RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 ANKRD13DQ6ZTN6 518 aa17.67■□□□□ 0.42
UBXN11-215ENST00000494942 C19orf44Q9H6X5 657 aa17.67■□□□□ 0.42
UBXN11-215ENST00000494942 RGPD5Q99666 1765 aa17.67■□□□□ 0.42
UBXN11-215ENST00000494942 PLEKHG2Q9H7P9 1386 aa17.67■□□□□ 0.42
UBXN11-215ENST00000494942 TAF5LO75529 589 aa17.67■□□□□ 0.42
UBXN11-215ENST00000494942 TPM3P06753 285 aa17.67■□□□□ 0.42
UBXN11-215ENST00000494942 TOB2Q14106 344 aaPredicted RBP17.67■□□□□ 0.42
UBXN11-215ENST00000494942 KLHDC4Q8TBB5 520 aa17.67■□□□□ 0.42
UBXN11-215ENST00000494942 KDM6AO15550 1401 aaPredicted RBP17.67■□□□□ 0.42
UBXN11-215ENST00000494942 PHKG2P15735 406 aa17.66■□□□□ 0.42
UBXN11-215ENST00000494942 TATP17735 454 aaPredicted RBP17.66■□□□□ 0.42
UBXN11-215ENST00000494942 CDC37L1Q7L3B6 337 aa17.66■□□□□ 0.42
UBXN11-215ENST00000494942 TTC6Q86TZ1 520 aa17.66■□□□□ 0.42
UBXN11-215ENST00000494942 EPHA10Q5JZY3 1008 aa17.66■□□□□ 0.42
UBXN11-215ENST00000494942 ZNF589Q86UQ0 364 aaPredicted RBP17.66■□□□□ 0.42
UBXN11-215ENST00000494942 NFATC2IPQ8NCF5 419 aa17.66■□□□□ 0.42
UBXN11-215ENST00000494942 ABCC6O95255 1503 aa17.66■□□□□ 0.42
UBXN11-215ENST00000494942 SNRPA1P09661 255 aaKnown RBP17.65■□□□□ 0.42
UBXN11-215ENST00000494942 TNNI3KQ59H18 835 aa17.65■□□□□ 0.42
UBXN11-215ENST00000494942 FPGT-TNNI3KV9GXZ4 949 aa17.65■□□□□ 0.42
UBXN11-215ENST00000494942 RFX5P48382 616 aaPredicted RBP17.65■□□□□ 0.42
UBXN11-215ENST00000494942 NOLC1Q14978 699 aaKnown RBP eCLIP17.65■□□□□ 0.42
UBXN11-215ENST00000494942 MAP3K11Q16584 847 aa17.65■□□□□ 0.42
UBXN11-215ENST00000494942 RABL6Q3YEC7 729 aaPredicted RBP17.65■□□□□ 0.42
UBXN11-215ENST00000494942 MTERF4Q7Z6M4 381 aaKnown RBP17.65■□□□□ 0.42
UBXN11-215ENST00000494942 IFNL2Q8IZJ0 200 aa17.65■□□□□ 0.42
UBXN11-215ENST00000494942 NUP62CLQ9H1M0 184 aa17.65■□□□□ 0.42
UBXN11-215ENST00000494942 PTPN12Q05209 780 aaKnown RBP17.64■□□□□ 0.41
UBXN11-215ENST00000494942 CERKQ8TCT0 537 aa17.64■□□□□ 0.41
UBXN11-215ENST00000494942 ZNF496Q96IT1 587 aaPredicted RBP17.64■□□□□ 0.41
UBXN11-215ENST00000494942 NLRP2Q9NX02 1062 aa17.64■□□□□ 0.41
UBXN11-215ENST00000494942 DBNLQ9UJU6 430 aaKnown RBP17.64■□□□□ 0.41
UBXN11-215ENST00000494942 U3KPZ7 1027 aaPredicted RBP17.64■□□□□ 0.41
UBXN11-215ENST00000494942 DNTTIP2Q5QJE6 756 aaKnown RBP17.64■□□□□ 0.41
UBXN11-215ENST00000494942 LRP10Q7Z4F1 713 aa17.64■□□□□ 0.41
UBXN11-215ENST00000494942 TTC5Q8N0Z6 440 aa17.64■□□□□ 0.41
UBXN11-215ENST00000494942 GOLGA6L4A6NEF3 574 aa17.63■□□□□ 0.41
UBXN11-215ENST00000494942 FERMT3Q86UX7 667 aa17.63■□□□□ 0.41
UBXN11-215ENST00000494942 PRIMPOLQ96LW4 560 aa17.63■□□□□ 0.41
UBXN11-215ENST00000494942 NEK1Q96PY6 1258 aa17.63■□□□□ 0.41
UBXN11-215ENST00000494942 C1orf167Q5SNV9 1468 aa17.63■□□□□ 0.41
UBXN11-215ENST00000494942 GOLGA6L6A8MZA4 724 aa17.63■□□□□ 0.41
UBXN11-215ENST00000494942 DTNBO60941 627 aa17.63■□□□□ 0.41
UBXN11-215ENST00000494942 ATF3P18847 181 aa17.63■□□□□ 0.41
UBXN11-215ENST00000494942 ZC3H6P61129 1189 aaKnown RBP17.63■□□□□ 0.41
UBXN11-215ENST00000494942 HMGN5P82970 282 aaKnown RBP17.63■□□□□ 0.41
UBXN11-215ENST00000494942 TFCP2Q12800 502 aa17.63■□□□□ 0.41
UBXN11-215ENST00000494942 FAM200AQ8TCP9 573 aa17.63■□□□□ 0.41
UBXN11-215ENST00000494942 SPATA32Q96LK8 384 aa17.63■□□□□ 0.41
UBXN11-215ENST00000494942 TCEANC2Q96MN5 208 aa17.63■□□□□ 0.41
UBXN11-215ENST00000494942 SPTLC3Q9NUV7 552 aa17.63■□□□□ 0.41
UBXN11-215ENST00000494942 DCCP43146 1447 aa17.62■□□□□ 0.41
UBXN11-215ENST00000494942 ALS2Q96Q42 1657 aa17.62■□□□□ 0.41
UBXN11-215ENST00000494942 COL9A3Q14050 684 aaPredicted RBP17.62■□□□□ 0.41
UBXN11-215ENST00000494942 TICAM2Q86XR7 235 aa17.62■□□□□ 0.41
UBXN11-215ENST00000494942 GTF3C6Q969F1 213 aa17.62■□□□□ 0.41
UBXN11-215ENST00000494942 DCAF5Q96JK2 942 aa17.62■□□□□ 0.41
UBXN11-215ENST00000494942 ZNF830Q96NB3 372 aaPredicted RBP17.62■□□□□ 0.41
UBXN11-215ENST00000494942 FMNL2Q96PY5 1086 aa17.62■□□□□ 0.41
UBXN11-215ENST00000494942 TTC12Q9H892 705 aaPredicted RBP17.62■□□□□ 0.41
UBXN11-215ENST00000494942 DDX19AQ9NUU7 478 aaKnown RBP17.62■□□□□ 0.41
UBXN11-215ENST00000494942 TAF6LQ9Y6J9 622 aa17.62■□□□□ 0.41
UBXN11-215ENST00000494942 PLCB2Q00722 1185 aa17.61■□□□□ 0.41
UBXN11-215ENST00000494942 MCMDC2Q4G0Z9 681 aa17.61■□□□□ 0.41
UBXN11-215ENST00000494942 HAUS7Q99871 368 aa17.61■□□□□ 0.41
UBXN11-215ENST00000494942 FAM13BQ9NYF5 915 aa17.61■□□□□ 0.41
UBXN11-215ENST00000494942 AFDNP55196 1824 aaKnown RBP17.61■□□□□ 0.41
UBXN11-215ENST00000494942 RBM10P98175 930 aaKnown RBP17.61■□□□□ 0.41
UBXN11-215ENST00000494942 USP16Q9Y5T5 823 aa17.61■□□□□ 0.41
UBXN11-215ENST00000494942 LIG1P18858 919 aa17.6■□□□□ 0.41
UBXN11-215ENST00000494942 UBE3BQ7Z3V4 1068 aa17.6■□□□□ 0.41
UBXN11-215ENST00000494942 CADPS2Q86UW7 1296 aa17.6■□□□□ 0.41
UBXN11-215ENST00000494942 MYRIPQ8NFW9 859 aa17.6■□□□□ 0.41
UBXN11-215ENST00000494942 LEO1Q8WVC0 666 aaPredicted RBP17.6■□□□□ 0.41
UBXN11-215ENST00000494942 EDC3Q96F86 508 aaKnown RBP17.6■□□□□ 0.41
UBXN11-215ENST00000494942 TNMDQ9H2S6 317 aa17.6■□□□□ 0.41
UBXN11-215ENST00000494942 TYRO3Q06418 890 aa17.6■□□□□ 0.41
UBXN11-215ENST00000494942 STK3Q13188 491 aa17.6■□□□□ 0.41
UBXN11-215ENST00000494942 HMGB1P09429 215 aaKnown RBP17.59■□□□□ 0.41
UBXN11-215ENST00000494942 FAM173BQ6P4H8 233 aa17.59■□□□□ 0.41
UBXN11-215ENST00000494942 RBM43Q6ZSC3 357 aaKnown RBP17.59■□□□□ 0.41
UBXN11-215ENST00000494942 MPNDQ8N594 471 aa17.59■□□□□ 0.41
UBXN11-215ENST00000494942 ZSCAN16Q9H4T2 348 aaPredicted RBP17.59■□□□□ 0.41
UBXN11-215ENST00000494942 MEGF6O75095 1541 aa17.59■□□□□ 0.41
UBXN11-215ENST00000494942 ZNF609O15014 1411 aa17.59■□□□□ 0.41
UBXN11-215ENST00000494942 ARFGEF2Q9Y6D5 1785 aa17.59■□□□□ 0.41
UBXN11-215ENST00000494942 A0A087WZG4 1122 aa17.59■□□□□ 0.41
UBXN11-215ENST00000494942 PLBD2Q8NHP8 589 aa17.59■□□□□ 0.41
UBXN11-215ENST00000494942 DACT1Q9NYF0 836 aa17.59■□□□□ 0.41
UBXN11-215ENST00000494942 MRVI1Q9Y6F6 885 aa17.59■□□□□ 0.41
UBXN11-215ENST00000494942 SH3TC1Q8TE82 1336 aa17.58■□□□□ 0.41
UBXN11-215ENST00000494942 AP5Z1O43299 807 aa17.58■□□□□ 0.41
UBXN11-215ENST00000494942 Q6ZUG5 572 aa17.58■□□□□ 0.41
UBXN11-215ENST00000494942 DNAJC2Q99543 621 aaKnown RBP17.58■□□□□ 0.41
UBXN11-215ENST00000494942 LLPHQ9BRT6 129 aaKnown RBP17.58■□□□□ 0.41
UBXN11-215ENST00000494942 KBTBD3Q8NAB2 608 aa17.58■□□□□ 0.4
UBXN11-215ENST00000494942 DBNDD2Q9BQY9 259 aa17.58■□□□□ 0.4
UBXN11-215ENST00000494942 CLSTN2Q9H4D0 955 aa17.58■□□□□ 0.4
UBXN11-215ENST00000494942 TFIP11Q9UBB9 837 aaKnown RBP17.58■□□□□ 0.4
UBXN11-215ENST00000494942 CFAP45Q9UL16 551 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms