RNA–Protein interactions for RNA: ENST00000494538.6

CBWD6-208, Transcript of COBW domain containing 6, humanhuman

TSL 1 (best)

Gene CBWD6, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6-208ENST00000494538 SLC10A5Q5PT55 438 aa16.1■□□□□ 0.17
CBWD6-208ENST00000494538 KDM2BQ8NHM5 1336 aa16.09■□□□□ 0.17
CBWD6-208ENST00000494538 LAMB2P55268 1798 aa16.09■□□□□ 0.17
CBWD6-208ENST00000494538 MYH3P11055 1940 aa16.09■□□□□ 0.17
CBWD6-208ENST00000494538 APBB1O00213 710 aa16.09■□□□□ 0.17
CBWD6-208ENST00000494538 SURF6O75683 361 aaKnown RBP16.09■□□□□ 0.17
CBWD6-208ENST00000494538 CSF1RP07333 972 aa16.09■□□□□ 0.17
CBWD6-208ENST00000494538 CCDC152Q4G0S7 254 aa16.09■□□□□ 0.17
CBWD6-208ENST00000494538 KLHDC4Q8TBB5 520 aa16.09■□□□□ 0.17
CBWD6-208ENST00000494538 GREM2Q9H772 168 aa16.09■□□□□ 0.17
CBWD6-208ENST00000494538 PA2G4Q9UQ80 394 aaKnown RBP16.09■□□□□ 0.17
CBWD6-208ENST00000494538 EXOC6BQ9Y2D4 811 aa16.09■□□□□ 0.17
CBWD6-208ENST00000494538 IFIT5Q13325 482 aaKnown RBP16.08■□□□□ 0.17
CBWD6-208ENST00000494538 C3orf67Q6ZVT6 689 aa16.08■□□□□ 0.17
CBWD6-208ENST00000494538 GCC1Q96CN9 775 aa16.08■□□□□ 0.17
CBWD6-208ENST00000494538 BCL11AQ9H165 835 aa16.08■□□□□ 0.17
CBWD6-208ENST00000494538 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.17
CBWD6-208ENST00000494538 ITGA6P23229 1130 aa16.08■□□□□ 0.16
CBWD6-208ENST00000494538 OS9Q13438 667 aaPredicted RBP16.08■□□□□ 0.16
CBWD6-208ENST00000494538 TAF7LQ5H9L4 462 aa16.08■□□□□ 0.16
CBWD6-208ENST00000494538 SIL1Q9H173 461 aa16.08■□□□□ 0.16
CBWD6-208ENST00000494538 DCTPP1Q9H773 170 aa16.08■□□□□ 0.16
CBWD6-208ENST00000494538 ANKRD18BA2A2Z9 1011 aa16.07■□□□□ 0.16
CBWD6-208ENST00000494538 MTFR1LQ9H019 292 aa16.07■□□□□ 0.16
CBWD6-208ENST00000494538 CASZ1Q86V15 1759 aa16.06■□□□□ 0.16
CBWD6-208ENST00000494538 RFX5P48382 616 aaPredicted RBP16.06■□□□□ 0.16
CBWD6-208ENST00000494538 ZNF594Q96JF6 807 aaPredicted RBP16.06■□□□□ 0.16
CBWD6-208ENST00000494538 PTPN12Q05209 780 aaKnown RBP16.05■□□□□ 0.16
CBWD6-208ENST00000494538 G3BP1Q13283 466 aaKnown RBP eCLIP16.05■□□□□ 0.16
CBWD6-208ENST00000494538 SF3B3Q15393 1217 aaKnown RBP16.05■□□□□ 0.16
CBWD6-208ENST00000494538 SMC5Q8IY18 1101 aa16.05■□□□□ 0.16
CBWD6-208ENST00000494538 ZBTB47Q9UFB7 747 aaPredicted RBP16.05■□□□□ 0.16
CBWD6-208ENST00000494538 TNRC6CQ9HCJ0 1690 aaKnown RBP16.05■□□□□ 0.16
CBWD6-208ENST00000494538 NRXN2Q9P2S2 1712 aa16.05■□□□□ 0.16
CBWD6-208ENST00000494538 HSP90AB4PQ58FF6 505 aa16.05■□□□□ 0.16
CBWD6-208ENST00000494538 ANKRD45Q5TZF3 282 aa16.05■□□□□ 0.16
CBWD6-208ENST00000494538 SEC31BQ9NQW1 1179 aa16.05■□□□□ 0.16
CBWD6-208ENST00000494538 POLD1P28340 1107 aa16.04■□□□□ 0.16
CBWD6-208ENST00000494538 BRIP1Q9BX63 1249 aa16.04■□□□□ 0.16
CBWD6-208ENST00000494538 COPRSQ9NQ92 184 aa16.04■□□□□ 0.16
CBWD6-208ENST00000494538 RIC1Q4ADV7 1423 aa16.03■□□□□ 0.16
CBWD6-208ENST00000494538 RPGRQ92834 1020 aaKnown RBP16.03■□□□□ 0.16
CBWD6-208ENST00000494538 DDX46Q7L014 1031 aaKnown RBP16.03■□□□□ 0.16
CBWD6-208ENST00000494538 NOP58Q9Y2X3 529 aaKnown RBP16.03■□□□□ 0.16
CBWD6-208ENST00000494538 RTL9Q8NET4 1388 aa16.02■□□□□ 0.16
CBWD6-208ENST00000494538 RAB11FIP3O75154 756 aa16.02■□□□□ 0.16
CBWD6-208ENST00000494538 PDE6BP35913 854 aa16.02■□□□□ 0.16
CBWD6-208ENST00000494538 LDHAL6AQ6ZMR3 332 aa16.02■□□□□ 0.16
CBWD6-208ENST00000494538 CDC5LQ99459 802 aaKnown RBP16.02■□□□□ 0.16
CBWD6-208ENST00000494538 MPHOSPH8Q99549 860 aa16.02■□□□□ 0.16
CBWD6-208ENST00000494538 LRRCC1Q9C099 1032 aa16.02■□□□□ 0.16
CBWD6-208ENST00000494538 CNNM1Q9NRU3 951 aa16.02■□□□□ 0.16
CBWD6-208ENST00000494538 PDZRN3Q9UPQ7 1066 aa16.02■□□□□ 0.16
CBWD6-208ENST00000494538 SMARCA5O60264 1052 aaPredicted RBP16.01■□□□□ 0.15
CBWD6-208ENST00000494538 IGHMBP2P38935 993 aaKnown RBP16.01■□□□□ 0.15
CBWD6-208ENST00000494538 NUCB1Q02818 461 aa16.01■□□□□ 0.15
CBWD6-208ENST00000494538 LRRC24Q50LG9 513 aa16.01■□□□□ 0.15
CBWD6-208ENST00000494538 PUS3Q9BZE2 481 aaKnown RBP16.01■□□□□ 0.15
CBWD6-208ENST00000494538 LNPKQ9C0E8 428 aa16.01■□□□□ 0.15
CBWD6-208ENST00000494538 EYA2O00167 538 aa16.01■□□□□ 0.15
CBWD6-208ENST00000494538 CRY2Q49AN0 593 aa16.01■□□□□ 0.15
CBWD6-208ENST00000494538 CHD1LQ86WJ1 897 aa16.01■□□□□ 0.15
CBWD6-208ENST00000494538 ERC1Q8IUD2 1116 aa16.01■□□□□ 0.15
CBWD6-208ENST00000494538 ANKRD18AQ8IVF6 992 aa16.01■□□□□ 0.15
CBWD6-208ENST00000494538 RHPN1Q8TCX5 695 aa16.01■□□□□ 0.15
CBWD6-208ENST00000494538 ANKRD31Q8N7Z5 1873 aa16■□□□□ 0.15
CBWD6-208ENST00000494538 SKAP1Q86WV1 359 aa16■□□□□ 0.15
CBWD6-208ENST00000494538 KIF1BPQ96EK5 621 aa16■□□□□ 0.15
CBWD6-208ENST00000494538 RBM17Q96I25 401 aaKnown RBP16■□□□□ 0.15
CBWD6-208ENST00000494538 IL1RAPL2Q9NP60 686 aa16■□□□□ 0.15
CBWD6-208ENST00000494538 IL15P40933 162 aaPredicted RBP15.99■□□□□ 0.15
CBWD6-208ENST00000494538 CELF1Q92879 486 aaKnown RBP15.99■□□□□ 0.15
CBWD6-208ENST00000494538 TAF1P21675 1872 aa15.99■□□□□ 0.15
CBWD6-208ENST00000494538 KLRG2A4D1S0 409 aaPredicted RBP15.98■□□□□ 0.15
CBWD6-208ENST00000494538 CIAO1O76071 339 aa15.98■□□□□ 0.15
CBWD6-208ENST00000494538 SASH1O94885 1247 aa15.98■□□□□ 0.15
CBWD6-208ENST00000494538 ATG9AQ7Z3C6 839 aa15.98■□□□□ 0.15
CBWD6-208ENST00000494538 C2CD5Q86YS7 1000 aa15.98■□□□□ 0.15
CBWD6-208ENST00000494538 SPEF2Q9C093 1822 aa15.98■□□□□ 0.15
CBWD6-208ENST00000494538 H0YIN7 160 aa15.98■□□□□ 0.15
CBWD6-208ENST00000494538 RPS8P62241 208 aaKnown RBP15.98■□□□□ 0.15
CBWD6-208ENST00000494538 TFCP2Q12800 502 aa15.98■□□□□ 0.15
CBWD6-208ENST00000494538 GRAPQ13588 217 aa15.98■□□□□ 0.15
CBWD6-208ENST00000494538 GRAPLQ8TC17 118 aaPredicted RBP15.98■□□□□ 0.15
CBWD6-208ENST00000494538 PPP1R1BQ9UD71 204 aaPredicted RBP15.98■□□□□ 0.15
CBWD6-208ENST00000494538 FBXO3Q9UK99 471 aa15.98■□□□□ 0.15
CBWD6-208ENST00000494538 SRGNP10124 158 aa15.97■□□□□ 0.15
CBWD6-208ENST00000494538 RGS3P49796 1198 aa15.97■□□□□ 0.15
CBWD6-208ENST00000494538 METTL24Q5JXM2 366 aa15.97■□□□□ 0.15
CBWD6-208ENST00000494538 KLHL34Q8N239 644 aa15.97■□□□□ 0.15
CBWD6-208ENST00000494538 ZNF622Q969S3 477 aaKnown RBP eCLIP15.97■□□□□ 0.15
CBWD6-208ENST00000494538 COL4A1P02462 1669 aa15.97■□□□□ 0.15
CBWD6-208ENST00000494538 C10orf71Q711Q0 1435 aa15.96■□□□□ 0.15
CBWD6-208ENST00000494538 SOCS7O14512 581 aa15.96■□□□□ 0.15
CBWD6-208ENST00000494538 NPR1P16066 1061 aa15.96■□□□□ 0.15
CBWD6-208ENST00000494538 CLASRPQ8N2M8 674 aaKnown RBP15.96■□□□□ 0.15
CBWD6-208ENST00000494538 MASTLQ96GX5 879 aa15.96■□□□□ 0.15
CBWD6-208ENST00000494538 SPON1Q9HCB6 807 aa15.96■□□□□ 0.15
CBWD6-208ENST00000494538 CEP126Q9P2H0 1117 aa15.96■□□□□ 0.15
CBWD6-208ENST00000494538 RIPOR2Q9Y4F9 1068 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms