RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 CABP1Q9NZU7 370 aa7.88□□□□□ -1.15
CPSF7-213ENST00000494016 PCDHB11Q9Y5F2 797 aa7.88□□□□□ -1.15
CPSF7-213ENST00000494016 NSD2O96028 1365 aa7.87□□□□□ -1.15
CPSF7-213ENST00000494016 ATAD2Q6PL18 1390 aa7.87□□□□□ -1.15
CPSF7-213ENST00000494016 PIK3CDO00329 1044 aa7.87□□□□□ -1.15
CPSF7-213ENST00000494016 ERVK-9P63128 1117 aa7.87□□□□□ -1.15
CPSF7-213ENST00000494016 MAP7D1Q3KQU3 841 aa7.87□□□□□ -1.15
CPSF7-213ENST00000494016 TSGA10IPQ3SY00 556 aa7.87□□□□□ -1.15
CPSF7-213ENST00000494016 Q6ZVU0 165 aa7.87□□□□□ -1.15
CPSF7-213ENST00000494016 MEIOBQ8N635 442 aa7.87□□□□□ -1.15
CPSF7-213ENST00000494016 EXOC6Q8TAG9 804 aa7.87□□□□□ -1.15
CPSF7-213ENST00000494016 UCN2Q96RP3 112 aa7.87□□□□□ -1.15
CPSF7-213ENST00000494016 TERF2IPQ9NYB0 399 aa7.87□□□□□ -1.15
CPSF7-213ENST00000494016 RGS17Q9UGC6 210 aaPredicted RBP7.87□□□□□ -1.15
CPSF7-213ENST00000494016 FAM181BA6NEQ2 426 aa7.86□□□□□ -1.15
CPSF7-213ENST00000494016 PLIN1O60240 522 aa7.86□□□□□ -1.15
CPSF7-213ENST00000494016 CBLBQ13191 982 aa7.86□□□□□ -1.15
CPSF7-213ENST00000494016 TXNDC2Q86VQ3 553 aa7.86□□□□□ -1.15
CPSF7-213ENST00000494016 NGEFQ8N5V2 710 aa7.86□□□□□ -1.15
CPSF7-213ENST00000494016 PLPP7Q8NBV4 271 aa7.86□□□□□ -1.15
CPSF7-213ENST00000494016 RUNDC1Q96C34 613 aa7.86□□□□□ -1.15
CPSF7-213ENST00000494016 CALR3Q96L12 384 aaKnown RBP7.86□□□□□ -1.15
CPSF7-213ENST00000494016 CDCA7Q9BWT1 371 aaPredicted RBP7.86□□□□□ -1.15
CPSF7-213ENST00000494016 CYLDQ9NQC7 956 aa7.86□□□□□ -1.15
CPSF7-213ENST00000494016 DOLKQ9UPQ8 538 aa7.86□□□□□ -1.15
CPSF7-213ENST00000494016 RBM19Q9Y4C8 960 aaKnown RBP7.86□□□□□ -1.15
CPSF7-213ENST00000494016 WASLO00401 505 aaPredicted RBP7.85□□□□□ -1.15
CPSF7-213ENST00000494016 ADD1P35611 737 aaKnown RBP7.85□□□□□ -1.15
CPSF7-213ENST00000494016 SCTRP47872 440 aa7.85□□□□□ -1.15
CPSF7-213ENST00000494016 CC2D2BQ6DHV5 1058 aa7.85□□□□□ -1.15
CPSF7-213ENST00000494016 TRIM46Q7Z4K8 759 aa7.85□□□□□ -1.15
CPSF7-213ENST00000494016 HDGFL2Q7Z4V5 671 aaPredicted RBP7.85□□□□□ -1.15
CPSF7-213ENST00000494016 GGNBP2Q9H3C7 697 aa7.85□□□□□ -1.15
CPSF7-213ENST00000494016 ATP13A2Q9NQ11 1180 aa7.85□□□□□ -1.15
CPSF7-213ENST00000494016 ANKRD26Q9UPS8 1709 aa7.85□□□□□ -1.15
CPSF7-213ENST00000494016 FAM135BQ49AJ0 1406 aa7.85□□□□□ -1.15
CPSF7-213ENST00000494016 ADAMTS13Q76LX8 1427 aa7.85□□□□□ -1.15
CPSF7-213ENST00000494016 CHD2O14647 1828 aaKnown RBP7.85□□□□□ -1.15
CPSF7-213ENST00000494016 KNDC1Q76NI1 1749 aa7.84□□□□□ -1.15
CPSF7-213ENST00000494016 ZBTB7CA1YPR0 619 aa7.84□□□□□ -1.15
CPSF7-213ENST00000494016 SKIP12755 728 aa7.84□□□□□ -1.15
CPSF7-213ENST00000494016 BMP1P13497 986 aa7.84□□□□□ -1.15
CPSF7-213ENST00000494016 MRPL14Q6P1L8 145 aaKnown RBP7.84□□□□□ -1.15
CPSF7-213ENST00000494016 CCDC136Q96JN2 1154 aa7.84□□□□□ -1.15
CPSF7-213ENST00000494016 CFAP53Q96M91 514 aa7.84□□□□□ -1.15
CPSF7-213ENST00000494016 TECPR2O15040 1411 aa7.84□□□□□ -1.15
CPSF7-213ENST00000494016 NKTRP30414 1462 aaKnown RBP7.83□□□□□ -1.16
CPSF7-213ENST00000494016 ADH1AP07327 375 aa7.83□□□□□ -1.16
CPSF7-213ENST00000494016 C20orf194Q5TEA3 1177 aa7.83□□□□□ -1.16
CPSF7-213ENST00000494016 TBC1D9Q6ZT07 1266 aa7.83□□□□□ -1.16
CPSF7-213ENST00000494016 TCP11L2Q8N4U5 519 aa7.83□□□□□ -1.16
CPSF7-213ENST00000494016 TSEN34Q9BSV6 310 aaKnown RBP7.83□□□□□ -1.16
CPSF7-213ENST00000494016 CPSF1Q10570 1443 aaKnown RBP7.83□□□□□ -1.16
CPSF7-213ENST00000494016 DIP2AQ14689 1571 aa7.83□□□□□ -1.16
CPSF7-213ENST00000494016 PLEKHG1Q9ULL1 1385 aa7.83□□□□□ -1.16
CPSF7-213ENST00000494016 COL3A1P02461 1466 aaPredicted RBP7.82□□□□□ -1.16
CPSF7-213ENST00000494016 E9PSI1 815 aa7.82□□□□□ -1.16
CPSF7-213ENST00000494016 TERTO14746 1132 aaKnown RBP7.82□□□□□ -1.16
CPSF7-213ENST00000494016 ATP9BO43861 1147 aa7.82□□□□□ -1.16
CPSF7-213ENST00000494016 LZTS3O60299 673 aaPredicted RBP7.82□□□□□ -1.16
CPSF7-213ENST00000494016 USP4Q13107 963 aa7.82□□□□□ -1.16
CPSF7-213ENST00000494016 CCDC27Q2M243 656 aa7.82□□□□□ -1.16
CPSF7-213ENST00000494016 POTEAQ6S8J7 498 aa7.82□□□□□ -1.16
CPSF7-213ENST00000494016 WDR63Q8IWG1 891 aa7.82□□□□□ -1.16
CPSF7-213ENST00000494016 XRN1Q8IZH2 1706 aaKnown RBP7.82□□□□□ -1.16
CPSF7-213ENST00000494016 LINC00528Q8N1L1 170 aa7.82□□□□□ -1.16
CPSF7-213ENST00000494016 KDF1Q8NAX2 398 aaPredicted RBP7.82□□□□□ -1.16
CPSF7-213ENST00000494016 NUDT16Q96DE0 195 aaKnown RBP7.82□□□□□ -1.16
CPSF7-213ENST00000494016 PLEKHF1Q96S99 279 aa7.82□□□□□ -1.16
CPSF7-213ENST00000494016 CRBNQ96SW2 442 aa7.82□□□□□ -1.16
CPSF7-213ENST00000494016 OSBPL3Q9H4L5 887 aa7.82□□□□□ -1.16
CPSF7-213ENST00000494016 KIF20BQ96Q89 1820 aa7.82□□□□□ -1.16
CPSF7-213ENST00000494016 ROBO1Q9Y6N7 1651 aa7.82□□□□□ -1.16
CPSF7-213ENST00000494016 PNPLA6Q8IY17 1366 aa7.82□□□□□ -1.16
CPSF7-213ENST00000494016 ROBO2Q9HCK4 1378 aa7.82□□□□□ -1.16
CPSF7-213ENST00000494016 ATP7BP35670 1465 aa7.81□□□□□ -1.16
CPSF7-213ENST00000494016 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.81□□□□□ -1.16
CPSF7-213ENST00000494016 PTPRUQ92729 1446 aa7.81□□□□□ -1.16
CPSF7-213ENST00000494016 USP17L5A8MUK1 530 aa7.81□□□□□ -1.16
CPSF7-213ENST00000494016 MYCP01106 439 aaPredicted RBP7.81□□□□□ -1.16
CPSF7-213ENST00000494016 FBLN1P23142 703 aa7.81□□□□□ -1.16
CPSF7-213ENST00000494016 SCARF1Q14162 830 aa7.81□□□□□ -1.16
CPSF7-213ENST00000494016 SUZ12Q15022 739 aaKnown RBP7.81□□□□□ -1.16
CPSF7-213ENST00000494016 OXLD1Q5BKU9 147 aa7.81□□□□□ -1.16
CPSF7-213ENST00000494016 PLEKHM2Q8IWE5 1019 aa7.81□□□□□ -1.16
CPSF7-213ENST00000494016 AGBL1Q96MI9 1066 aa7.81□□□□□ -1.16
CPSF7-213ENST00000494016 SLC26A8Q96RN1 970 aa7.81□□□□□ -1.16
CPSF7-213ENST00000494016 RRP7AQ9Y3A4 280 aaKnown RBP7.81□□□□□ -1.16
CPSF7-213ENST00000494016 TBX22Q9Y458 520 aa7.81□□□□□ -1.16
CPSF7-213ENST00000494016 EID1Q9Y6B2 187 aa7.81□□□□□ -1.16
CPSF7-213ENST00000494016 TMEM94Q12767 1356 aa7.81□□□□□ -1.16
CPSF7-213ENST00000494016 PRR36Q9H6K5 1346 aa7.8□□□□□ -1.16
CPSF7-213ENST00000494016 MAP2P11137 1827 aaKnown RBP7.8□□□□□ -1.16
CPSF7-213ENST00000494016 PPIP5K1Q6PFW1 1433 aa7.8□□□□□ -1.16
CPSF7-213ENST00000494016 UPP2O95045 317 aa7.8□□□□□ -1.16
CPSF7-213ENST00000494016 U2AF1L5P0DN76 240 aaPredicted RBP7.8□□□□□ -1.16
CPSF7-213ENST00000494016 SNRPBP14678 240 aaKnown RBP7.8□□□□□ -1.16
CPSF7-213ENST00000494016 U2AF1Q01081 240 aaKnown RBP eCLIP7.8□□□□□ -1.16
CPSF7-213ENST00000494016 LCE2CQ5TA81 110 aa7.8□□□□□ -1.16
CPSF7-213ENST00000494016 CYP2U1Q7Z449 544 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms