RNA–Protein interactions for RNA: ENST00000494532.1

UBE3C-207, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-207ENST00000494532 CCDC24Q8N4L8 307 aa17.51■□□□□ 0.39
UBE3C-207ENST00000494532 TTLL11Q8NHH1 800 aa17.51■□□□□ 0.39
UBE3C-207ENST00000494532 CCDC85AQ96PX6 553 aaPredicted RBP17.51■□□□□ 0.39
UBE3C-207ENST00000494532 DCTPP1Q9H773 170 aa17.51■□□□□ 0.39
UBE3C-207ENST00000494532 NRXN2Q9P2S2 1712 aa17.51■□□□□ 0.39
UBE3C-207ENST00000494532 CCDC152Q4G0S7 254 aa17.5■□□□□ 0.39
UBE3C-207ENST00000494532 TNRC6CQ9HCJ0 1690 aaKnown RBP17.49■□□□□ 0.39
UBE3C-207ENST00000494532 RIC1Q4ADV7 1423 aa17.49■□□□□ 0.39
UBE3C-207ENST00000494532 SURF6O75683 361 aaKnown RBP17.49■□□□□ 0.39
UBE3C-207ENST00000494532 CCDC57Q2TAC2 916 aa17.49■□□□□ 0.39
UBE3C-207ENST00000494532 GREM2Q9H772 168 aa17.49■□□□□ 0.39
UBE3C-207ENST00000494532 RFX5P48382 616 aaPredicted RBP17.48■□□□□ 0.39
UBE3C-207ENST00000494532 IFIT5Q13325 482 aaKnown RBP17.48■□□□□ 0.39
UBE3C-207ENST00000494532 TAF7LQ5H9L4 462 aa17.48■□□□□ 0.39
UBE3C-207ENST00000494532 NLRP3Q96P20 1036 aa17.48■□□□□ 0.39
UBE3C-207ENST00000494532 PA2G4Q9UQ80 394 aaKnown RBP17.48■□□□□ 0.39
UBE3C-207ENST00000494532 EXOC6BQ9Y2D4 811 aa17.48■□□□□ 0.39
UBE3C-207ENST00000494532 ANKRD18BA2A2Z9 1011 aa17.47■□□□□ 0.39
UBE3C-207ENST00000494532 APBB1O00213 710 aa17.47■□□□□ 0.39
UBE3C-207ENST00000494532 ITGA6P23229 1130 aa17.47■□□□□ 0.39
UBE3C-207ENST00000494532 OS9Q13438 667 aaPredicted RBP17.47■□□□□ 0.39
UBE3C-207ENST00000494532 SF3B3Q15393 1217 aaKnown RBP17.47■□□□□ 0.39
UBE3C-207ENST00000494532 HSP90AB4PQ58FF6 505 aa17.47■□□□□ 0.39
UBE3C-207ENST00000494532 C3orf67Q6ZVT6 689 aa17.47■□□□□ 0.39
UBE3C-207ENST00000494532 KLHDC4Q8TBB5 520 aa17.47■□□□□ 0.39
UBE3C-207ENST00000494532 COPRSQ9NQ92 184 aa17.47■□□□□ 0.39
UBE3C-207ENST00000494532 RTL9Q8NET4 1388 aa17.47■□□□□ 0.39
UBE3C-207ENST00000494532 PSDA5PKW4 1024 aaPredicted RBP17.46■□□□□ 0.39
UBE3C-207ENST00000494532 PTPN12Q05209 780 aaKnown RBP17.46■□□□□ 0.39
UBE3C-207ENST00000494532 G3BP1Q13283 466 aaKnown RBP eCLIP17.46■□□□□ 0.39
UBE3C-207ENST00000494532 SIL1Q9H173 461 aa17.46■□□□□ 0.39
UBE3C-207ENST00000494532 ZBTB47Q9UFB7 747 aaPredicted RBP17.46■□□□□ 0.39
UBE3C-207ENST00000494532 PDZRN3Q9UPQ7 1066 aa17.46■□□□□ 0.39
UBE3C-207ENST00000494532 NOP58Q9Y2X3 529 aaKnown RBP17.46■□□□□ 0.39
UBE3C-207ENST00000494532 RAB11FIP3O75154 756 aa17.45■□□□□ 0.38
UBE3C-207ENST00000494532 ZBTB7AO95365 584 aa17.45■□□□□ 0.38
UBE3C-207ENST00000494532 ANKRD45Q5TZF3 282 aa17.45■□□□□ 0.38
UBE3C-207ENST00000494532 ANKRD31Q8N7Z5 1873 aa17.45■□□□□ 0.38
UBE3C-207ENST00000494532 NUCB1Q02818 461 aa17.44■□□□□ 0.38
UBE3C-207ENST00000494532 ERC1Q8IUD2 1116 aa17.44■□□□□ 0.38
UBE3C-207ENST00000494532 ZNF594Q96JF6 807 aaPredicted RBP17.44■□□□□ 0.38
UBE3C-207ENST00000494532 MTFR1LQ9H019 292 aa17.44■□□□□ 0.38
UBE3C-207ENST00000494532 SPEF2Q9C093 1822 aa17.44■□□□□ 0.38
UBE3C-207ENST00000494532 CDC5LQ99459 802 aaKnown RBP17.43■□□□□ 0.38
UBE3C-207ENST00000494532 BRIP1Q9BX63 1249 aa17.43■□□□□ 0.38
UBE3C-207ENST00000494532 LRRCC1Q9C099 1032 aa17.43■□□□□ 0.38
UBE3C-207ENST00000494532 SEC31BQ9NQW1 1179 aa17.43■□□□□ 0.38
UBE3C-207ENST00000494532 LRP5O75197 1615 aa17.43■□□□□ 0.38
UBE3C-207ENST00000494532 SMARCA5O60264 1052 aaPredicted RBP17.42■□□□□ 0.38
UBE3C-207ENST00000494532 DDX46Q7L014 1031 aaKnown RBP17.42■□□□□ 0.38
UBE3C-207ENST00000494532 CHD1LQ86WJ1 897 aa17.42■□□□□ 0.38
UBE3C-207ENST00000494532 RHPN1Q8TCX5 695 aa17.42■□□□□ 0.38
UBE3C-207ENST00000494532 RPGRQ92834 1020 aaKnown RBP17.42■□□□□ 0.38
UBE3C-207ENST00000494532 KIF1BPQ96EK5 621 aa17.42■□□□□ 0.38
UBE3C-207ENST00000494532 LNPKQ9C0E8 428 aa17.42■□□□□ 0.38
UBE3C-207ENST00000494532 ATF5Q9Y2D1 282 aaPredicted RBP17.42■□□□□ 0.38
UBE3C-207ENST00000494532 EYA2O00167 538 aa17.41■□□□□ 0.38
UBE3C-207ENST00000494532 CIAO1O76071 339 aa17.41■□□□□ 0.38
UBE3C-207ENST00000494532 POLD1P28340 1107 aa17.41■□□□□ 0.38
UBE3C-207ENST00000494532 PDE6BP35913 854 aa17.41■□□□□ 0.38
UBE3C-207ENST00000494532 IGHMBP2P38935 993 aaKnown RBP17.41■□□□□ 0.38
UBE3C-207ENST00000494532 BCL11AQ9H165 835 aa17.41■□□□□ 0.38
UBE3C-207ENST00000494532 FBXO3Q9UK99 471 aa17.41■□□□□ 0.38
UBE3C-207ENST00000494532 TAF1P21675 1872 aa17.4■□□□□ 0.38
UBE3C-207ENST00000494532 IL15P40933 162 aaPredicted RBP17.4■□□□□ 0.38
UBE3C-207ENST00000494532 CRY2Q49AN0 593 aa17.4■□□□□ 0.38
UBE3C-207ENST00000494532 LRRC24Q50LG9 513 aa17.4■□□□□ 0.38
UBE3C-207ENST00000494532 LDHAL6AQ6ZMR3 332 aa17.4■□□□□ 0.38
UBE3C-207ENST00000494532 ANKRD18AQ8IVF6 992 aa17.4■□□□□ 0.38
UBE3C-207ENST00000494532 MPHOSPH8Q99549 860 aa17.4■□□□□ 0.38
UBE3C-207ENST00000494532 PUS3Q9BZE2 481 aaKnown RBP17.4■□□□□ 0.38
UBE3C-207ENST00000494532 CNNM1Q9NRU3 951 aa17.4■□□□□ 0.38
UBE3C-207ENST00000494532 KLRG2A4D1S0 409 aaPredicted RBP17.39■□□□□ 0.37
UBE3C-207ENST00000494532 SASH1O94885 1247 aa17.39■□□□□ 0.37
UBE3C-207ENST00000494532 ATG9AQ7Z3C6 839 aa17.39■□□□□ 0.37
UBE3C-207ENST00000494532 SKAP1Q86WV1 359 aa17.39■□□□□ 0.37
UBE3C-207ENST00000494532 RBM17Q96I25 401 aaKnown RBP17.39■□□□□ 0.37
UBE3C-207ENST00000494532 COL4A1P02462 1669 aa17.39■□□□□ 0.37
UBE3C-207ENST00000494532 C10orf71Q711Q0 1435 aa17.38■□□□□ 0.37
UBE3C-207ENST00000494532 COL11A2P13942 1736 aaPredicted RBP17.38■□□□□ 0.37
UBE3C-207ENST00000494532 IL1RAPL2Q9NP60 686 aa17.38■□□□□ 0.37
UBE3C-207ENST00000494532 RGS3P49796 1198 aa17.37■□□□□ 0.37
UBE3C-207ENST00000494532 RPS8P62241 208 aaKnown RBP17.37■□□□□ 0.37
UBE3C-207ENST00000494532 TFCP2Q12800 502 aa17.37■□□□□ 0.37
UBE3C-207ENST00000494532 GRAPQ13588 217 aa17.37■□□□□ 0.37
UBE3C-207ENST00000494532 GRAPLQ8TC17 118 aaPredicted RBP17.37■□□□□ 0.37
UBE3C-207ENST00000494532 CELF1Q92879 486 aaKnown RBP17.37■□□□□ 0.37
UBE3C-207ENST00000494532 RIPOR2Q9Y4F9 1068 aa17.37■□□□□ 0.37
UBE3C-207ENST00000494532 NPR1P16066 1061 aa17.36■□□□□ 0.37
UBE3C-207ENST00000494532 PDE4AP27815 886 aa17.36■□□□□ 0.37
UBE3C-207ENST00000494532 HOXA10P31260 410 aaPredicted RBP17.36■□□□□ 0.37
UBE3C-207ENST00000494532 METTL24Q5JXM2 366 aa17.36■□□□□ 0.37
UBE3C-207ENST00000494532 C2CD5Q86YS7 1000 aa17.36■□□□□ 0.37
UBE3C-207ENST00000494532 CLASRPQ8N2M8 674 aaKnown RBP17.36■□□□□ 0.37
UBE3C-207ENST00000494532 CEP126Q9P2H0 1117 aa17.36■□□□□ 0.37
UBE3C-207ENST00000494532 SRGNP10124 158 aa17.35■□□□□ 0.37
UBE3C-207ENST00000494532 CRAMP1Q96RY5 1269 aa17.35■□□□□ 0.37
UBE3C-207ENST00000494532 BSDC1Q9NW68 430 aaPredicted RBP17.35■□□□□ 0.37
UBE3C-207ENST00000494532 MROH5Q6ZUA9 1318 aa17.35■□□□□ 0.37
UBE3C-207ENST00000494532 KIF13BQ9NQT8 1826 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms