18.54■□□□□ 0.56
VARS-228ENST00000495010 ZC3H12CQ9C0D7 883 aaKnown RBP18.54■□□□□ 0.56
VARS-228ENST00000495010 HYPKQ9NX55 129 aa18.54■□□□□ 0.56
VARS-228ENST00000495010 LRRC37AA6NMS7 1700 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms