RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 CCDC93Q567U6 631 aa29.75■■■□□ 2.35
CLIC3-203ENST00000494426 GRAPLQ8TC17 118 aaPredicted RBP29.75■■■□□ 2.35
CLIC3-203ENST00000494426 SRCIN1Q9C0H9 1055 aa29.75■■■□□ 2.35
CLIC3-203ENST00000494426 MYH3P11055 1940 aa29.75■■■□□ 2.35
CLIC3-203ENST00000494426 PPEF1O14829 653 aaPredicted RBP29.74■■■□□ 2.35
CLIC3-203ENST00000494426 C9orf131Q5VYM1 1079 aa29.74■■■□□ 2.35
CLIC3-203ENST00000494426 BCAR3O75815 825 aa29.73■■■□□ 2.35
CLIC3-203ENST00000494426 BBOX1O75936 387 aa29.73■■■□□ 2.35
CLIC3-203ENST00000494426 LTBP3Q9NS15 1303 aa29.72■■■□□ 2.35
CLIC3-203ENST00000494426 CELF1Q92879 486 aaKnown RBP29.72■■■□□ 2.35
CLIC3-203ENST00000494426 PLA2G12BQ9BX93 195 aa29.72■■■□□ 2.35
CLIC3-203ENST00000494426 CTSWP56202 376 aa29.71■■■□□ 2.35
CLIC3-203ENST00000494426 TTLL11Q8NHH1 800 aa29.71■■■□□ 2.35
CLIC3-203ENST00000494426 CCDC85AQ96PX6 553 aaPredicted RBP29.71■■■□□ 2.35
CLIC3-203ENST00000494426 SEC31BQ9NQW1 1179 aa29.71■■■□□ 2.35
CLIC3-203ENST00000494426 ATP6V0A2Q9Y487 856 aa29.71■■■□□ 2.35
CLIC3-203ENST00000494426 RTKN2Q8IZC4 609 aa29.7■■■□□ 2.35
CLIC3-203ENST00000494426 TAOK3Q9H2K8 898 aa29.7■■■□□ 2.35
CLIC3-203ENST00000494426 RNF181Q9P0P0 153 aa29.7■■■□□ 2.35
CLIC3-203ENST00000494426 GRM8O00222 908 aa29.69■■■□□ 2.34
CLIC3-203ENST00000494426 LMNB1P20700 586 aa29.69■■■□□ 2.34
CLIC3-203ENST00000494426 CCDC152Q4G0S7 254 aa29.69■■■□□ 2.34
CLIC3-203ENST00000494426 CC2D2BQ6DHV5 1058 aa29.69■■■□□ 2.34
CLIC3-203ENST00000494426 FKBP4Q02790 459 aaKnown RBP eCLIP29.68■■■□□ 2.34
CLIC3-203ENST00000494426 SP8Q8IXZ3 490 aa29.68■■■□□ 2.34
CLIC3-203ENST00000494426 ARHGAP45Q92619 1136 aa29.68■■■□□ 2.34
CLIC3-203ENST00000494426 DICER1Q9UPY3 1922 aaKnown RBP29.67■■■□□ 2.34
CLIC3-203ENST00000494426 ZNF784Q8NCA9 323 aaPredicted RBP29.67■■■□□ 2.34
CLIC3-203ENST00000494426 API5Q9BZZ5 524 aaKnown RBP29.67■■■□□ 2.34
CLIC3-203ENST00000494426 KIF16BQ96L93 1317 aa29.67■■■□□ 2.34
CLIC3-203ENST00000494426 LRRC37AA6NMS7 1700 aa29.66■■■□□ 2.34
CLIC3-203ENST00000494426 CSF1RP07333 972 aa29.66■■■□□ 2.34
CLIC3-203ENST00000494426 FOXO4P98177 505 aa29.66■■■□□ 2.34
CLIC3-203ENST00000494426 GREM2Q9H772 168 aa29.66■■■□□ 2.34
CLIC3-203ENST00000494426 C9orf78Q9NZ63 289 aaPredicted RBP29.66■■■□□ 2.34
CLIC3-203ENST00000494426 UTYO14607 1347 aa29.66■■■□□ 2.34
CLIC3-203ENST00000494426 NBPF7P0C2Y1 421 aaPredicted RBP29.65■■■□□ 2.34
CLIC3-203ENST00000494426 RPS8P62241 208 aaKnown RBP29.65■■■□□ 2.34
CLIC3-203ENST00000494426 EPHA10Q5JZY3 1008 aa29.64■■■□□ 2.34
CLIC3-203ENST00000494426 TMC4Q7Z404 712 aa29.64■■■□□ 2.34
CLIC3-203ENST00000494426 PSMD1Q99460 953 aa29.64■■■□□ 2.34
CLIC3-203ENST00000494426 RTL9Q8NET4 1388 aa29.64■■■□□ 2.33
CLIC3-203ENST00000494426 GRIPAP1Q4V328 841 aa29.63■■■□□ 2.33
CLIC3-203ENST00000494426 ZNF277Q9NRM2 450 aaPredicted RBP29.63■■■□□ 2.33
CLIC3-203ENST00000494426 TNNQ9UQP3 1299 aa29.63■■■□□ 2.33
CLIC3-203ENST00000494426 TIAM2Q8IVF5 1701 aa29.62■■■□□ 2.33
CLIC3-203ENST00000494426 KAZALD1Q96I82 304 aa29.62■■■□□ 2.33
CLIC3-203ENST00000494426 USP44Q9H0E7 712 aa29.62■■■□□ 2.33
CLIC3-203ENST00000494426 FRAT1Q92837 279 aaPredicted RBP29.61■■■□□ 2.33
CLIC3-203ENST00000494426 SUCLG2Q96I99 432 aa29.61■■■□□ 2.33
CLIC3-203ENST00000494426 CCT4P50991 539 aaKnown RBP29.6■■■□□ 2.33
CLIC3-203ENST00000494426 IPO8O15397 1037 aaKnown RBP29.59■■■□□ 2.33
CLIC3-203ENST00000494426 TRIM27P14373 513 aa29.59■■■□□ 2.33
CLIC3-203ENST00000494426 FAM161AQ3B820 660 aa29.59■■■□□ 2.33
CLIC3-203ENST00000494426 ATF7IPQ6VMQ6 1270 aa29.59■■■□□ 2.33
CLIC3-203ENST00000494426 MPNDQ8N594 471 aa29.59■■■□□ 2.33
CLIC3-203ENST00000494426 RTFDC1Q9BY42 306 aaPredicted RBP29.59■■■□□ 2.33
CLIC3-203ENST00000494426 TMX4Q9H1E5 349 aaPredicted RBP29.59■■■□□ 2.33
CLIC3-203ENST00000494426 SPEF2Q9C093 1822 aa29.59■■■□□ 2.33
CLIC3-203ENST00000494426 ANKRD18AQ8IVF6 992 aa29.58■■■□□ 2.33
CLIC3-203ENST00000494426 DUOX1Q9NRD9 1551 aa29.57■■■□□ 2.32
CLIC3-203ENST00000494426 ITGA6P23229 1130 aa29.57■■■□□ 2.32
CLIC3-203ENST00000494426 IARSP41252 1262 aaKnown RBP29.57■■■□□ 2.32
CLIC3-203ENST00000494426 LMBR1LQ6UX01 489 aa29.57■■■□□ 2.32
CLIC3-203ENST00000494426 CDC5LQ99459 802 aaKnown RBP29.57■■■□□ 2.32
CLIC3-203ENST00000494426 LTBP1Q14766 1721 aa29.57■■■□□ 2.32
CLIC3-203ENST00000494426 ZC3H4Q9UPT8 1303 aaKnown RBP29.56■■■□□ 2.32
CLIC3-203ENST00000494426 GPSM2P81274 684 aa29.56■■■□□ 2.32
CLIC3-203ENST00000494426 INTS3Q68E01 1043 aaKnown RBP29.56■■■□□ 2.32
CLIC3-203ENST00000494426 DPP8Q6V1X1 898 aaPredicted RBP29.56■■■□□ 2.32
CLIC3-203ENST00000494426 COL4A5P29400 1685 aa29.56■■■□□ 2.32
CLIC3-203ENST00000494426 ZKSCAN2Q63HK3 967 aa29.55■■■□□ 2.32
CLIC3-203ENST00000494426 ZNF526Q8TF50 670 aaPredicted RBP29.55■■■□□ 2.32
CLIC3-203ENST00000494426 YTHDC1Q96MU7 727 aaKnown RBP29.54■■■□□ 2.32
CLIC3-203ENST00000494426 NSFL1CQ9UNZ2 370 aaKnown RBP29.54■■■□□ 2.32
CLIC3-203ENST00000494426 CLUAP1Q96AJ1 413 aa29.53■■■□□ 2.32
CLIC3-203ENST00000494426 BSDC1Q9NW68 430 aaPredicted RBP29.53■■■□□ 2.32
CLIC3-203ENST00000494426 ANKRD44Q8N8A2 993 aa29.52■■■□□ 2.32
CLIC3-203ENST00000494426 SUPT20HQ8NEM7 779 aa29.52■■■□□ 2.32
CLIC3-203ENST00000494426 BICC1Q9H694 974 aaKnown RBP29.52■■■□□ 2.32
CLIC3-203ENST00000494426 CHMP3Q9Y3E7 222 aa29.52■■■□□ 2.32
CLIC3-203ENST00000494426 ANKRD18BA2A2Z9 1011 aa29.51■■■□□ 2.31
CLIC3-203ENST00000494426 RABL6Q3YEC7 729 aaPredicted RBP29.51■■■□□ 2.31
CLIC3-203ENST00000494426 POLLQ9UGP5 575 aa29.51■■■□□ 2.31
CLIC3-203ENST00000494426 IFIT5Q13325 482 aaKnown RBP29.5■■■□□ 2.31
CLIC3-203ENST00000494426 VPS33BQ9H267 617 aa29.5■■■□□ 2.31
CLIC3-203ENST00000494426 PODXL2Q9NZ53 605 aa29.5■■■□□ 2.31
CLIC3-203ENST00000494426 MINPP1Q9UNW1 487 aa29.5■■■□□ 2.31
CLIC3-203ENST00000494426 IGHMBP2P38935 993 aaKnown RBP29.49■■■□□ 2.31
CLIC3-203ENST00000494426 AOC3Q16853 763 aa29.49■■■□□ 2.31
CLIC3-203ENST00000494426 GPBP1L1Q9HC44 474 aaPredicted RBP29.49■■■□□ 2.31
CLIC3-203ENST00000494426 GLTPD2A6NH11 291 aa29.48■■■□□ 2.31
CLIC3-203ENST00000494426 PPIP5K2O43314 1243 aa29.48■■■□□ 2.31
CLIC3-203ENST00000494426 LARGE2Q8N3Y3 721 aa29.48■■■□□ 2.31
CLIC3-203ENST00000494426 TBC1D16Q8TBP0 767 aa29.48■■■□□ 2.31
CLIC3-203ENST00000494426 MEIS3Q99687 375 aa29.48■■■□□ 2.31
CLIC3-203ENST00000494426 RCAN3Q9UKA8 241 aa29.48■■■□□ 2.31
CLIC3-203ENST00000494426 FZD9O00144 591 aa29.47■■■□□ 2.31
CLIC3-203ENST00000494426 KIAA2012Q0VF49 1180 aa29.47■■■□□ 2.31
CLIC3-203ENST00000494426 TMEM57Q8N5G2 664 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms