RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 CCZ1P86791 482 aaPredicted RBP18.14■□□□□ 0.49
SDF4-207ENST00000494748 SLIT1O75093 1534 aa18.14■□□□□ 0.49
SDF4-207ENST00000494748 OS9Q13438 667 aaPredicted RBP18.14■□□□□ 0.49
SDF4-207ENST00000494748 TPD52L1Q16890 204 aaPredicted RBP18.14■□□□□ 0.49
SDF4-207ENST00000494748 BLOC1S2Q6QNY1 142 aa18.14■□□□□ 0.49
SDF4-207ENST00000494748 AACSQ86V21 672 aa18.14■□□□□ 0.49
SDF4-207ENST00000494748 MRFAP1L1Q96HT8 127 aa18.14■□□□□ 0.49
SDF4-207ENST00000494748 LGR6Q9HBX8 967 aa18.14■□□□□ 0.49
SDF4-207ENST00000494748 ANKRD1Q15327 319 aa18.13■□□□□ 0.49
SDF4-207ENST00000494748 KIF13AQ9H1H9 1805 aa18.13■□□□□ 0.49
SDF4-207ENST00000494748 IFIT2P09913 472 aaKnown RBP18.12■□□□□ 0.49
SDF4-207ENST00000494748 LTKP29376 864 aa18.12■□□□□ 0.49
SDF4-207ENST00000494748 KCND1Q9NSA2 647 aa18.12■□□□□ 0.49
SDF4-207ENST00000494748 TNRQ92752 1358 aa18.12■□□□□ 0.49
SDF4-207ENST00000494748 USHBP1Q8N6Y0 703 aa18.12■□□□□ 0.49
SDF4-207ENST00000494748 GTF3C6Q969F1 213 aa18.12■□□□□ 0.49
SDF4-207ENST00000494748 ZNF215Q9UL58 517 aaPredicted RBP18.12■□□□□ 0.49
SDF4-207ENST00000494748 USPL1Q5W0Q7 1092 aa18.12■□□□□ 0.49
SDF4-207ENST00000494748 DHX40Q8IX18 779 aaKnown RBP18.12■□□□□ 0.49
SDF4-207ENST00000494748 HDGFP51858 240 aaKnown RBP18.11■□□□□ 0.49
SDF4-207ENST00000494748 STK3Q13188 491 aa18.11■□□□□ 0.49
SDF4-207ENST00000494748 SETD1BQ9UPS6 1966 aaKnown RBP18.11■□□□□ 0.49
SDF4-207ENST00000494748 ABCC6O95255 1503 aa18.11■□□□□ 0.49
SDF4-207ENST00000494748 ERC1Q8IUD2 1116 aa18.11■□□□□ 0.49
SDF4-207ENST00000494748 GPATCH3Q96I76 525 aa18.11■□□□□ 0.49
SDF4-207ENST00000494748 GOLPH3LQ9H4A5 285 aa18.11■□□□□ 0.49
SDF4-207ENST00000494748 CAVIN2O95810 425 aa18.11■□□□□ 0.49
SDF4-207ENST00000494748 HIP1O00291 1037 aa18.1■□□□□ 0.49
SDF4-207ENST00000494748 SNW1Q13573 536 aaKnown RBP18.1■□□□□ 0.49
SDF4-207ENST00000494748 GOLGA6L4A6NEF3 574 aa18.1■□□□□ 0.49
SDF4-207ENST00000494748 PROSER3Q2NL68 480 aa18.1■□□□□ 0.49
SDF4-207ENST00000494748 BICD2Q8TD16 824 aa18.1■□□□□ 0.49
SDF4-207ENST00000494748 BRF1Q92994 677 aa18.1■□□□□ 0.49
SDF4-207ENST00000494748 DDX11Q96FC9 970 aa18.1■□□□□ 0.49
SDF4-207ENST00000494748 UTYO14607 1347 aa18.1■□□□□ 0.49
SDF4-207ENST00000494748 TERF2Q15554 542 aa18.1■□□□□ 0.49
SDF4-207ENST00000494748 ZNF397Q8NF99 534 aaPredicted RBP18.1■□□□□ 0.49
SDF4-207ENST00000494748 TAF5LO75529 589 aa18.09■□□□□ 0.49
SDF4-207ENST00000494748 MAP3K2Q9Y2U5 619 aa18.09■□□□□ 0.49
SDF4-207ENST00000494748 ALDH1L1O75891 902 aa18.09■□□□□ 0.49
SDF4-207ENST00000494748 KCNJ4P48050 445 aa18.09■□□□□ 0.49
SDF4-207ENST00000494748 CWF19L2Q2TBE0 894 aaKnown RBP18.09■□□□□ 0.49
SDF4-207ENST00000494748 FBXO38Q6PIJ6 1188 aa18.09■□□□□ 0.49
SDF4-207ENST00000494748 CCDC8Q9H0W5 538 aaPredicted RBP18.09■□□□□ 0.49
SDF4-207ENST00000494748 ZNF446Q9NWS9 450 aa18.09■□□□□ 0.49
SDF4-207ENST00000494748 SUCLG2Q96I99 432 aa18.09■□□□□ 0.49
SDF4-207ENST00000494748 HEG1Q9ULI3 1381 aa18.08■□□□□ 0.49
SDF4-207ENST00000494748 A0A087WWV3 80 aa18.08■□□□□ 0.49
SDF4-207ENST00000494748 NLRP6P59044 892 aa18.08■□□□□ 0.49
SDF4-207ENST00000494748 USP16Q9Y5T5 823 aa18.08■□□□□ 0.49
SDF4-207ENST00000494748 NFAT5O94916 1531 aa18.08■□□□□ 0.48
SDF4-207ENST00000494748 ZNF771Q7L3S4 317 aaPredicted RBP18.08■□□□□ 0.48
SDF4-207ENST00000494748 NBPF11Q86T75 865 aa18.08■□□□□ 0.48
SDF4-207ENST00000494748 CCAR2Q8N163 923 aaKnown RBP18.08■□□□□ 0.48
SDF4-207ENST00000494748 FTOQ9C0B1 505 aaKnown RBP eCLIP18.08■□□□□ 0.486e-7■■■□□ 15
SDF4-207ENST00000494748 HMG20BQ9P0W2 317 aa18.08■□□□□ 0.48
SDF4-207ENST00000494748 NCAPD2Q15021 1401 aa18.07■□□□□ 0.48
SDF4-207ENST00000494748 NEMFO60524 1076 aa18.07■□□□□ 0.48
SDF4-207ENST00000494748 SKILP12757 684 aa18.07■□□□□ 0.48
SDF4-207ENST00000494748 ENGASEQ8NFI3 743 aa18.07■□□□□ 0.48
SDF4-207ENST00000494748 SMARCC2Q8TAQ2 1214 aa18.07■□□□□ 0.48
SDF4-207ENST00000494748 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.07■□□□□ 0.48
SDF4-207ENST00000494748 V9GYY5 206 aaPredicted RBP18.07■□□□□ 0.48
SDF4-207ENST00000494748 RNF20Q5VTR2 975 aa18.07■□□□□ 0.48
SDF4-207ENST00000494748 ZNF592Q92610 1267 aa18.07■□□□□ 0.48
SDF4-207ENST00000494748 LTV1Q96GA3 475 aaPredicted RBP18.07■□□□□ 0.48
SDF4-207ENST00000494748 BCL11BQ9C0K0 894 aaPredicted RBP18.07■□□□□ 0.48
SDF4-207ENST00000494748 CCDC69A6NI79 296 aa18.07■□□□□ 0.48
SDF4-207ENST00000494748 SLFNL1Q499Z3 407 aa18.07■□□□□ 0.48
SDF4-207ENST00000494748 NGDNQ8NEJ9 315 aaKnown RBP18.07■□□□□ 0.48
SDF4-207ENST00000494748 BOLA2Q9H3K6 86 aa18.07■□□□□ 0.48
SDF4-207ENST00000494748 PHRF1Q9P1Y6 1649 aaKnown RBP18.07■□□□□ 0.48
SDF4-207ENST00000494748 A0A0U1RQG5 324 aaPredicted RBP18.06■□□□□ 0.48
SDF4-207ENST00000494748 NUTM2GQ5VZR2 741 aa18.06■□□□□ 0.48
SDF4-207ENST00000494748 RCOR1Q9UKL0 485 aa18.06■□□□□ 0.48
SDF4-207ENST00000494748 STX1AQ16623 288 aa18.06■□□□□ 0.48
SDF4-207ENST00000494748 BICC1Q9H694 974 aaKnown RBP18.06■□□□□ 0.48
SDF4-207ENST00000494748 PTPN14Q15678 1187 aa18.06■□□□□ 0.48
SDF4-207ENST00000494748 ELF2Q15723 593 aa18.06■□□□□ 0.48
SDF4-207ENST00000494748 KRT222Q8N1A0 295 aa18.06■□□□□ 0.48
SDF4-207ENST00000494748 EDC3Q96F86 508 aaKnown RBP18.06■□□□□ 0.48
SDF4-207ENST00000494748 PXDNQ92626 1479 aa18.06■□□□□ 0.48
SDF4-207ENST00000494748 C5P01031 1676 aa18.06■□□□□ 0.48
SDF4-207ENST00000494748 SCRN1Q12765 414 aa18.05■□□□□ 0.48
SDF4-207ENST00000494748 ERO1AQ96HE7 468 aa18.05■□□□□ 0.48
SDF4-207ENST00000494748 FSD1Q9BTV5 496 aa18.05■□□□□ 0.48
SDF4-207ENST00000494748 KSR2Q6VAB6 950 aa18.05■□□□□ 0.48
SDF4-207ENST00000494748 ZSCAN16Q9H4T2 348 aaPredicted RBP18.05■□□□□ 0.48
SDF4-207ENST00000494748 C9orf78Q9NZ63 289 aaPredicted RBP18.05■□□□□ 0.48
SDF4-207ENST00000494748 ZNF609O15014 1411 aa18.05■□□□□ 0.48
SDF4-207ENST00000494748 CTDNEP1O95476 244 aa18.05■□□□□ 0.48
SDF4-207ENST00000494748 CHGBP05060 677 aa18.05■□□□□ 0.48
SDF4-207ENST00000494748 TAF3Q5VWG9 929 aa18.05■□□□□ 0.48
SDF4-207ENST00000494748 DBF4Q9UBU7 674 aaPredicted RBP18.05■□□□□ 0.48
SDF4-207ENST00000494748 ADAMTS7Q9UKP4 1686 aa18.04■□□□□ 0.48
SDF4-207ENST00000494748 ST7Q9NRC1 585 aa18.04■□□□□ 0.48
SDF4-207ENST00000494748 ILDR1Q86SU0 546 aaPredicted RBP18.04■□□□□ 0.48
SDF4-207ENST00000494748 LRRN4CLQ8ND94 238 aa18.04■□□□□ 0.48
SDF4-207ENST00000494748 SLC26A8Q96RN1 970 aa18.04■□□□□ 0.48
SDF4-207ENST00000494748 NEDD4P46934 1319 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms