RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 PI4KAP1Q8N8J0 262 aa13.67□□□□□ -0.22
NELFE-213ENST00000494956 SMC1BQ8NDV3 1235 aa13.67□□□□□ -0.22
NELFE-213ENST00000494956 GRAPLQ8TC17 118 aaPredicted RBP13.67□□□□□ -0.22
NELFE-213ENST00000494956 CCDC85AQ96PX6 553 aaPredicted RBP13.67□□□□□ -0.22
NELFE-213ENST00000494956 IGKV5-2P06315 115 aa13.66□□□□□ -0.22
NELFE-213ENST00000494956 APLP1P51693 650 aa13.66□□□□□ -0.22
NELFE-213ENST00000494956 FSTL1Q12841 308 aa13.66□□□□□ -0.22
NELFE-213ENST00000494956 CWF19L2Q2TBE0 894 aaKnown RBP13.66□□□□□ -0.22
NELFE-213ENST00000494956 CC2D2BQ6DHV5 1058 aa13.66□□□□□ -0.22
NELFE-213ENST00000494956 WDR63Q8IWG1 891 aa13.66□□□□□ -0.22
NELFE-213ENST00000494956 STK31Q9BXU1 1019 aa13.66□□□□□ -0.22
NELFE-213ENST00000494956 SEC31BQ9NQW1 1179 aa13.66□□□□□ -0.22
NELFE-213ENST00000494956 LRRC37AA6NMS7 1700 aa13.66□□□□□ -0.22
NELFE-213ENST00000494956 LTBP1Q14766 1721 aa13.66□□□□□ -0.22
NELFE-213ENST00000494956 SCN4AP35499 1836 aa13.66□□□□□ -0.22
NELFE-213ENST00000494956 DUOX1Q9NRD9 1551 aa13.66□□□□□ -0.22
NELFE-213ENST00000494956 CEP350Q5VT06 3117 aa13.65□□□□□ -0.22
NELFE-213ENST00000494956 PPIP5K2O43314 1243 aa13.65□□□□□ -0.22
NELFE-213ENST00000494956 VAMP4O75379 141 aa13.65□□□□□ -0.22
NELFE-213ENST00000494956 SF3B3Q15393 1217 aaKnown RBP13.65□□□□□ -0.22
NELFE-213ENST00000494956 KSR2Q6VAB6 950 aa13.65□□□□□ -0.22
NELFE-213ENST00000494956 SP8Q8IXZ3 490 aa13.65□□□□□ -0.22
NELFE-213ENST00000494956 ZBTB38Q8NAP3 1195 aaPredicted RBP13.65□□□□□ -0.22
NELFE-213ENST00000494956 JDP2Q8WYK2 163 aa13.65□□□□□ -0.22
NELFE-213ENST00000494956 GJA3Q9Y6H8 435 aa13.65□□□□□ -0.22
NELFE-213ENST00000494956 BBOX1O75936 387 aa13.64□□□□□ -0.23
NELFE-213ENST00000494956 DDX58O95786 925 aaKnown RBP13.64□□□□□ -0.23
NELFE-213ENST00000494956 PCCAP05165 728 aaPredicted RBP13.64□□□□□ -0.23
NELFE-213ENST00000494956 DPP8Q6V1X1 898 aaPredicted RBP13.64□□□□□ -0.23
NELFE-213ENST00000494956 MPNDQ8N594 471 aa13.64□□□□□ -0.23
NELFE-213ENST00000494956 DNAJC5GQ8N7S2 189 aa13.64□□□□□ -0.23
NELFE-213ENST00000494956 L3MBTL3Q96JM7 780 aaPredicted RBP13.64□□□□□ -0.23
NELFE-213ENST00000494956 TAF1DQ9H5J8 278 aaPredicted RBP13.64□□□□□ -0.23
NELFE-213ENST00000494956 CWC25Q9NXE8 425 aaPredicted RBP13.64□□□□□ -0.23
NELFE-213ENST00000494956 SPEF2Q9C093 1822 aa13.64□□□□□ -0.23
NELFE-213ENST00000494956 EAPPQ56P03 285 aaPredicted RBP13.63□□□□□ -0.23
NELFE-213ENST00000494956 NIM1KQ8IY84 436 aa13.63□□□□□ -0.23
NELFE-213ENST00000494956 CCDC191Q8NCU4 936 aa13.63□□□□□ -0.23
NELFE-213ENST00000494956 GPR101Q96P66 508 aaPredicted RBP13.63□□□□□ -0.23
NELFE-213ENST00000494956 RTFDC1Q9BY42 306 aaPredicted RBP13.63□□□□□ -0.23
NELFE-213ENST00000494956 MYH3P11055 1940 aa13.62□□□□□ -0.23
NELFE-213ENST00000494956 CACNA1FO60840 1977 aa13.62□□□□□ -0.23
NELFE-213ENST00000494956 EIF6P56537 245 aaKnown RBP13.62□□□□□ -0.23
NELFE-213ENST00000494956 GPSM2P81274 684 aa13.62□□□□□ -0.23
NELFE-213ENST00000494956 FLIIQ13045 1269 aa13.62□□□□□ -0.23
NELFE-213ENST00000494956 TMX4Q9H1E5 349 aaPredicted RBP13.62□□□□□ -0.23
NELFE-213ENST00000494956 HACL1Q9UJ83 578 aa13.62□□□□□ -0.23
NELFE-213ENST00000494956 ADAMTSL1Q8N6G6 1762 aa13.61□□□□□ -0.23
NELFE-213ENST00000494956 IQCA1LA6NCM1 817 aa13.61□□□□□ -0.23
NELFE-213ENST00000494956 NEURL1BA8MQ27 555 aa13.61□□□□□ -0.23
NELFE-213ENST00000494956 F6X3S4 739 aa13.61□□□□□ -0.23
NELFE-213ENST00000494956 PDE8AO60658 829 aa13.61□□□□□ -0.23
NELFE-213ENST00000494956 EPHX2P34913 555 aa13.61□□□□□ -0.23
NELFE-213ENST00000494956 EPS15P42566 896 aa13.61□□□□□ -0.23
NELFE-213ENST00000494956 FKBP5Q13451 457 aaPredicted RBP13.61□□□□□ -0.23
NELFE-213ENST00000494956 GRIPAP1Q4V328 841 aa13.61□□□□□ -0.23
NELFE-213ENST00000494956 CHADLQ6NUI6 762 aa13.61□□□□□ -0.23
NELFE-213ENST00000494956 GPC2Q8N158 579 aa13.61□□□□□ -0.23
NELFE-213ENST00000494956 NSFL1CQ9UNZ2 370 aaKnown RBP13.61□□□□□ -0.23
NELFE-213ENST00000494956 ZNF521Q96K83 1311 aa13.61□□□□□ -0.23
NELFE-213ENST00000494956 YDJCA8MPS7 323 aa13.6□□□□□ -0.23
NELFE-213ENST00000494956 RIMBP2O15034 1052 aa13.6□□□□□ -0.23
NELFE-213ENST00000494956 RAD17O75943 681 aa13.6□□□□□ -0.23
NELFE-213ENST00000494956 SCNN1DP51172 638 aa13.6□□□□□ -0.23
NELFE-213ENST00000494956 RPS8P62241 208 aaKnown RBP13.6□□□□□ -0.23
NELFE-213ENST00000494956 CXCL9Q07325 125 aa13.6□□□□□ -0.23
NELFE-213ENST00000494956 POLLQ9UGP5 575 aa13.6□□□□□ -0.23
NELFE-213ENST00000494956 CLEC11AQ9Y240 323 aa13.6□□□□□ -0.23
NELFE-213ENST00000494956 KIAA2012Q0VF49 1180 aa13.59□□□□□ -0.23
NELFE-213ENST00000494956 NEXNQ0ZGT2 675 aa13.59□□□□□ -0.23
NELFE-213ENST00000494956 UBE3BQ7Z3V4 1068 aa13.59□□□□□ -0.23
NELFE-213ENST00000494956 SUPT20HQ8NEM7 779 aa13.59□□□□□ -0.23
NELFE-213ENST00000494956 DNAAF4Q8WXU2 420 aa13.59□□□□□ -0.23
NELFE-213ENST00000494956 CHMP4AQ9BY43 222 aa13.59□□□□□ -0.23
NELFE-213ENST00000494956 DBNDD1Q9H9R9 158 aa13.59□□□□□ -0.23
NELFE-213ENST00000494956 CDHR2Q9BYE9 1310 aa13.59□□□□□ -0.23
NELFE-213ENST00000494956 SHTN1A0MZ66 631 aa13.58□□□□□ -0.24
NELFE-213ENST00000494956 WTIPA6NIX2 430 aaPredicted RBP13.58□□□□□ -0.24
NELFE-213ENST00000494956 C6orf229H3BNL8 230 aa13.58□□□□□ -0.24
NELFE-213ENST00000494956 H7C1W4 665 aa13.58□□□□□ -0.24
NELFE-213ENST00000494956 CTSWP56202 376 aa13.58□□□□□ -0.24
NELFE-213ENST00000494956 FMR1Q06787 632 aaKnown RBP eCLIP13.58□□□□□ -0.24
NELFE-213ENST00000494956 MAP1SQ66K74 1059 aaPredicted RBP13.58□□□□□ -0.24
NELFE-213ENST00000494956 LDHDQ86WU2 507 aa13.58□□□□□ -0.24
NELFE-213ENST00000494956 MYH16Q9H6N6 1097 aa13.58□□□□□ -0.24
NELFE-213ENST00000494956 KCNQ5Q9NR82 932 aa13.58□□□□□ -0.24
NELFE-213ENST00000494956 ZNRF3Q9ULT6 936 aa13.58□□□□□ -0.24
NELFE-213ENST00000494956 GCKRQ14397 625 aa13.57□□□□□ -0.24
NELFE-213ENST00000494956 DOK7Q18PE1 504 aa13.57□□□□□ -0.24
NELFE-213ENST00000494956 WASHC4Q2M389 1173 aa13.57□□□□□ -0.24
NELFE-213ENST00000494956 CCDC152Q4G0S7 254 aa13.57□□□□□ -0.24
NELFE-213ENST00000494956 TMC4Q7Z404 712 aa13.57□□□□□ -0.24
NELFE-213ENST00000494956 TTLL11Q8NHH1 800 aa13.57□□□□□ -0.24
NELFE-213ENST00000494956 TBC1D16Q8TBP0 767 aa13.57□□□□□ -0.24
NELFE-213ENST00000494956 KLRG1Q96E93 195 aa13.57□□□□□ -0.24
NELFE-213ENST00000494956 GREM2Q9H772 168 aa13.57□□□□□ -0.24
NELFE-213ENST00000494956 SCN9AQ15858 1988 aa13.57□□□□□ -0.24
NELFE-213ENST00000494956 ITGBL1O95965 494 aaPredicted RBP13.56□□□□□ -0.24
NELFE-213ENST00000494956 LMOD1P29536 600 aaPredicted RBP13.56□□□□□ -0.24
NELFE-213ENST00000494956 GMPSP49915 693 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms