RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 NEXNQ0ZGT2 675 aa42.55■■■■■ 4.4
CBX4-203ENST00000494546 HSP90B1P14625 803 aaKnown RBP42.54■■■■■ 4.4
CBX4-203ENST00000494546 FSTL1Q12841 308 aa42.54■■■■■ 4.4
CBX4-203ENST00000494546 FLIIQ13045 1269 aa42.54■■■■■ 4.4
CBX4-203ENST00000494546 LARGE2Q8N3Y3 721 aa42.54■■■■■ 4.4
CBX4-203ENST00000494546 FZD9O00144 591 aa42.53■■■■■ 4.4
CBX4-203ENST00000494546 IGKV5-2P06315 115 aa42.52■■■■■ 4.4
CBX4-203ENST00000494546 DPP8Q6V1X1 898 aaPredicted RBP42.52■■■■■ 4.4
CBX4-203ENST00000494546 SMC1BQ8NDV3 1235 aa42.52■■■■■ 4.4
CBX4-203ENST00000494546 TAF1P21675 1872 aa42.51■■■■■ 4.4
CBX4-203ENST00000494546 MPNDQ8N594 471 aa42.51■■■■■ 4.4
CBX4-203ENST00000494546 CELF1Q92879 486 aaKnown RBP42.51■■■■■ 4.4
CBX4-203ENST00000494546 ZNF521Q96K83 1311 aa42.5■■■■■ 4.39
CBX4-203ENST00000494546 FKBP5Q13451 457 aaPredicted RBP42.5■■■■■ 4.39
CBX4-203ENST00000494546 TMC4Q7Z404 712 aa42.5■■■■■ 4.39
CBX4-203ENST00000494546 PPIP5K2O43314 1243 aa42.49■■■■■ 4.39
CBX4-203ENST00000494546 SUPT20HQ8NEM7 779 aa42.49■■■■■ 4.39
CBX4-203ENST00000494546 COL4A5P29400 1685 aa42.49■■■■■ 4.39
CBX4-203ENST00000494546 CWF19L2Q2TBE0 894 aaKnown RBP42.48■■■■■ 4.39
CBX4-203ENST00000494546 AOC3Q16853 763 aa42.47■■■■■ 4.39
CBX4-203ENST00000494546 L3MBTL3Q96JM7 780 aaPredicted RBP42.47■■■■■ 4.39
CBX4-203ENST00000494546 IQCA1LA6NCM1 817 aa42.46■■■■■ 4.39
CBX4-203ENST00000494546 PDE8AO60658 829 aa42.46■■■■■ 4.39
CBX4-203ENST00000494546 EIF6P56537 245 aaKnown RBP42.46■■■■■ 4.39
CBX4-203ENST00000494546 NIM1KQ8IY84 436 aa42.46■■■■■ 4.39
CBX4-203ENST00000494546 RTFDC1Q9BY42 306 aaPredicted RBP42.46■■■■■ 4.39
CBX4-203ENST00000494546 APLP1P51693 650 aa42.45■■■■■ 4.39
CBX4-203ENST00000494546 NEURL1BA8MQ27 555 aa42.44■■■■■ 4.38
CBX4-203ENST00000494546 CCER2I3L3R5 266 aa42.44■■■■■ 4.38
CBX4-203ENST00000494546 CCDC152Q4G0S7 254 aa42.43■■■■■ 4.38
CBX4-203ENST00000494546 DNAAF4Q8WXU2 420 aa42.43■■■■■ 4.38
CBX4-203ENST00000494546 CCDC85AQ96PX6 553 aaPredicted RBP42.43■■■■■ 4.38
CBX4-203ENST00000494546 VPS33BQ9H267 617 aa42.43■■■■■ 4.38
CBX4-203ENST00000494546 CDHR2Q9BYE9 1310 aa42.43■■■■■ 4.38
CBX4-203ENST00000494546 GPC2Q8N158 579 aa42.42■■■■■ 4.38
CBX4-203ENST00000494546 SEC31BQ9NQW1 1179 aa42.42■■■■■ 4.38
CBX4-203ENST00000494546 GJA3Q9Y6H8 435 aa42.42■■■■■ 4.38
CBX4-203ENST00000494546 RPS8P62241 208 aaKnown RBP42.41■■■■■ 4.38
CBX4-203ENST00000494546 COL4A1P02462 1669 aa42.41■■■■■ 4.38
CBX4-203ENST00000494546 NSFL1CQ9UNZ2 370 aaKnown RBP42.39■■■■■ 4.38
CBX4-203ENST00000494546 CACNA1FO60840 1977 aa42.39■■■■■ 4.38
CBX4-203ENST00000494546 TAF1DQ9H5J8 278 aaPredicted RBP42.38■■■■■ 4.37
CBX4-203ENST00000494546 HACL1Q9UJ83 578 aa42.38■■■■■ 4.37
CBX4-203ENST00000494546 LRRC37AA6NMS7 1700 aa42.37■■■■■ 4.37
CBX4-203ENST00000494546 POTEIP0CG38 1075 aa42.36■■■■■ 4.37
CBX4-203ENST00000494546 POTEJP0CG39 1038 aa42.36■■■■■ 4.37
CBX4-203ENST00000494546 UBE3BQ7Z3V4 1068 aa42.36■■■■■ 4.37
CBX4-203ENST00000494546 SCN4AP35499 1836 aa42.35■■■■■ 4.37
CBX4-203ENST00000494546 CTSWP56202 376 aa42.35■■■■■ 4.37
CBX4-203ENST00000494546 KIAA2012Q0VF49 1180 aa42.35■■■■■ 4.37
CBX4-203ENST00000494546 GCKRQ14397 625 aa42.35■■■■■ 4.37
CBX4-203ENST00000494546 LINS1Q8NG48 757 aa42.35■■■■■ 4.37
CBX4-203ENST00000494546 E9PSI1 815 aa42.34■■■■■ 4.37
CBX4-203ENST00000494546 GPSM2P81274 684 aa42.34■■■■■ 4.37
CBX4-203ENST00000494546 F6X3S4 739 aa42.33■■■■■ 4.37
CBX4-203ENST00000494546 H7C1W4 665 aa42.33■■■■■ 4.37
CBX4-203ENST00000494546 ZNRF3Q9ULT6 936 aa42.33■■■■■ 4.37
CBX4-203ENST00000494546 DUOX1Q9NRD9 1551 aa42.32■■■■■ 4.37
CBX4-203ENST00000494546 EPHX2P34913 555 aa42.32■■■■■ 4.37
CBX4-203ENST00000494546 EAPPQ56P03 285 aaPredicted RBP42.32■■■■■ 4.37
CBX4-203ENST00000494546 CHADLQ6NUI6 762 aa42.32■■■■■ 4.37
CBX4-203ENST00000494546 CEP350Q5VT06 3117 aa42.32■■■■■ 4.36
CBX4-203ENST00000494546 C6orf229H3BNL8 230 aa42.31■■■■■ 4.36
CBX4-203ENST00000494546 HTRA3P83110 453 aa42.3■■■■■ 4.36
CBX4-203ENST00000494546 TTLL11Q8NHH1 800 aa42.3■■■■■ 4.36
CBX4-203ENST00000494546 ANKRD18AQ8IVF6 992 aa42.29■■■■■ 4.36
CBX4-203ENST00000494546 POLLQ9UGP5 575 aa42.29■■■■■ 4.36
CBX4-203ENST00000494546 WASHC4Q2M389 1173 aa42.28■■■■■ 4.36
CBX4-203ENST00000494546 LDHDQ86WU2 507 aa42.28■■■■■ 4.36
CBX4-203ENST00000494546 LMOD1P29536 600 aaPredicted RBP42.27■■■■■ 4.36
CBX4-203ENST00000494546 CXCL9Q07325 125 aa42.27■■■■■ 4.36
CBX4-203ENST00000494546 SLFN5Q08AF3 891 aa42.27■■■■■ 4.36
CBX4-203ENST00000494546 GREM2Q9H772 168 aa42.27■■■■■ 4.36
CBX4-203ENST00000494546 CDC5LQ99459 802 aaKnown RBP42.26■■■■■ 4.36
CBX4-203ENST00000494546 RIMBP2O15034 1052 aa42.25■■■■■ 4.35
CBX4-203ENST00000494546 ANKIB1Q9P2G1 1089 aa42.25■■■■■ 4.35
CBX4-203ENST00000494546 SCNN1DP51172 638 aa42.24■■■■■ 4.35
CBX4-203ENST00000494546 BEND3Q5T5X7 828 aa42.24■■■■■ 4.35
CBX4-203ENST00000494546 PNMA8AQ86V59 439 aaPredicted RBP42.24■■■■■ 4.35
CBX4-203ENST00000494546 TBC1D16Q8TBP0 767 aa42.24■■■■■ 4.35
CBX4-203ENST00000494546 CDCA7LQ96GN5 454 aa42.24■■■■■ 4.35
CBX4-203ENST00000494546 CLEC11AQ9Y240 323 aa42.24■■■■■ 4.35
CBX4-203ENST00000494546 CASP7P55210 303 aa42.23■■■■■ 4.35
CBX4-203ENST00000494546 EYA3Q99504 573 aa42.23■■■■■ 4.35
CBX4-203ENST00000494546 RAD17O75943 681 aa42.22■■■■■ 4.35
CBX4-203ENST00000494546 CIAPIN1Q6FI81 312 aa42.22■■■■■ 4.35
CBX4-203ENST00000494546 GPR101Q96P66 508 aaPredicted RBP42.22■■■■■ 4.35
CBX4-203ENST00000494546 PLA2G12BQ9BX93 195 aa42.22■■■■■ 4.35
CBX4-203ENST00000494546 EPS15P42566 896 aa42.21■■■■■ 4.35
CBX4-203ENST00000494546 PODXL2Q9NZ53 605 aa42.21■■■■■ 4.35
CBX4-203ENST00000494546 MYH3P11055 1940 aa42.2■■■■■ 4.35
CBX4-203ENST00000494546 UFL1O94874 794 aa42.2■■■■■ 4.35
CBX4-203ENST00000494546 DBNDD1Q9H9R9 158 aa42.2■■■■■ 4.35
CBX4-203ENST00000494546 LTBP1Q14766 1721 aa42.2■■■■■ 4.35
CBX4-203ENST00000494546 RTL9Q8NET4 1388 aa42.19■■■■■ 4.34
CBX4-203ENST00000494546 YDJCA8MPS7 323 aa42.19■■■■■ 4.34
CBX4-203ENST00000494546 SLC4A10Q6U841 1118 aa42.19■■■■■ 4.34
CBX4-203ENST00000494546 DNAJC5GQ8N7S2 189 aa42.19■■■■■ 4.34
CBX4-203ENST00000494546 GGA1Q9UJY5 639 aa42.19■■■■■ 4.34
CBX4-203ENST00000494546 TNIP1Q15025 636 aa42.18■■■■■ 4.34
Retrieved 100 of 20,778 RNA–protein pairs in 180 ms