RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 IARSP41252 1262 aaKnown RBP28.9■■■□□ 2.22
SNIP1-203ENST00000493916 SLC51AQ86UW1 340 aa28.9■■■□□ 2.22
SNIP1-203ENST00000493916 LRRC37AA6NMS7 1700 aa28.89■■■□□ 2.22
SNIP1-203ENST00000493916 CWF19L2Q2TBE0 894 aaKnown RBP28.89■■■□□ 2.22
SNIP1-203ENST00000493916 SP8Q8IXZ3 490 aa28.89■■■□□ 2.22
SNIP1-203ENST00000493916 PDE8AO60658 829 aa28.88■■■□□ 2.21
SNIP1-203ENST00000493916 DPY19L2Q6NUT2 758 aa28.88■■■□□ 2.21
SNIP1-203ENST00000493916 WDR90Q96KV7 1748 aa28.88■■■□□ 2.21
SNIP1-203ENST00000493916 TRMT2AQ8IZ69 625 aaKnown RBP28.87■■■□□ 2.21
SNIP1-203ENST00000493916 LINS1Q8NG48 757 aa28.87■■■□□ 2.21
SNIP1-203ENST00000493916 CDCA7LQ96GN5 454 aa28.86■■■□□ 2.21
SNIP1-203ENST00000493916 TAF1P21675 1872 aa28.86■■■□□ 2.21
SNIP1-203ENST00000493916 GCKRQ14397 625 aa28.85■■■□□ 2.21
SNIP1-203ENST00000493916 JARID2Q92833 1246 aaPredicted RBP28.85■■■□□ 2.21
SNIP1-203ENST00000493916 RTFDC1Q9BY42 306 aaPredicted RBP28.85■■■□□ 2.21
SNIP1-203ENST00000493916 RRAGCQ9HB90 399 aa28.85■■■□□ 2.21
SNIP1-203ENST00000493916 COL4A1P02462 1669 aa28.85■■■□□ 2.21
SNIP1-203ENST00000493916 H7C1W4 665 aa28.84■■■□□ 2.21
SNIP1-203ENST00000493916 TOMM70O94826 608 aa28.84■■■□□ 2.21
SNIP1-203ENST00000493916 CCDC152Q4G0S7 254 aa28.84■■■□□ 2.21
SNIP1-203ENST00000493916 CELF1Q92879 486 aaKnown RBP28.84■■■□□ 2.21
SNIP1-203ENST00000493916 VPS33BQ9H267 617 aa28.83■■■□□ 2.21
SNIP1-203ENST00000493916 COL4A5P29400 1685 aa28.83■■■□□ 2.21
SNIP1-203ENST00000493916 FZD9O00144 591 aa28.82■■■□□ 2.2
SNIP1-203ENST00000493916 DPP8Q6V1X1 898 aaPredicted RBP28.82■■■□□ 2.2
SNIP1-203ENST00000493916 SUPT20HQ8NEM7 779 aa28.82■■■□□ 2.2
SNIP1-203ENST00000493916 F6X3S4 739 aa28.81■■■□□ 2.2
SNIP1-203ENST00000493916 VEGFAP15692 232 aaPredicted RBP28.81■■■□□ 2.2
SNIP1-203ENST00000493916 CTSWP56202 376 aa28.81■■■□□ 2.2
SNIP1-203ENST00000493916 UBE3BQ7Z3V4 1068 aa28.81■■■□□ 2.2
SNIP1-203ENST00000493916 MPNDQ8N594 471 aa28.81■■■□□ 2.2
SNIP1-203ENST00000493916 JDP2Q8WYK2 163 aa28.81■■■□□ 2.2
SNIP1-203ENST00000493916 DUOX1Q9NRD9 1551 aa28.8■■■□□ 2.2
SNIP1-203ENST00000493916 ZNF541Q9H0D2 1346 aa28.8■■■□□ 2.2
SNIP1-203ENST00000493916 RPS8P62241 208 aaKnown RBP28.8■■■□□ 2.2
SNIP1-203ENST00000493916 BEND3Q5T5X7 828 aa28.8■■■□□ 2.2
SNIP1-203ENST00000493916 C16orf71Q8IYS4 520 aaPredicted RBP28.8■■■□□ 2.2
SNIP1-203ENST00000493916 MRPL50Q8N5N7 158 aaKnown RBP28.8■■■□□ 2.2
SNIP1-203ENST00000493916 MYH3P11055 1940 aa28.79■■■□□ 2.2
SNIP1-203ENST00000493916 RTL9Q8NET4 1388 aa28.79■■■□□ 2.2
SNIP1-203ENST00000493916 CASP7P55210 303 aa28.79■■■□□ 2.2
SNIP1-203ENST00000493916 LARGE2Q8N3Y3 721 aa28.79■■■□□ 2.2
SNIP1-203ENST00000493916 RBM46Q8TBY0 533 aaKnown RBP28.79■■■□□ 2.2
SNIP1-203ENST00000493916 SEC31BQ9NQW1 1179 aa28.79■■■□□ 2.2
SNIP1-203ENST00000493916 POTECB2RU33 542 aa28.78■■■□□ 2.2
SNIP1-203ENST00000493916 DDNO94850 711 aaPredicted RBP28.78■■■□□ 2.2
SNIP1-203ENST00000493916 L3MBTL3Q96JM7 780 aaPredicted RBP28.78■■■□□ 2.2
SNIP1-203ENST00000493916 PLA2G12BQ9BX93 195 aa28.78■■■□□ 2.2
SNIP1-203ENST00000493916 LTBP1Q14766 1721 aa28.77■■■□□ 2.2
SNIP1-203ENST00000493916 PPIP5K2O43314 1243 aa28.77■■■□□ 2.2
SNIP1-203ENST00000493916 CT47B1P0C2W7 299 aaPredicted RBP28.77■■■□□ 2.2
SNIP1-203ENST00000493916 TTLL11Q8NHH1 800 aa28.77■■■□□ 2.2
SNIP1-203ENST00000493916 ALDH1L2Q3SY69 923 aa28.76■■■□□ 2.19
SNIP1-203ENST00000493916 SSH1Q8WYL5 1049 aa28.76■■■□□ 2.19
SNIP1-203ENST00000493916 PTPRCP08575 1304 aa28.75■■■□□ 2.19
SNIP1-203ENST00000493916 AOC3Q16853 763 aa28.75■■■□□ 2.19
SNIP1-203ENST00000493916 CCDC85AQ96PX6 553 aaPredicted RBP28.75■■■□□ 2.19
SNIP1-203ENST00000493916 KIAA2012Q0VF49 1180 aa28.74■■■□□ 2.19
SNIP1-203ENST00000493916 NIM1KQ8IY84 436 aa28.74■■■□□ 2.19
SNIP1-203ENST00000493916 ALDH1L1O75891 902 aa28.73■■■□□ 2.19
SNIP1-203ENST00000493916 GPC2Q8N158 579 aa28.73■■■□□ 2.19
SNIP1-203ENST00000493916 CDC5LQ99459 802 aaKnown RBP28.73■■■□□ 2.19
SNIP1-203ENST00000493916 GREM2Q9H772 168 aa28.73■■■□□ 2.19
SNIP1-203ENST00000493916 SCN4AP35499 1836 aa28.72■■■□□ 2.19
SNIP1-203ENST00000493916 EIF6P56537 245 aaKnown RBP28.72■■■□□ 2.19
SNIP1-203ENST00000493916 GPSM2P81274 684 aa28.72■■■□□ 2.19
SNIP1-203ENST00000493916 FSTL1Q12841 308 aa28.72■■■□□ 2.19
SNIP1-203ENST00000493916 ANKRD18AQ8IVF6 992 aa28.72■■■□□ 2.19
SNIP1-203ENST00000493916 NSFL1CQ9UNZ2 370 aaKnown RBP28.72■■■□□ 2.19
SNIP1-203ENST00000493916 IQCA1LA6NCM1 817 aa28.71■■■□□ 2.19
SNIP1-203ENST00000493916 SRCIN1Q9C0H9 1055 aa28.71■■■□□ 2.19
SNIP1-203ENST00000493916 PODXL2Q9NZ53 605 aa28.71■■■□□ 2.19
SNIP1-203ENST00000493916 HSPA6P17066 643 aa28.7■■■□□ 2.18
SNIP1-203ENST00000493916 SLC4A10Q6U841 1118 aa28.7■■■□□ 2.18
SNIP1-203ENST00000493916 GRM8O00222 908 aa28.69■■■□□ 2.18
SNIP1-203ENST00000493916 CSF1RP07333 972 aa28.69■■■□□ 2.18
SNIP1-203ENST00000493916 BCL2L13Q9BXK5 485 aa28.69■■■□□ 2.18
SNIP1-203ENST00000493916 ZNRF3Q9ULT6 936 aa28.69■■■□□ 2.18
SNIP1-203ENST00000493916 SMC1BQ8NDV3 1235 aa28.68■■■□□ 2.18
SNIP1-203ENST00000493916 SMC4Q9NTJ3 1288 aa28.68■■■□□ 2.18
SNIP1-203ENST00000493916 POLLQ9UGP5 575 aa28.68■■■□□ 2.18
SNIP1-203ENST00000493916 TBC1D16Q8TBP0 767 aa28.67■■■□□ 2.18
SNIP1-203ENST00000493916 HNRNPUQ00839 825 aaKnown RBP eCLIP28.66■■■□□ 2.18
SNIP1-203ENST00000493916 WASHC4Q2M389 1173 aa28.66■■■□□ 2.18
SNIP1-203ENST00000493916 FAM161AQ3B820 660 aa28.66■■■□□ 2.18
SNIP1-203ENST00000493916 EYA3Q99504 573 aa28.66■■■□□ 2.18
SNIP1-203ENST00000493916 BSDC1Q9NW68 430 aaPredicted RBP28.66■■■□□ 2.18
SNIP1-203ENST00000493916 C6orf229H3BNL8 230 aa28.65■■■□□ 2.18
SNIP1-203ENST00000493916 ITGA6P23229 1130 aa28.65■■■□□ 2.18
SNIP1-203ENST00000493916 BRPF1P55201 1214 aaPredicted RBP28.65■■■□□ 2.18
SNIP1-203ENST00000493916 FOXO4P98177 505 aa28.65■■■□□ 2.18
SNIP1-203ENST00000493916 TAF1DQ9H5J8 278 aaPredicted RBP28.65■■■□□ 2.18
SNIP1-203ENST00000493916 C9orf78Q9NZ63 289 aaPredicted RBP28.65■■■□□ 2.18
SNIP1-203ENST00000493916 ANKIB1Q9P2G1 1089 aa28.65■■■□□ 2.18
SNIP1-203ENST00000493916 HACL1Q9UJ83 578 aa28.65■■■□□ 2.18
SNIP1-203ENST00000493916 SPEF2Q9C093 1822 aa28.64■■■□□ 2.18
SNIP1-203ENST00000493916 GGA1Q9UJY5 639 aa28.64■■■□□ 2.18
SNIP1-203ENST00000493916 GJA3Q9Y6H8 435 aa28.64■■■□□ 2.18
SNIP1-203ENST00000493916 XDHP47989 1333 aa28.64■■■□□ 2.17
SNIP1-203ENST00000493916 CEP350Q5VT06 3117 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms