RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 AKAP11Q9UKA4 1901 aa12.94□□□□□ -0.34
CLCN6-208ENST00000494028 COL4A1P02462 1669 aa12.93□□□□□ -0.34
CLCN6-208ENST00000494028 LAMA4Q16363 1823 aa12.93□□□□□ -0.34
CLCN6-208ENST00000494028 LOC102724428A0A0B4J2F2 783 aa12.93□□□□□ -0.34
CLCN6-208ENST00000494028 EYA2O00167 538 aa12.93□□□□□ -0.34
CLCN6-208ENST00000494028 HSPA4P34932 840 aa12.93□□□□□ -0.34
CLCN6-208ENST00000494028 SIK1P57059 783 aa12.93□□□□□ -0.34
CLCN6-208ENST00000494028 FAM98CQ17RN3 349 aaKnown RBP12.93□□□□□ -0.34
CLCN6-208ENST00000494028 MEX3CQ5U5Q3 659 aaKnown RBP12.93□□□□□ -0.34
CLCN6-208ENST00000494028 INTS5Q6P9B9 1019 aaKnown RBP12.93□□□□□ -0.34
CLCN6-208ENST00000494028 DZIP3Q86Y13 1208 aaKnown RBP12.93□□□□□ -0.34
CLCN6-208ENST00000494028 GPR108Q9NPR9 543 aa12.93□□□□□ -0.34
CLCN6-208ENST00000494028 SNRKQ9NRH2 765 aa12.93□□□□□ -0.34
CLCN6-208ENST00000494028 ERVV-1B6SEH8 477 aa12.92□□□□□ -0.34
CLCN6-208ENST00000494028 ST18O60284 1047 aa12.92□□□□□ -0.34
CLCN6-208ENST00000494028 ATP5JP18859 108 aa12.92□□□□□ -0.34
CLCN6-208ENST00000494028 GPTP24298 496 aa12.92□□□□□ -0.34
CLCN6-208ENST00000494028 IL15P40933 162 aaPredicted RBP12.92□□□□□ -0.34
CLCN6-208ENST00000494028 CRKLP46109 303 aaKnown RBP12.92□□□□□ -0.34
CLCN6-208ENST00000494028 EIF5P55010 431 aaKnown RBP12.92□□□□□ -0.34
CLCN6-208ENST00000494028 BOLA2Q9H3K6 86 aa12.92□□□□□ -0.34
CLCN6-208ENST00000494028 CCDC171Q6TFL3 1326 aa12.91□□□□□ -0.34
CLCN6-208ENST00000494028 BRWD3Q6RI45 1802 aa12.91□□□□□ -0.34
CLCN6-208ENST00000494028 A0A0G2JS52 829 aa12.91□□□□□ -0.34
CLCN6-208ENST00000494028 HIP1O00291 1037 aa12.91□□□□□ -0.34
CLCN6-208ENST00000494028 NMIQ13287 307 aaPredicted RBP12.91□□□□□ -0.34
CLCN6-208ENST00000494028 LRRC24Q50LG9 513 aa12.91□□□□□ -0.34
CLCN6-208ENST00000494028 CWC27Q6UX04 472 aaKnown RBP12.91□□□□□ -0.34
CLCN6-208ENST00000494028 RUFY2Q8WXA3 655 aa12.91□□□□□ -0.34
CLCN6-208ENST00000494028 FAM89AQ96GI7 184 aa12.91□□□□□ -0.34
CLCN6-208ENST00000494028 ZNF594Q96JF6 807 aaPredicted RBP12.91□□□□□ -0.34
CLCN6-208ENST00000494028 FSD1Q9BTV5 496 aa12.91□□□□□ -0.34
CLCN6-208ENST00000494028 USP21Q9UK80 565 aa12.91□□□□□ -0.34
CLCN6-208ENST00000494028 ABCC12Q96J65 1359 aa12.91□□□□□ -0.34
CLCN6-208ENST00000494028 A0A0D9SFI3 127 aa12.9□□□□□ -0.34
CLCN6-208ENST00000494028 CAMTA2O94983 1202 aa12.9□□□□□ -0.34
CLCN6-208ENST00000494028 CSF1RP07333 972 aa12.9□□□□□ -0.34
CLCN6-208ENST00000494028 CTSWP56202 376 aa12.9□□□□□ -0.34
CLCN6-208ENST00000494028 ZNF34Q8IZ26 560 aa12.9□□□□□ -0.34
CLCN6-208ENST00000494028 SMARCC1Q92922 1105 aaPredicted RBP12.9□□□□□ -0.34
CLCN6-208ENST00000494028 EDC3Q96F86 508 aaKnown RBP12.9□□□□□ -0.34
CLCN6-208ENST00000494028 FAM227BQ96M60 508 aa12.9□□□□□ -0.34
CLCN6-208ENST00000494028 PUS3Q9BZE2 481 aaKnown RBP12.9□□□□□ -0.34
CLCN6-208ENST00000494028 FOXD4L1Q9NU39 408 aa12.9□□□□□ -0.34
CLCN6-208ENST00000494028 FBXO3Q9UK99 471 aa12.9□□□□□ -0.34
CLCN6-208ENST00000494028 TNRC6CQ9HCJ0 1690 aaKnown RBP12.89□□□□□ -0.35
CLCN6-208ENST00000494028 MYO5AQ9Y4I1 1855 aaKnown RBP12.89□□□□□ -0.35
CLCN6-208ENST00000494028 KCNQ2O43526 872 aa12.89□□□□□ -0.35
CLCN6-208ENST00000494028 ATP6V1AP38606 617 aa12.89□□□□□ -0.35
CLCN6-208ENST00000494028 RAB3GAP1Q15042 981 aa12.89□□□□□ -0.35
CLCN6-208ENST00000494028 POTEAQ6S8J7 498 aa12.89□□□□□ -0.35
CLCN6-208ENST00000494028 HAUS7Q99871 368 aa12.89□□□□□ -0.35
CLCN6-208ENST00000494028 TBC1D2BQ9UPU7 963 aa12.89□□□□□ -0.35
CLCN6-208ENST00000494028 SNX14Q9Y5W7 946 aa12.89□□□□□ -0.35
CLCN6-208ENST00000494028 RPAP1Q9BWH6 1393 aaPredicted RBP12.89□□□□□ -0.35
CLCN6-208ENST00000494028 CNTNAP4Q9C0A0 1308 aa12.88□□□□□ -0.35
CLCN6-208ENST00000494028 HSP90AA1P07900 732 aaKnown RBP12.88□□□□□ -0.35
CLCN6-208ENST00000494028 PTH1RQ03431 593 aa12.88□□□□□ -0.35
CLCN6-208ENST00000494028 SYNE4Q8N205 404 aa12.88□□□□□ -0.35
CLCN6-208ENST00000494028 KCNB2Q92953 911 aa12.88□□□□□ -0.35
CLCN6-208ENST00000494028 UBR3Q6ZT12 1888 aa12.88□□□□□ -0.35
CLCN6-208ENST00000494028 A0A1B0GUL7 405 aa12.87□□□□□ -0.35
CLCN6-208ENST00000494028 IRS4O14654 1257 aaPredicted RBP12.87□□□□□ -0.35
CLCN6-208ENST00000494028 MCM2P49736 904 aa12.87□□□□□ -0.35
CLCN6-208ENST00000494028 CCDC57Q2TAC2 916 aa12.87□□□□□ -0.35
CLCN6-208ENST00000494028 KIAA1211Q6ZU35 1233 aa12.87□□□□□ -0.35
CLCN6-208ENST00000494028 LINC00116Q8NCU8 138 aa12.87□□□□□ -0.35
CLCN6-208ENST00000494028 CCDC85AQ96PX6 553 aaPredicted RBP12.87□□□□□ -0.35
CLCN6-208ENST00000494028 UPF3BQ9BZI7 483 aaKnown RBP12.87□□□□□ -0.35
CLCN6-208ENST00000494028 SH3TC1Q8TE82 1336 aa12.87□□□□□ -0.35
CLCN6-208ENST00000494028 RTL9Q8NET4 1388 aa12.86□□□□□ -0.35
CLCN6-208ENST00000494028 MCM4P33991 863 aa12.86□□□□□ -0.35
CLCN6-208ENST00000494028 NEK4P51957 841 aa12.86□□□□□ -0.35
CLCN6-208ENST00000494028 IFIT5Q13325 482 aaKnown RBP12.86□□□□□ -0.35
CLCN6-208ENST00000494028 CUL4AQ13619 759 aa12.86□□□□□ -0.35
CLCN6-208ENST00000494028 ZNF589Q86UQ0 364 aaPredicted RBP12.86□□□□□ -0.35
CLCN6-208ENST00000494028 RASEFQ8IZ41 740 aa12.86□□□□□ -0.35
CLCN6-208ENST00000494028 TTLL11Q8NHH1 800 aa12.86□□□□□ -0.35
CLCN6-208ENST00000494028 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.86□□□□□ -0.35
CLCN6-208ENST00000494028 TTC14Q96N46 770 aa12.86□□□□□ -0.35
CLCN6-208ENST00000494028 ARXQ96QS3 562 aa12.86□□□□□ -0.35
CLCN6-208ENST00000494028 DNAJC2Q99543 621 aaKnown RBP12.86□□□□□ -0.35
CLCN6-208ENST00000494028 GREM2Q9H772 168 aa12.86□□□□□ -0.35
CLCN6-208ENST00000494028 RBM8AQ9Y5S9 174 aaKnown RBP12.86□□□□□ -0.35
CLCN6-208ENST00000494028 NDUFB9Q9Y6M9 179 aa12.86□□□□□ -0.35
CLCN6-208ENST00000494028 PDE8AO60658 829 aa12.85□□□□□ -0.35
CLCN6-208ENST00000494028 NTSR2O95665 410 aa12.85□□□□□ -0.35
CLCN6-208ENST00000494028 CYP2E1P05181 493 aaPredicted RBP12.85□□□□□ -0.35
CLCN6-208ENST00000494028 ITGA6P23229 1130 aa12.85□□□□□ -0.35
CLCN6-208ENST00000494028 ADORA1P30542 326 aa12.85□□□□□ -0.35
CLCN6-208ENST00000494028 DEKP35659 375 aaKnown RBP12.85□□□□□ -0.35
CLCN6-208ENST00000494028 TAF7LQ5H9L4 462 aa12.85□□□□□ -0.35
CLCN6-208ENST00000494028 DDX46Q7L014 1031 aaKnown RBP12.85□□□□□ -0.35
CLCN6-208ENST00000494028 ZGPATQ8N5A5 531 aaKnown RBP12.85□□□□□ -0.35
CLCN6-208ENST00000494028 KBTBD3Q8NAB2 608 aa12.85□□□□□ -0.35
CLCN6-208ENST00000494028 TNPO1Q92973 898 aaKnown RBP12.85□□□□□ -0.35
CLCN6-208ENST00000494028 TMX3Q96JJ7 454 aa12.85□□□□□ -0.35
CLCN6-208ENST00000494028 QTRT2Q9H974 415 aaKnown RBP12.85□□□□□ -0.35
CLCN6-208ENST00000494028 TRMT112Q9UI30 125 aaKnown RBP12.85□□□□□ -0.35
CLCN6-208ENST00000494028 TRPC5Q9UL62 973 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms