RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 PALLDQ8WX93 1383 aa12.99□□□□□ -0.33
PHACTR4-204ENST00000493669 RNF20Q5VTR2 975 aa12.99□□□□□ -0.33
PHACTR4-204ENST00000493669 NLRP10Q86W26 655 aa12.99□□□□□ -0.33
PHACTR4-204ENST00000493669 RASEFQ8IZ41 740 aa12.99□□□□□ -0.33
PHACTR4-204ENST00000493669 ZGPATQ8N5A5 531 aaKnown RBP12.99□□□□□ -0.33
PHACTR4-204ENST00000493669 FAM227BQ96M60 508 aa12.99□□□□□ -0.33
PHACTR4-204ENST00000493669 ZBTB1Q9Y2K1 713 aa12.99□□□□□ -0.33
PHACTR4-204ENST00000493669 HMG20BQ9P0W2 317 aa12.98□□□□□ -0.33
PHACTR4-204ENST00000493669 AKAP2Q9Y2D5 859 aa12.98□□□□□ -0.33
PHACTR4-204ENST00000493669 RBM8AQ9Y5S9 174 aaKnown RBP12.98□□□□□ -0.33
PHACTR4-204ENST00000493669 A0A0D9SFI3 127 aa12.98□□□□□ -0.33
PHACTR4-204ENST00000493669 BAG4O95429 457 aaKnown RBP12.98□□□□□ -0.33
PHACTR4-204ENST00000493669 CEP126Q9P2H0 1117 aa12.98□□□□□ -0.33
PHACTR4-204ENST00000493669 VPS53Q5VIR6 699 aa12.97□□□□□ -0.33
PHACTR4-204ENST00000493669 AK7Q96M32 723 aa12.97□□□□□ -0.33
PHACTR4-204ENST00000493669 ZSWIM6Q9HCJ5 1215 aa12.97□□□□□ -0.33
PHACTR4-204ENST00000493669 ZNF831Q5JPB2 1677 aa12.97□□□□□ -0.33
PHACTR4-204ENST00000493669 PSMA5P28066 241 aa12.97□□□□□ -0.33
PHACTR4-204ENST00000493669 PRPF40BQ6NWY9 871 aaKnown RBP12.97□□□□□ -0.33
PHACTR4-204ENST00000493669 KBTBD3Q8NAB2 608 aa12.97□□□□□ -0.33
PHACTR4-204ENST00000493669 NUP98P52948 1817 aa12.97□□□□□ -0.33
PHACTR4-204ENST00000493669 IFIT5Q13325 482 aaKnown RBP12.97□□□□□ -0.33
PHACTR4-204ENST00000493669 HLFQ16534 295 aa12.97□□□□□ -0.33
PHACTR4-204ENST00000493669 TSGA10IPQ3SY00 556 aa12.97□□□□□ -0.33
PHACTR4-204ENST00000493669 CREB3L3Q68CJ9 461 aa12.97□□□□□ -0.33
PHACTR4-204ENST00000493669 DZIP3Q86Y13 1208 aaKnown RBP12.97□□□□□ -0.33
PHACTR4-204ENST00000493669 MARCH10Q8NA82 808 aaPredicted RBP12.97□□□□□ -0.33
PHACTR4-204ENST00000493669 LIMCH1Q9UPQ0 1083 aa12.97□□□□□ -0.33
PHACTR4-204ENST00000493669 ABCC12Q96J65 1359 aa12.96□□□□□ -0.33
PHACTR4-204ENST00000493669 RPAP1Q9BWH6 1393 aaPredicted RBP12.96□□□□□ -0.33
PHACTR4-204ENST00000493669 SH3TC1Q8TE82 1336 aa12.96□□□□□ -0.33
PHACTR4-204ENST00000493669 KCNJ4P48050 445 aa12.96□□□□□ -0.33
PHACTR4-204ENST00000493669 EIF5P55010 431 aaKnown RBP12.96□□□□□ -0.33
PHACTR4-204ENST00000493669 LRRC24Q50LG9 513 aa12.96□□□□□ -0.33
PHACTR4-204ENST00000493669 SMARCC1Q92922 1105 aaPredicted RBP12.96□□□□□ -0.33
PHACTR4-204ENST00000493669 FAM89AQ96GI7 184 aa12.96□□□□□ -0.33
PHACTR4-204ENST00000493669 ISY1Q9ULR0 285 aaKnown RBP12.96□□□□□ -0.33
PHACTR4-204ENST00000493669 CYP46A1Q9Y6A2 500 aa12.96□□□□□ -0.33
PHACTR4-204ENST00000493669 MYH3P11055 1940 aa12.96□□□□□ -0.33
PHACTR4-204ENST00000493669 CASTP20810 708 aaKnown RBP12.96□□□□□ -0.34
PHACTR4-204ENST00000493669 USPL1Q5W0Q7 1092 aa12.96□□□□□ -0.34
PHACTR4-204ENST00000493669 ZSCAN31Q96LW9 406 aaPredicted RBP12.96□□□□□ -0.34
PHACTR4-204ENST00000493669 NEUROD6Q96NK8 337 aa12.96□□□□□ -0.34
PHACTR4-204ENST00000493669 CCDC87Q9NVE4 849 aa12.96□□□□□ -0.34
PHACTR4-204ENST00000493669 A0A1B0GUL7 405 aa12.95□□□□□ -0.34
PHACTR4-204ENST00000493669 AK2P54819 239 aa12.95□□□□□ -0.34
PHACTR4-204ENST00000493669 L1TD1Q5T7N2 865 aaKnown RBP12.95□□□□□ -0.34
PHACTR4-204ENST00000493669 ZNF34Q8IZ26 560 aa12.95□□□□□ -0.34
PHACTR4-204ENST00000493669 ZNF594Q96JF6 807 aaPredicted RBP12.95□□□□□ -0.34
PHACTR4-204ENST00000493669 JAKMIP1Q96N16 626 aaKnown RBP12.95□□□□□ -0.34
PHACTR4-204ENST00000493669 DNAJC2Q99543 621 aaKnown RBP12.95□□□□□ -0.34
PHACTR4-204ENST00000493669 NUTM2BA6NNL0 878 aaPredicted RBP12.95□□□□□ -0.34
PHACTR4-204ENST00000493669 NUTM2EB1AL46 878 aaPredicted RBP12.95□□□□□ -0.34
PHACTR4-204ENST00000493669 SLC27A2O14975 620 aa12.95□□□□□ -0.34
PHACTR4-204ENST00000493669 CTSWP56202 376 aa12.95□□□□□ -0.34
PHACTR4-204ENST00000493669 TAF7LQ5H9L4 462 aa12.95□□□□□ -0.34
PHACTR4-204ENST00000493669 NUTM2AQ8IVF1 878 aaPredicted RBP12.95□□□□□ -0.34
PHACTR4-204ENST00000493669 ALDH8A1Q9H2A2 487 aaPredicted RBP12.95□□□□□ -0.34
PHACTR4-204ENST00000493669 SH2B1Q9NRF2 756 aaPredicted RBP12.95□□□□□ -0.34
PHACTR4-204ENST00000493669 PAG1Q9NWQ8 432 aa12.95□□□□□ -0.34
PHACTR4-204ENST00000493669 KAT6BQ8WYB5 2073 aa12.95□□□□□ -0.34
PHACTR4-204ENST00000493669 TAF5LO75529 589 aa12.94□□□□□ -0.34
PHACTR4-204ENST00000493669 BRD1O95696 1058 aa12.94□□□□□ -0.34
PHACTR4-204ENST00000493669 KRT32Q14532 448 aa12.94□□□□□ -0.34
PHACTR4-204ENST00000493669 LRRFIP1Q32MZ4 808 aaKnown RBP12.94□□□□□ -0.34
PHACTR4-204ENST00000493669 MCMDC2Q4G0Z9 681 aa12.94□□□□□ -0.34
PHACTR4-204ENST00000493669 RUFY3Q7L099 469 aa12.94□□□□□ -0.34
PHACTR4-204ENST00000493669 HELLSQ9NRZ9 838 aa12.94□□□□□ -0.34
PHACTR4-204ENST00000493669 PDRG1Q9NUG6 133 aa12.94□□□□□ -0.34
PHACTR4-204ENST00000493669 LOC102724428A0A0B4J2F2 783 aa12.94□□□□□ -0.34
PHACTR4-204ENST00000493669 PDE8AO60658 829 aa12.94□□□□□ -0.34
PHACTR4-204ENST00000493669 SIK1P57059 783 aa12.94□□□□□ -0.34
PHACTR4-204ENST00000493669 TTLL11Q8NHH1 800 aa12.94□□□□□ -0.34
PHACTR4-204ENST00000493669 ARXQ96QS3 562 aa12.94□□□□□ -0.34
PHACTR4-204ENST00000493669 ZDHHC9Q9Y397 364 aa12.94□□□□□ -0.34
PHACTR4-204ENST00000493669 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.94□□□□□ -0.34
PHACTR4-204ENST00000493669 U3KPZ7 1027 aaPredicted RBP12.94□□□□□ -0.34
PHACTR4-204ENST00000493669 TIMM10P62072 90 aa12.94□□□□□ -0.34
PHACTR4-204ENST00000493669 INTS5Q6P9B9 1019 aaKnown RBP12.94□□□□□ -0.34
PHACTR4-204ENST00000493669 EDC3Q96F86 508 aaKnown RBP12.94□□□□□ -0.34
PHACTR4-204ENST00000493669 PUS3Q9BZE2 481 aaKnown RBP12.94□□□□□ -0.34
PHACTR4-204ENST00000493669 LRP5O75197 1615 aa12.94□□□□□ -0.34
PHACTR4-204ENST00000493669 ANKRD18BA2A2Z9 1011 aa12.93□□□□□ -0.34
PHACTR4-204ENST00000493669 IRS4O14654 1257 aaPredicted RBP12.93□□□□□ -0.34
PHACTR4-204ENST00000493669 IFIT1P09914 478 aaKnown RBP12.93□□□□□ -0.34
PHACTR4-204ENST00000493669 GPTP24298 496 aa12.93□□□□□ -0.34
PHACTR4-204ENST00000493669 VPS72Q15906 364 aa12.93□□□□□ -0.34
PHACTR4-204ENST00000493669 CCDC158Q5M9N0 1113 aa12.93□□□□□ -0.34
PHACTR4-204ENST00000493669 ZNF589Q86UQ0 364 aaPredicted RBP12.93□□□□□ -0.34
PHACTR4-204ENST00000493669 TRMT112Q9UI30 125 aaKnown RBP12.93□□□□□ -0.34
PHACTR4-204ENST00000493669 RIC1Q4ADV7 1423 aa12.93□□□□□ -0.34
PHACTR4-204ENST00000493669 HSP90B1P14625 803 aaKnown RBP12.93□□□□□ -0.34
PHACTR4-204ENST00000493669 ATP6V1AP38606 617 aa12.93□□□□□ -0.34
PHACTR4-204ENST00000493669 PIP4K2BP78356 416 aa12.93□□□□□ -0.34
PHACTR4-204ENST00000493669 PKP1Q13835 747 aa12.93□□□□□ -0.34
PHACTR4-204ENST00000493669 ANKRD1Q15327 319 aa12.93□□□□□ -0.34
PHACTR4-204ENST00000493669 CCDC9Q9Y3X0 531 aaKnown RBP12.93□□□□□ -0.34
PHACTR4-204ENST00000493669 CRKLP46109 303 aaKnown RBP12.92□□□□□ -0.34
PHACTR4-204ENST00000493669 KLHL40Q2TBA0 621 aa12.92□□□□□ -0.34
PHACTR4-204ENST00000493669 ADCK5Q3MIX3 580 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms