RNA–Protein interactions for RNA: ENST00000494377.7

PAX6-218, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,911 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-218ENST00000494377 DDX46Q7L014 1031 aaKnown RBP13.37□□□□□ -0.27
PAX6-218ENST00000494377 ZC3H4Q9UPT8 1303 aaKnown RBP13.37□□□□□ -0.27
PAX6-218ENST00000494377 SNED1Q8TER0 1413 aa13.37□□□□□ -0.27
PAX6-218ENST00000494377 PRKCSHP14314 528 aaPredicted RBP13.37□□□□□ -0.27
PAX6-218ENST00000494377 CC2D2BQ6DHV5 1058 aa13.37□□□□□ -0.27
PAX6-218ENST00000494377 NMRK2Q9NPI5 230 aa13.37□□□□□ -0.27
PAX6-218ENST00000494377 ZNF277Q9NRM2 450 aaPredicted RBP13.37□□□□□ -0.27
PAX6-218ENST00000494377 LAMB2P55268 1798 aa13.36□□□□□ -0.27
PAX6-218ENST00000494377 CACNA1FO60840 1977 aa13.36□□□□□ -0.27
PAX6-218ENST00000494377 DDX60Q8IY21 1712 aaKnown RBP13.36□□□□□ -0.27
PAX6-218ENST00000494377 NEURL1BA8MQ27 555 aa13.36□□□□□ -0.27
PAX6-218ENST00000494377 KIF3CO14782 793 aa13.36□□□□□ -0.27
PAX6-218ENST00000494377 BBOX1O75936 387 aa13.36□□□□□ -0.27
PAX6-218ENST00000494377 C1QTNF8P60827 252 aa13.36□□□□□ -0.27
PAX6-218ENST00000494377 DNAAF4Q8WXU2 420 aa13.36□□□□□ -0.27
PAX6-218ENST00000494377 ATP6V0A2Q9Y487 856 aa13.36□□□□□ -0.27
PAX6-218ENST00000494377 GRAPQ13588 217 aa13.35□□□□□ -0.27
PAX6-218ENST00000494377 TRMT2AQ8IZ69 625 aaKnown RBP13.35□□□□□ -0.27
PAX6-218ENST00000494377 GRAPLQ8TC17 118 aaPredicted RBP13.35□□□□□ -0.27
PAX6-218ENST00000494377 KDM2BQ8NHM5 1336 aa13.35□□□□□ -0.27
PAX6-218ENST00000494377 CEP350Q5VT06 3117 aa13.35□□□□□ -0.27
PAX6-218ENST00000494377 GLTPD2A6NH11 291 aa13.35□□□□□ -0.27
PAX6-218ENST00000494377 F6X3S4 739 aa13.35□□□□□ -0.27
PAX6-218ENST00000494377 PSMD1Q99460 953 aa13.35□□□□□ -0.27
PAX6-218ENST00000494377 TAF1P21675 1872 aa13.34□□□□□ -0.27
PAX6-218ENST00000494377 PDE8AO60658 829 aa13.34□□□□□ -0.27
PAX6-218ENST00000494377 HSP90B1P14625 803 aaKnown RBP13.34□□□□□ -0.27
PAX6-218ENST00000494377 SP8Q8IXZ3 490 aa13.34□□□□□ -0.27
PAX6-218ENST00000494377 CELF1Q92879 486 aaKnown RBP13.34□□□□□ -0.27
PAX6-218ENST00000494377 IARSP41252 1262 aaKnown RBP13.33□□□□□ -0.28
PAX6-218ENST00000494377 GCKRQ14397 625 aa13.33□□□□□ -0.28
PAX6-218ENST00000494377 GRIPAP1Q4V328 841 aa13.33□□□□□ -0.28
PAX6-218ENST00000494377 LINS1Q8NG48 757 aa13.33□□□□□ -0.28
PAX6-218ENST00000494377 TMX4Q9H1E5 349 aaPredicted RBP13.33□□□□□ -0.28
PAX6-218ENST00000494377 RRAGCQ9HB90 399 aa13.33□□□□□ -0.28
PAX6-218ENST00000494377 DICER1Q9UPY3 1922 aaKnown RBP13.33□□□□□ -0.28
PAX6-218ENST00000494377 CDHR2Q9BYE9 1310 aa13.33□□□□□ -0.28
PAX6-218ENST00000494377 H7C1W4 665 aa13.33□□□□□ -0.28
PAX6-218ENST00000494377 DPY19L2Q6NUT2 758 aa13.33□□□□□ -0.28
PAX6-218ENST00000494377 CCDC85AQ96PX6 553 aaPredicted RBP13.33□□□□□ -0.28
PAX6-218ENST00000494377 SEC31BQ9NQW1 1179 aa13.33□□□□□ -0.28
PAX6-218ENST00000494377 TIAM2Q8IVF5 1701 aa13.33□□□□□ -0.28
PAX6-218ENST00000494377 UBE3BQ7Z3V4 1068 aa13.32□□□□□ -0.28
PAX6-218ENST00000494377 MRPL50Q8N5N7 158 aaKnown RBP13.32□□□□□ -0.28
PAX6-218ENST00000494377 RPS8P62241 208 aaKnown RBP13.31□□□□□ -0.28
PAX6-218ENST00000494377 CCDC152Q4G0S7 254 aa13.31□□□□□ -0.28
PAX6-218ENST00000494377 BEND3Q5T5X7 828 aa13.31□□□□□ -0.28
PAX6-218ENST00000494377 SSH1Q8WYL5 1049 aa13.31□□□□□ -0.28
PAX6-218ENST00000494377 COL4A1P02462 1669 aa13.31□□□□□ -0.28
PAX6-218ENST00000494377 DDNO94850 711 aaPredicted RBP13.31□□□□□ -0.28
PAX6-218ENST00000494377 DPP8Q6V1X1 898 aaPredicted RBP13.31□□□□□ -0.28
PAX6-218ENST00000494377 TMC4Q7Z404 712 aa13.31□□□□□ -0.28
PAX6-218ENST00000494377 MPNDQ8N594 471 aa13.31□□□□□ -0.28
PAX6-218ENST00000494377 BCL2L13Q9BXK5 485 aa13.31□□□□□ -0.28
PAX6-218ENST00000494377 CASP7P55210 303 aa13.3□□□□□ -0.28
PAX6-218ENST00000494377 CTSWP56202 376 aa13.3□□□□□ -0.28
PAX6-218ENST00000494377 TTLL11Q8NHH1 800 aa13.3□□□□□ -0.28
PAX6-218ENST00000494377 RTFDC1Q9BY42 306 aaPredicted RBP13.3□□□□□ -0.28
PAX6-218ENST00000494377 POTECB2RU33 542 aa13.29□□□□□ -0.28
PAX6-218ENST00000494377 FZD9O00144 591 aa13.29□□□□□ -0.28
PAX6-218ENST00000494377 TOMM70O94826 608 aa13.29□□□□□ -0.28
PAX6-218ENST00000494377 VEGFAP15692 232 aaPredicted RBP13.29□□□□□ -0.28
PAX6-218ENST00000494377 SLC4A10Q6U841 1118 aa13.29□□□□□ -0.28
PAX6-218ENST00000494377 LARGE2Q8N3Y3 721 aa13.29□□□□□ -0.28
PAX6-218ENST00000494377 JDP2Q8WYK2 163 aa13.29□□□□□ -0.28
PAX6-218ENST00000494377 PPIP5K2O43314 1243 aa13.29□□□□□ -0.28
PAX6-218ENST00000494377 HNRNPUQ00839 825 aaKnown RBP eCLIP13.29□□□□□ -0.28
PAX6-218ENST00000494377 AOC3Q16853 763 aa13.29□□□□□ -0.28
PAX6-218ENST00000494377 NSFL1CQ9UNZ2 370 aaKnown RBP13.29□□□□□ -0.28
PAX6-218ENST00000494377 COL4A5P29400 1685 aa13.28□□□□□ -0.28
PAX6-218ENST00000494377 ZNF541Q9H0D2 1346 aa13.28□□□□□ -0.28
PAX6-218ENST00000494377 ALDH1L2Q3SY69 923 aa13.28□□□□□ -0.28
PAX6-218ENST00000494377 C16orf71Q8IYS4 520 aaPredicted RBP13.28□□□□□ -0.28
PAX6-218ENST00000494377 SUPT20HQ8NEM7 779 aa13.28□□□□□ -0.28
PAX6-218ENST00000494377 PLA2G12BQ9BX93 195 aa13.28□□□□□ -0.28
PAX6-218ENST00000494377 GREM2Q9H772 168 aa13.28□□□□□ -0.28
PAX6-218ENST00000494377 GPSM2P81274 684 aa13.27□□□□□ -0.28
PAX6-218ENST00000494377 VPS33BQ9H267 617 aa13.27□□□□□ -0.28
PAX6-218ENST00000494377 CT47B1P0C2W7 299 aaPredicted RBP13.27□□□□□ -0.29
PAX6-218ENST00000494377 ANKRD18AQ8IVF6 992 aa13.27□□□□□ -0.29
PAX6-218ENST00000494377 SRCIN1Q9C0H9 1055 aa13.27□□□□□ -0.29
PAX6-218ENST00000494377 SMC4Q9NTJ3 1288 aa13.27□□□□□ -0.29
PAX6-218ENST00000494377 PTPRCP08575 1304 aa13.26□□□□□ -0.29
PAX6-218ENST00000494377 GRM8O00222 908 aa13.26□□□□□ -0.29
PAX6-218ENST00000494377 CSF1RP07333 972 aa13.26□□□□□ -0.29
PAX6-218ENST00000494377 KIAA2012Q0VF49 1180 aa13.26□□□□□ -0.29
PAX6-218ENST00000494377 POLLQ9UGP5 575 aa13.26□□□□□ -0.29
PAX6-218ENST00000494377 LRRC37AA6NMS7 1700 aa13.26□□□□□ -0.29
PAX6-218ENST00000494377 RTL9Q8NET4 1388 aa13.25□□□□□ -0.29
PAX6-218ENST00000494377 ALDH1L1O75891 902 aa13.25□□□□□ -0.29
PAX6-218ENST00000494377 EIF6P56537 245 aaKnown RBP13.25□□□□□ -0.29
PAX6-218ENST00000494377 NIM1KQ8IY84 436 aa13.25□□□□□ -0.29
PAX6-218ENST00000494377 CDC5LQ99459 802 aaKnown RBP13.25□□□□□ -0.29
PAX6-218ENST00000494377 C9orf78Q9NZ63 289 aaPredicted RBP13.25□□□□□ -0.29
PAX6-218ENST00000494377 WDR90Q96KV7 1748 aa13.25□□□□□ -0.29
PAX6-218ENST00000494377 DUOX1Q9NRD9 1551 aa13.25□□□□□ -0.29
PAX6-218ENST00000494377 C6orf229H3BNL8 230 aa13.25□□□□□ -0.29
PAX6-218ENST00000494377 FOXO4P98177 505 aa13.25□□□□□ -0.29
PAX6-218ENST00000494377 FAM161AQ3B820 660 aa13.25□□□□□ -0.29
PAX6-218ENST00000494377 RBM46Q8TBY0 533 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms