RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 KIF7Q2M1P5 1343 aa9.06□□□□□ -0.96
TRA2B-216ENST00000493864 TECPR2O15040 1411 aa9.06□□□□□ -0.96
TRA2B-216ENST00000493864 GNRH1P01148 92 aa9.06□□□□□ -0.96
TRA2B-216ENST00000493864 PTGIRP43119 386 aa9.06□□□□□ -0.96
TRA2B-216ENST00000493864 TMF1P82094 1093 aa9.06□□□□□ -0.96
TRA2B-216ENST00000493864 DDX10Q13206 875 aaKnown RBP9.06□□□□□ -0.96
TRA2B-216ENST00000493864 CCDC7Q96M83 1385 aa9.06□□□□□ -0.96
TRA2B-216ENST00000493864 DISP3Q9P2K9 1392 aa9.06□□□□□ -0.96
TRA2B-216ENST00000493864 FAM135BQ49AJ0 1406 aa9.05□□□□□ -0.96
TRA2B-216ENST00000493864 DLC1Q96QB1 1528 aa9.05□□□□□ -0.96
TRA2B-216ENST00000493864 ARHGEF28Q8N1W1 1705 aaKnown RBP9.05□□□□□ -0.96
TRA2B-216ENST00000493864 ST8SIA5O15466 376 aa9.05□□□□□ -0.96
TRA2B-216ENST00000493864 UPP2O95045 317 aa9.05□□□□□ -0.96
TRA2B-216ENST00000493864 BMP1P13497 986 aa9.05□□□□□ -0.96
TRA2B-216ENST00000493864 SMCPP49901 116 aaPredicted RBP9.05□□□□□ -0.96
TRA2B-216ENST00000493864 GDF10P55107 478 aa9.05□□□□□ -0.96
TRA2B-216ENST00000493864 DPYDQ12882 1025 aa9.05□□□□□ -0.96
TRA2B-216ENST00000493864 ANKMY2Q8IV38 441 aa9.05□□□□□ -0.96
TRA2B-216ENST00000493864 SIX5Q8N196 739 aa9.05□□□□□ -0.96
TRA2B-216ENST00000493864 LINC00528Q8N1L1 170 aa9.05□□□□□ -0.96
TRA2B-216ENST00000493864 TSEN34Q9BSV6 310 aaKnown RBP9.05□□□□□ -0.96
TRA2B-216ENST00000493864 ETNK1Q9HBU6 452 aa9.05□□□□□ -0.96
TRA2B-216ENST00000493864 SBNO2Q9Y2G9 1366 aa9.04□□□□□ -0.96
TRA2B-216ENST00000493864 A0A1W2PRU2 124 aa9.04□□□□□ -0.96
TRA2B-216ENST00000493864 MEN1O00255 615 aa9.04□□□□□ -0.96
TRA2B-216ENST00000493864 SCNN1DP51172 638 aa9.04□□□□□ -0.96
TRA2B-216ENST00000493864 PIP4K2BP78356 416 aa9.04□□□□□ -0.96
TRA2B-216ENST00000493864 C6orf118Q5T5N4 469 aa9.04□□□□□ -0.96
TRA2B-216ENST00000493864 MRPL14Q6P1L8 145 aaKnown RBP9.04□□□□□ -0.96
TRA2B-216ENST00000493864 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.04□□□□□ -0.96
TRA2B-216ENST00000493864 FAM200AQ8TCP9 573 aa9.04□□□□□ -0.96
TRA2B-216ENST00000493864 CDK19Q9BWU1 502 aa9.04□□□□□ -0.96
TRA2B-216ENST00000493864 ZMIZ1Q9ULJ6 1067 aa9.04□□□□□ -0.96
TRA2B-216ENST00000493864 EVC2Q86UK5 1308 aa9.04□□□□□ -0.96
TRA2B-216ENST00000493864 XRN1Q8IZH2 1706 aaKnown RBP9.03□□□□□ -0.96
TRA2B-216ENST00000493864 SFI1A8K8P3 1242 aa9.03□□□□□ -0.96
TRA2B-216ENST00000493864 TMEM229AB2RXF0 380 aa9.03□□□□□ -0.96
TRA2B-216ENST00000493864 CSB-PGBD3P0DP91 1061 aa9.03□□□□□ -0.96
TRA2B-216ENST00000493864 BMP2P12643 396 aa9.03□□□□□ -0.96
TRA2B-216ENST00000493864 ELOAQ14241 798 aaKnown RBP9.03□□□□□ -0.96
TRA2B-216ENST00000493864 ESCO1Q5FWF5 840 aa9.03□□□□□ -0.96
TRA2B-216ENST00000493864 Q6ZNB5 142 aa9.03□□□□□ -0.96
TRA2B-216ENST00000493864 CRIPAKQ8N1N5 446 aa9.03□□□□□ -0.96
TRA2B-216ENST00000493864 STK32AQ8WU08 396 aa9.03□□□□□ -0.96
TRA2B-216ENST00000493864 ARXQ96QS3 562 aa9.03□□□□□ -0.96
TRA2B-216ENST00000493864 AAASQ9NRG9 546 aa9.03□□□□□ -0.96
TRA2B-216ENST00000493864 SERTAD1Q9UHV2 236 aa9.03□□□□□ -0.96
TRA2B-216ENST00000493864 QRICH2Q9H0J4 1663 aa9.03□□□□□ -0.96
TRA2B-216ENST00000493864 KNDC1Q76NI1 1749 aa9.02□□□□□ -0.96
TRA2B-216ENST00000493864 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.02□□□□□ -0.96
TRA2B-216ENST00000493864 TMEM94Q12767 1356 aa9.02□□□□□ -0.97
TRA2B-216ENST00000493864 WASLO00401 505 aaPredicted RBP9.02□□□□□ -0.97
TRA2B-216ENST00000493864 DKK1O94907 266 aa9.02□□□□□ -0.97
TRA2B-216ENST00000493864 IL2RAP01589 272 aa9.02□□□□□ -0.97
TRA2B-216ENST00000493864 INHAP05111 366 aa9.02□□□□□ -0.97
TRA2B-216ENST00000493864 SEC13P55735 322 aa9.02□□□□□ -0.97
TRA2B-216ENST00000493864 RETREG2Q8NC44 543 aa9.02□□□□□ -0.97
TRA2B-216ENST00000493864 PURBQ96QR8 312 aaKnown RBP9.02□□□□□ -0.97
TRA2B-216ENST00000493864 ZNF358Q9NW07 568 aa9.02□□□□□ -0.97
TRA2B-216ENST00000493864 PTCH1Q13635 1447 aa9.02□□□□□ -0.97
TRA2B-216ENST00000493864 NKTRP30414 1462 aaKnown RBP9.02□□□□□ -0.97
TRA2B-216ENST00000493864 CLN3Q13286 438 aa9.01□□□□□ -0.97
TRA2B-216ENST00000493864 SCARF1Q14162 830 aa9.01□□□□□ -0.97
TRA2B-216ENST00000493864 TRIM46Q7Z4K8 759 aa9.01□□□□□ -0.97
TRA2B-216ENST00000493864 NALCNQ8IZF0 1738 aa9.01□□□□□ -0.97
TRA2B-216ENST00000493864 CNKSR1Q969H4 720 aa9.01□□□□□ -0.97
TRA2B-216ENST00000493864 NLRP3Q96P20 1036 aa9.01□□□□□ -0.97
TRA2B-216ENST00000493864 PUS7Q96PZ0 661 aaKnown RBP9.01□□□□□ -0.97
TRA2B-216ENST00000493864 INSM2Q96T92 566 aaPredicted RBP9.01□□□□□ -0.97
TRA2B-216ENST00000493864 ROBO1Q9Y6N7 1651 aa9□□□□□ -0.97
TRA2B-216ENST00000493864 TULP4Q9NRJ4 1543 aa9□□□□□ -0.97
TRA2B-216ENST00000493864 TMEM164Q5U3C3 297 aa9□□□□□ -0.97
TRA2B-216ENST00000493864 DIEXFQ68CQ4 756 aaKnown RBP9□□□□□ -0.97
TRA2B-216ENST00000493864 ESYT1Q9BSJ8 1104 aa9□□□□□ -0.97
TRA2B-216ENST00000493864 SLC12A5Q9H2X9 1139 aa9□□□□□ -0.97
TRA2B-216ENST00000493864 POLMQ9NP87 494 aaPredicted RBP9□□□□□ -0.97
TRA2B-216ENST00000493864 DACH1Q9UI36 760 aa9□□□□□ -0.97
TRA2B-216ENST00000493864 BACH1O14867 736 aa8.99□□□□□ -0.97
TRA2B-216ENST00000493864 SPINT1O43278 529 aa8.99□□□□□ -0.97
TRA2B-216ENST00000493864 TOM1O60784 492 aa8.99□□□□□ -0.97
TRA2B-216ENST00000493864 TSEN2Q8NCE0 465 aaKnown RBP8.99□□□□□ -0.97
TRA2B-216ENST00000493864 TMC1Q8TDI8 760 aa8.99□□□□□ -0.97
TRA2B-216ENST00000493864 NUDT16Q96DE0 195 aaKnown RBP8.99□□□□□ -0.97
TRA2B-216ENST00000493864 XAGE2Q96GT9 111 aa8.99□□□□□ -0.97
TRA2B-216ENST00000493864 ATP13A2Q9NQ11 1180 aa8.99□□□□□ -0.97
TRA2B-216ENST00000493864 CARNS1A5YM72 827 aa8.98□□□□□ -0.97
TRA2B-216ENST00000493864 LGR5O75473 907 aa8.98□□□□□ -0.97
TRA2B-216ENST00000493864 HSPA1LP34931 641 aa8.98□□□□□ -0.97
TRA2B-216ENST00000493864 CTSOP43234 321 aaPredicted RBP8.98□□□□□ -0.97
TRA2B-216ENST00000493864 TNS4Q8IZW8 715 aa8.98□□□□□ -0.97
TRA2B-216ENST00000493864 ZFP42Q96MM3 310 aa8.98□□□□□ -0.97
TRA2B-216ENST00000493864 HINFPQ9BQA5 517 aa8.98□□□□□ -0.97
TRA2B-216ENST00000493864 PANK3Q9H999 370 aa8.98□□□□□ -0.97
TRA2B-216ENST00000493864 PRR36Q9H6K5 1346 aa8.98□□□□□ -0.97
TRA2B-216ENST00000493864 CENPCQ03188 943 aa8.97□□□□□ -0.97
TRA2B-216ENST00000493864 TLR1Q15399 786 aa8.97□□□□□ -0.97
TRA2B-216ENST00000493864 C19orf44Q9H6X5 657 aa8.97□□□□□ -0.97
TRA2B-216ENST00000493864 CABP1Q9NZU7 370 aa8.97□□□□□ -0.97
TRA2B-216ENST00000493864 PHLPP1O60346 1717 aa8.97□□□□□ -0.97
TRA2B-216ENST00000493864 SMTNP53814 917 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms