RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 TRMT112Q9UI30 125 aaKnown RBP16.17■□□□□ 0.18
SAMM50-205ENST00000493621 TLL2Q9Y6L7 1015 aa16.17■□□□□ 0.18
SAMM50-205ENST00000493621 RAD17O75943 681 aa16.16■□□□□ 0.18
SAMM50-205ENST00000493621 LMOD3Q0VAK6 560 aa16.16■□□□□ 0.18
SAMM50-205ENST00000493621 TCIRG1Q13488 830 aa16.16■□□□□ 0.18
SAMM50-205ENST00000493621 CIAPIN1Q6FI81 312 aa16.16■□□□□ 0.18
SAMM50-205ENST00000493621 DDX46Q7L014 1031 aaKnown RBP16.16■□□□□ 0.18
SAMM50-205ENST00000493621 ZNF428Q96B54 188 aa16.16■□□□□ 0.18
SAMM50-205ENST00000493621 BEGAINQ9BUH8 593 aa16.16■□□□□ 0.18
SAMM50-205ENST00000493621 DDX60Q8IY21 1712 aaKnown RBP16.16■□□□□ 0.18
SAMM50-205ENST00000493621 KIAA2012Q0VF49 1180 aa16.15■□□□□ 0.18
SAMM50-205ENST00000493621 ABHD8Q96I13 439 aa16.15■□□□□ 0.18
SAMM50-205ENST00000493621 BCL2L13Q9BXK5 485 aa16.15■□□□□ 0.18
SAMM50-205ENST00000493621 GLIS2Q9BZE0 524 aaPredicted RBP16.15■□□□□ 0.18
SAMM50-205ENST00000493621 SH3TC1Q8TE82 1336 aa16.15■□□□□ 0.18
SAMM50-205ENST00000493621 LRRC37AA6NMS7 1700 aa16.14■□□□□ 0.17
SAMM50-205ENST00000493621 AOC2O75106 756 aa16.14■□□□□ 0.17
SAMM50-205ENST00000493621 CELF2O95319 508 aaKnown RBP16.14■□□□□ 0.17
SAMM50-205ENST00000493621 GRAPQ13588 217 aa16.14■□□□□ 0.17
SAMM50-205ENST00000493621 TNIP1Q15025 636 aa16.14■□□□□ 0.17
SAMM50-205ENST00000493621 NEUROD2Q15784 382 aa16.14■□□□□ 0.17
SAMM50-205ENST00000493621 KRT24Q2M2I5 525 aa16.14■□□□□ 0.17
SAMM50-205ENST00000493621 GRAPLQ8TC17 118 aaPredicted RBP16.14■□□□□ 0.17
SAMM50-205ENST00000493621 DUOX1Q9NRD9 1551 aa16.13■□□□□ 0.17
SAMM50-205ENST00000493621 CCDC146Q8IYE0 955 aa16.13■□□□□ 0.17
SAMM50-205ENST00000493621 ZNF408Q9H9D4 720 aa16.13■□□□□ 0.17
SAMM50-205ENST00000493621 LAS1LQ9Y4W2 734 aaKnown RBP16.13■□□□□ 0.17
SAMM50-205ENST00000493621 CDHR2Q9BYE9 1310 aa16.13■□□□□ 0.17
SAMM50-205ENST00000493621 HIRAP54198 1017 aaPredicted RBP16.12■□□□□ 0.17
SAMM50-205ENST00000493621 RALBP1Q15311 655 aa16.12■□□□□ 0.17
SAMM50-205ENST00000493621 SAPCD2Q86UD0 394 aa16.12■□□□□ 0.17
SAMM50-205ENST00000493621 CHPF2Q9P2E5 772 aa16.12■□□□□ 0.17
SAMM50-205ENST00000493621 PGAP2Q9UHJ9 254 aa16.12■□□□□ 0.17
SAMM50-205ENST00000493621 TSKSQ9UJT2 592 aa16.12■□□□□ 0.17
SAMM50-205ENST00000493621 SHTN1A0MZ66 631 aa16.11■□□□□ 0.17
SAMM50-205ENST00000493621 YDJCA8MPS7 323 aa16.11■□□□□ 0.17
SAMM50-205ENST00000493621 CHL1O00533 1208 aa16.11■□□□□ 0.17
SAMM50-205ENST00000493621 MAP2K2P36507 400 aa16.11■□□□□ 0.17
SAMM50-205ENST00000493621 TRPM4Q8TD43 1214 aa16.11■□□□□ 0.17
SAMM50-205ENST00000493621 ZC3H15Q8WU90 426 aaKnown RBP16.11■□□□□ 0.17
SAMM50-205ENST00000493621 CNOT7Q9UIV1 285 aaKnown RBP16.11■□□□□ 0.17
SAMM50-205ENST00000493621 POLR2AP24928 1970 aaKnown RBP16.11■□□□□ 0.17
SAMM50-205ENST00000493621 HDGFL1Q5TGJ6 251 aa16.1■□□□□ 0.17
SAMM50-205ENST00000493621 TMC4Q7Z404 712 aa16.1■□□□□ 0.17
SAMM50-205ENST00000493621 PLBD2Q8NHP8 589 aa16.1■□□□□ 0.17
SAMM50-205ENST00000493621 CASP8AP2Q9UKL3 1982 aa16.09■□□□□ 0.17
SAMM50-205ENST00000493621 H7C1D1 291 aa16.09■□□□□ 0.17
SAMM50-205ENST00000493621 CDC37L1Q7L3B6 337 aa16.09■□□□□ 0.17
SAMM50-205ENST00000493621 MICALL2Q8IY33 904 aa16.09■□□□□ 0.17
SAMM50-205ENST00000493621 FAM89AQ96GI7 184 aa16.09■□□□□ 0.17
SAMM50-205ENST00000493621 HHIPL1Q96JK4 782 aa16.09■□□□□ 0.17
SAMM50-205ENST00000493621 TRIM35Q9UPQ4 493 aa16.09■□□□□ 0.17
SAMM50-205ENST00000493621 ZBTB12Q9Y330 459 aaPredicted RBP16.09■□□□□ 0.17
SAMM50-205ENST00000493621 COL4A1P02462 1669 aa16.08■□□□□ 0.17
SAMM50-205ENST00000493621 ATP5J2-PTCD1G3V325 749 aa16.08■□□□□ 0.16
SAMM50-205ENST00000493621 WASHC4Q2M389 1173 aa16.08■□□□□ 0.16
SAMM50-205ENST00000493621 ANKRD13DQ6ZTN6 518 aa16.08■□□□□ 0.16
SAMM50-205ENST00000493621 CELF1Q92879 486 aaKnown RBP16.08■□□□□ 0.16
SAMM50-205ENST00000493621 ISCA1Q9BUE6 129 aa16.08■□□□□ 0.16
SAMM50-205ENST00000493621 DBNDD1Q9H9R9 158 aa16.08■□□□□ 0.16
SAMM50-205ENST00000493621 NSFL1CQ9UNZ2 370 aaKnown RBP16.08■□□□□ 0.16
SAMM50-205ENST00000493621 CCDC85CA6NKD9 419 aa16.07■□□□□ 0.16
SAMM50-205ENST00000493621 C6orf229H3BNL8 230 aa16.07■□□□□ 0.16
SAMM50-205ENST00000493621 PSMD14O00487 310 aa16.07■□□□□ 0.16
SAMM50-205ENST00000493621 RIMBP2O15034 1052 aa16.07■□□□□ 0.16
SAMM50-205ENST00000493621 SF3B3Q15393 1217 aaKnown RBP16.07■□□□□ 0.16
SAMM50-205ENST00000493621 FAM161AQ3B820 660 aa16.07■□□□□ 0.16
SAMM50-205ENST00000493621 RTL5Q5HYW3 569 aaPredicted RBP16.07■□□□□ 0.16
SAMM50-205ENST00000493621 USP48Q86UV5 1035 aa16.07■□□□□ 0.16
SAMM50-205ENST00000493621 RUNDC1Q96C34 613 aa16.07■□□□□ 0.16
SAMM50-205ENST00000493621 DBF4Q9UBU7 674 aaPredicted RBP16.07■□□□□ 0.16
SAMM50-205ENST00000493621 MYBBP1AQ9BQG0 1328 aaKnown RBP16.06■□□□□ 0.16
SAMM50-205ENST00000493621 CA12O43570 354 aa16.06■□□□□ 0.16
SAMM50-205ENST00000493621 BRPF1P55201 1214 aaPredicted RBP16.06■□□□□ 0.16
SAMM50-205ENST00000493621 GPSM2P81274 684 aa16.06■□□□□ 0.16
SAMM50-205ENST00000493621 DLK2Q6UY11 383 aa16.06■□□□□ 0.16
SAMM50-205ENST00000493621 SAMD7Q7Z3H4 446 aa16.06■□□□□ 0.16
SAMM50-205ENST00000493621 DPF2Q92785 391 aa16.06■□□□□ 0.16
SAMM50-205ENST00000493621 POLLQ9UGP5 575 aa16.06■□□□□ 0.16
SAMM50-205ENST00000493621 HOXB7P09629 217 aa16.05■□□□□ 0.16
SAMM50-205ENST00000493621 WDR43Q15061 677 aaKnown RBP eCLIP16.05■□□□□ 0.16
SAMM50-205ENST00000493621 DOK7Q18PE1 504 aa16.05■□□□□ 0.16
SAMM50-205ENST00000493621 TBC1D10BQ4KMP7 808 aaPredicted RBP16.05■□□□□ 0.16
SAMM50-205ENST00000493621 HYPKQ9NX55 129 aa16.05■□□□□ 0.16
SAMM50-205ENST00000493621 SCN9AQ15858 1988 aa16.04■□□□□ 0.16
SAMM50-205ENST00000493621 IRS4O14654 1257 aaPredicted RBP16.04■□□□□ 0.16
SAMM50-205ENST00000493621 ECE2O60344 883 aa16.04■□□□□ 0.16
SAMM50-205ENST00000493621 HUNKP57058 714 aa16.04■□□□□ 0.16
SAMM50-205ENST00000493621 RBM26Q5T8P6 1007 aaKnown RBP16.04■□□□□ 0.16
SAMM50-205ENST00000493621 DUSP27Q5VZP5 1158 aa16.04■□□□□ 0.16
SAMM50-205ENST00000493621 KCNQ5Q9NR82 932 aa16.04■□□□□ 0.16
SAMM50-205ENST00000493621 EGFRP00533 1210 aa16.03■□□□□ 0.16
SAMM50-205ENST00000493621 DDX10Q13206 875 aaKnown RBP16.03■□□□□ 0.16
SAMM50-205ENST00000493621 NOGQ13253 232 aa16.03■□□□□ 0.16
SAMM50-205ENST00000493621 KRT26Q7Z3Y9 468 aa16.03■□□□□ 0.16
SAMM50-205ENST00000493621 ZIC5Q96T25 663 aa16.03■□□□□ 0.16
SAMM50-205ENST00000493621 EYA3Q99504 573 aa16.03■□□□□ 0.16
SAMM50-205ENST00000493621 RTL9Q8NET4 1388 aa16.02■□□□□ 0.16
SAMM50-205ENST00000493621 RPS12P25398 132 aaKnown RBP16.02■□□□□ 0.16
SAMM50-205ENST00000493621 RPS8P62241 208 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms