RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 ATF7IPQ6VMQ6 1270 aa12.78□□□□□ -0.36
RFC2-211ENST00000494019 ZNF219Q9P2Y4 722 aaPredicted RBP12.78□□□□□ -0.36
RFC2-211ENST00000494019 TNNQ9UQP3 1299 aa12.78□□□□□ -0.36
RFC2-211ENST00000494019 HOXA10P31260 410 aaPredicted RBP12.77□□□□□ -0.37
RFC2-211ENST00000494019 CCT4P50991 539 aaKnown RBP12.77□□□□□ -0.37
RFC2-211ENST00000494019 CASP7P55210 303 aa12.77□□□□□ -0.37
RFC2-211ENST00000494019 CTSWP56202 376 aa12.77□□□□□ -0.37
RFC2-211ENST00000494019 SF3B3Q15393 1217 aaKnown RBP12.77□□□□□ -0.37
RFC2-211ENST00000494019 DDX46Q7L014 1031 aaKnown RBP12.77□□□□□ -0.37
RFC2-211ENST00000494019 CLUAP1Q96AJ1 413 aa12.77□□□□□ -0.37
RFC2-211ENST00000494019 CCDC85AQ96PX6 553 aaPredicted RBP12.77□□□□□ -0.37
RFC2-211ENST00000494019 LTBP1Q14766 1721 aa12.76□□□□□ -0.37
RFC2-211ENST00000494019 PPEF1O14829 653 aaPredicted RBP12.76□□□□□ -0.37
RFC2-211ENST00000494019 C21orf2O43822 256 aa12.76□□□□□ -0.37
RFC2-211ENST00000494019 CCDC152Q4G0S7 254 aa12.76□□□□□ -0.37
RFC2-211ENST00000494019 CRAMP1Q96RY5 1269 aa12.76□□□□□ -0.37
RFC2-211ENST00000494019 NBPF7P0C2Y1 421 aaPredicted RBP12.75□□□□□ -0.37
RFC2-211ENST00000494019 GRAPQ13588 217 aa12.75□□□□□ -0.37
RFC2-211ENST00000494019 ARHGAP27Q6ZUM4 889 aa12.75□□□□□ -0.37
RFC2-211ENST00000494019 FTSJ3Q8IY81 847 aaKnown RBP12.75□□□□□ -0.37
RFC2-211ENST00000494019 GRAPLQ8TC17 118 aaPredicted RBP12.75□□□□□ -0.37
RFC2-211ENST00000494019 PLA2G12BQ9BX93 195 aa12.75□□□□□ -0.37
RFC2-211ENST00000494019 UTYO14607 1347 aa12.74□□□□□ -0.37
RFC2-211ENST00000494019 CCDC93Q567U6 631 aa12.74□□□□□ -0.37
RFC2-211ENST00000494019 SOGA3Q5TF21 947 aa12.74□□□□□ -0.37
RFC2-211ENST00000494019 INTS3Q68E01 1043 aaKnown RBP12.74□□□□□ -0.37
RFC2-211ENST00000494019 TTLL11Q8NHH1 800 aa12.74□□□□□ -0.37
RFC2-211ENST00000494019 CELF1Q92879 486 aaKnown RBP12.74□□□□□ -0.37
RFC2-211ENST00000494019 SUCLG2Q96I99 432 aa12.74□□□□□ -0.37
RFC2-211ENST00000494019 SEC31BQ9NQW1 1179 aa12.74□□□□□ -0.37
RFC2-211ENST00000494019 RTL9Q8NET4 1388 aa12.73□□□□□ -0.37
RFC2-211ENST00000494019 RASSF7Q02833 373 aa12.73□□□□□ -0.37
RFC2-211ENST00000494019 FAM161AQ3B820 660 aa12.73□□□□□ -0.37
RFC2-211ENST00000494019 OLFM4Q6UX06 510 aa12.73□□□□□ -0.37
RFC2-211ENST00000494019 SLC51AQ86UW1 340 aa12.73□□□□□ -0.37
RFC2-211ENST00000494019 DZIP1LQ8IYY4 767 aaKnown RBP12.73□□□□□ -0.37
RFC2-211ENST00000494019 TMEM57Q8N5G2 664 aa12.73□□□□□ -0.37
RFC2-211ENST00000494019 USP44Q9H0E7 712 aa12.73□□□□□ -0.37
RFC2-211ENST00000494019 GREM2Q9H772 168 aa12.73□□□□□ -0.37
RFC2-211ENST00000494019 CHMP3Q9Y3E7 222 aa12.73□□□□□ -0.37
RFC2-211ENST00000494019 DUOX1Q9NRD9 1551 aa12.73□□□□□ -0.37
RFC2-211ENST00000494019 UTRNP46939 3433 aa12.72□□□□□ -0.37
RFC2-211ENST00000494019 SNED1Q8TER0 1413 aa12.72□□□□□ -0.37
RFC2-211ENST00000494019 UBTFL1P0CB47 393 aaPredicted RBP12.72□□□□□ -0.37
RFC2-211ENST00000494019 FOXO4P98177 505 aa12.72□□□□□ -0.37
RFC2-211ENST00000494019 EPHA10Q5JZY3 1008 aa12.72□□□□□ -0.37
RFC2-211ENST00000494019 C7orf43Q8WVR3 580 aa12.72□□□□□ -0.37
RFC2-211ENST00000494019 CDC5LQ99459 802 aaKnown RBP12.72□□□□□ -0.37
RFC2-211ENST00000494019 TMX4Q9H1E5 349 aaPredicted RBP12.72□□□□□ -0.37
RFC2-211ENST00000494019 NFKBIEO00221 500 aa12.71□□□□□ -0.37
RFC2-211ENST00000494019 PLIN1O60240 522 aa12.71□□□□□ -0.37
RFC2-211ENST00000494019 BBOX1O75936 387 aa12.71□□□□□ -0.37
RFC2-211ENST00000494019 RLBP1P12271 317 aa12.71□□□□□ -0.37
RFC2-211ENST00000494019 ITGA6P23229 1130 aa12.71□□□□□ -0.37
RFC2-211ENST00000494019 LMBR1LQ6UX01 489 aa12.71□□□□□ -0.37
RFC2-211ENST00000494019 ANKRD18AQ8IVF6 992 aa12.71□□□□□ -0.37
RFC2-211ENST00000494019 ITPRIPQ8IWB1 547 aa12.71□□□□□ -0.37
RFC2-211ENST00000494019 MEIS3Q99687 375 aa12.71□□□□□ -0.37
RFC2-211ENST00000494019 TAOK3Q9H2K8 898 aa12.71□□□□□ -0.37
RFC2-211ENST00000494019 BICC1Q9H694 974 aaKnown RBP12.71□□□□□ -0.37
RFC2-211ENST00000494019 ATP6V0A2Q9Y487 856 aa12.71□□□□□ -0.37
RFC2-211ENST00000494019 CSF1RP07333 972 aa12.7□□□□□ -0.38
RFC2-211ENST00000494019 MS4A1P11836 297 aa12.7□□□□□ -0.38
RFC2-211ENST00000494019 RPS8P62241 208 aaKnown RBP12.7□□□□□ -0.38
RFC2-211ENST00000494019 CC2D2BQ6DHV5 1058 aa12.7□□□□□ -0.38
RFC2-211ENST00000494019 TMC4Q7Z404 712 aa12.7□□□□□ -0.38
RFC2-211ENST00000494019 RTKN2Q8IZC4 609 aa12.7□□□□□ -0.38
RFC2-211ENST00000494019 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.7□□□□□ -0.38
RFC2-211ENST00000494019 PANK1Q8TE04 598 aa12.7□□□□□ -0.38
RFC2-211ENST00000494019 KAZALD1Q96I82 304 aa12.7□□□□□ -0.38
RFC2-211ENST00000494019 LTBP3Q9NS15 1303 aa12.69□□□□□ -0.38
RFC2-211ENST00000494019 ANKRD18BA2A2Z9 1011 aa12.69□□□□□ -0.38
RFC2-211ENST00000494019 GNAI3P08754 354 aa12.69□□□□□ -0.38
RFC2-211ENST00000494019 IGHMBP2P38935 993 aaKnown RBP12.69□□□□□ -0.38
RFC2-211ENST00000494019 IFIT5Q13325 482 aaKnown RBP12.69□□□□□ -0.38
RFC2-211ENST00000494019 SP8Q8IXZ3 490 aa12.69□□□□□ -0.38
RFC2-211ENST00000494019 ANKRD44Q8N8A2 993 aa12.69□□□□□ -0.38
RFC2-211ENST00000494019 LRRFIP2Q9Y608 721 aaKnown RBP12.69□□□□□ -0.38
RFC2-211ENST00000494019 PSME4Q14997 1843 aa12.68□□□□□ -0.38
RFC2-211ENST00000494019 FKBP4Q02790 459 aaKnown RBP eCLIP12.68□□□□□ -0.38
RFC2-211ENST00000494019 CCDC57Q2TAC2 916 aa12.68□□□□□ -0.38
RFC2-211ENST00000494019 RABL6Q3YEC7 729 aaPredicted RBP12.68□□□□□ -0.38
RFC2-211ENST00000494019 TAF7LQ5H9L4 462 aa12.68□□□□□ -0.38
RFC2-211ENST00000494019 RNF181Q9P0P0 153 aa12.68□□□□□ -0.38
RFC2-211ENST00000494019 HDAC5Q9UQL6 1122 aa12.68□□□□□ -0.38
RFC2-211ENST00000494019 MYH13Q9UKX3 1938 aa12.68□□□□□ -0.38
RFC2-211ENST00000494019 LMNB1P20700 586 aa12.67□□□□□ -0.38
RFC2-211ENST00000494019 PRELPP51888 382 aa12.67□□□□□ -0.38
RFC2-211ENST00000494019 GRIPAP1Q4V328 841 aa12.67□□□□□ -0.38
RFC2-211ENST00000494019 C9orf131Q5VYM1 1079 aa12.67□□□□□ -0.38
RFC2-211ENST00000494019 DPP8Q6V1X1 898 aaPredicted RBP12.67□□□□□ -0.38
RFC2-211ENST00000494019 MPNDQ8N594 471 aa12.67□□□□□ -0.38
RFC2-211ENST00000494019 PSMD1Q99460 953 aa12.67□□□□□ -0.38
RFC2-211ENST00000494019 MPHOSPH8Q99549 860 aa12.67□□□□□ -0.38
RFC2-211ENST00000494019 COL4A5P29400 1685 aa12.67□□□□□ -0.38
RFC2-211ENST00000494019 YY1P25490 414 aa12.66□□□□□ -0.38
RFC2-211ENST00000494019 RRP1P56182 461 aaKnown RBP12.66□□□□□ -0.38
RFC2-211ENST00000494019 MVPQ14764 893 aaKnown RBP12.66□□□□□ -0.38
RFC2-211ENST00000494019 ZNF594Q96JF6 807 aaPredicted RBP12.66□□□□□ -0.38
RFC2-211ENST00000494019 ZNF277Q9NRM2 450 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms