RNA–Protein interactions for RNA: ENST00000493615.5

NECTIN3-211, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NECTIN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-211ENST00000493615 HSP90AB4PQ58FF6 505 aa23.32■■□□□ 1.32
NECTIN3-211ENST00000493615 SETDB2Q96T68 719 aa23.32■■□□□ 1.32
NECTIN3-211ENST00000493615 PDE8AO60658 829 aa23.32■■□□□ 1.32
NECTIN3-211ENST00000493615 GYS1P13807 737 aa23.32■■□□□ 1.32
NECTIN3-211ENST00000493615 CTSWP56202 376 aa23.32■■□□□ 1.32
NECTIN3-211ENST00000493615 OS9Q13438 667 aaPredicted RBP23.32■■□□□ 1.32
NECTIN3-211ENST00000493615 FAM161AQ3B820 660 aa23.32■■□□□ 1.32
NECTIN3-211ENST00000493615 PLEKHM2Q8IWE5 1019 aa23.32■■□□□ 1.32
NECTIN3-211ENST00000493615 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.32■■□□□ 1.32
NECTIN3-211ENST00000493615 SASH1O94885 1247 aa23.31■■□□□ 1.32
NECTIN3-211ENST00000493615 KIF1BPQ96EK5 621 aa23.31■■□□□ 1.32
NECTIN3-211ENST00000493615 G3BP1Q13283 466 aaKnown RBP eCLIP23.3■■□□□ 1.32
NECTIN3-211ENST00000493615 ERFEQ4G0M1 354 aa23.3■■□□□ 1.32
NECTIN3-211ENST00000493615 ZNF594Q96JF6 807 aaPredicted RBP23.3■■□□□ 1.32
NECTIN3-211ENST00000493615 NFIXQ14938 502 aa23.3■■□□□ 1.32
NECTIN3-211ENST00000493615 GREM2Q9H772 168 aa23.3■■□□□ 1.32
NECTIN3-211ENST00000493615 CCDC57Q2TAC2 916 aa23.28■■□□□ 1.32
NECTIN3-211ENST00000493615 MSL1Q68DK7 614 aa23.28■■□□□ 1.32
NECTIN3-211ENST00000493615 ZBTB7AO95365 584 aa23.27■■□□□ 1.32
NECTIN3-211ENST00000493615 NBPF5PQ86XG9 351 aaPredicted RBP23.27■■□□□ 1.32
NECTIN3-211ENST00000493615 ERC1Q8IUD2 1116 aa23.27■■□□□ 1.32
NECTIN3-211ENST00000493615 SALL3Q9BXA9 1300 aa23.27■■□□□ 1.32
NECTIN3-211ENST00000493615 TSHZ2Q9NRE2 1034 aa23.26■■□□□ 1.31
NECTIN3-211ENST00000493615 ITGA6P23229 1130 aa23.26■■□□□ 1.31
NECTIN3-211ENST00000493615 IFIT5Q13325 482 aaKnown RBP23.26■■□□□ 1.31
NECTIN3-211ENST00000493615 C3orf67Q6ZVT6 689 aa23.26■■□□□ 1.31
NECTIN3-211ENST00000493615 ATG9AQ7Z3C6 839 aa23.26■■□□□ 1.31
NECTIN3-211ENST00000493615 CCDC24Q8N4L8 307 aa23.26■■□□□ 1.31
NECTIN3-211ENST00000493615 PUS3Q9BZE2 481 aaKnown RBP23.26■■□□□ 1.31
NECTIN3-211ENST00000493615 CASZ1Q86V15 1759 aa23.26■■□□□ 1.31
NECTIN3-211ENST00000493615 ABCC12Q96J65 1359 aa23.25■■□□□ 1.31
NECTIN3-211ENST00000493615 LRRC24Q50LG9 513 aa23.25■■□□□ 1.31
NECTIN3-211ENST00000493615 NYXQ9GZU5 481 aa23.25■■□□□ 1.31
NECTIN3-211ENST00000493615 GTF2E1P29083 439 aaPredicted RBP23.24■■□□□ 1.31
NECTIN3-211ENST00000493615 ATF5Q9Y2D1 282 aaPredicted RBP23.24■■□□□ 1.31
NECTIN3-211ENST00000493615 COL24A1Q17RW2 1714 aa23.24■■□□□ 1.31
NECTIN3-211ENST00000493615 TM4SF1P30408 202 aa23.24■■□□□ 1.31
NECTIN3-211ENST00000493615 PDE1AP54750 535 aa23.24■■□□□ 1.31
NECTIN3-211ENST00000493615 SLC10A5Q5PT55 438 aa23.24■■□□□ 1.31
NECTIN3-211ENST00000493615 TSHZ3Q63HK5 1081 aa23.24■■□□□ 1.31
NECTIN3-211ENST00000493615 TPTE2Q6XPS3 522 aa23.24■■□□□ 1.31
NECTIN3-211ENST00000493615 DDX60Q8IY21 1712 aaKnown RBP23.24■■□□□ 1.31
NECTIN3-211ENST00000493615 CARMIL3Q8ND23 1372 aa23.23■■□□□ 1.31
NECTIN3-211ENST00000493615 EYA2O00167 538 aa23.23■■□□□ 1.31
NECTIN3-211ENST00000493615 TFCP2Q12800 502 aa23.23■■□□□ 1.31
NECTIN3-211ENST00000493615 C8orf34Q49A92 452 aa23.23■■□□□ 1.31
NECTIN3-211ENST00000493615 CLASRPQ8N2M8 674 aaKnown RBP23.22■■□□□ 1.31
NECTIN3-211ENST00000493615 SLC16A10Q8TF71 515 aa23.22■■□□□ 1.31
NECTIN3-211ENST00000493615 ANKRD18BA2A2Z9 1011 aa23.22■■□□□ 1.31
NECTIN3-211ENST00000493615 HSP90B1P14625 803 aaKnown RBP23.22■■□□□ 1.31
NECTIN3-211ENST00000493615 EAF2Q96CJ1 260 aaPredicted RBP23.22■■□□□ 1.31
NECTIN3-211ENST00000493615 SEC31BQ9NQW1 1179 aa23.22■■□□□ 1.31
NECTIN3-211ENST00000493615 MYH3P11055 1940 aa23.21■■□□□ 1.31
NECTIN3-211ENST00000493615 GSPT1P15170 499 aaKnown RBP23.21■■□□□ 1.31
NECTIN3-211ENST00000493615 MX1P20591 662 aa23.21■■□□□ 1.31
NECTIN3-211ENST00000493615 TAF7LQ5H9L4 462 aa23.21■■□□□ 1.31
NECTIN3-211ENST00000493615 BACH2Q9BYV9 841 aa23.21■■□□□ 1.31
NECTIN3-211ENST00000493615 OSBPL3Q9H4L5 887 aa23.21■■□□□ 1.31
NECTIN3-211ENST00000493615 CIAO1O76071 339 aa23.2■■□□□ 1.3
NECTIN3-211ENST00000493615 DDR1Q08345 913 aa23.2■■□□□ 1.3
NECTIN3-211ENST00000493615 CCDC152Q4G0S7 254 aa23.2■■□□□ 1.3
NECTIN3-211ENST00000493615 STAP2Q9UGK3 403 aa23.2■■□□□ 1.3
NECTIN3-211ENST00000493615 IL15P40933 162 aaPredicted RBP23.19■■□□□ 1.3
NECTIN3-211ENST00000493615 BMP2KLQ5H9B9 411 aa23.19■■□□□ 1.3
NECTIN3-211ENST00000493615 TTC22Q5TAA0 569 aa23.19■■□□□ 1.3
NECTIN3-211ENST00000493615 AACSQ86V21 672 aa23.19■■□□□ 1.3
NECTIN3-211ENST00000493615 NLGN1Q8N2Q7 840 aa23.19■■□□□ 1.3
NECTIN3-211ENST00000493615 MTFR1LQ9H019 292 aa23.19■■□□□ 1.3
NECTIN3-211ENST00000493615 SF3B3Q15393 1217 aaKnown RBP23.19■■□□□ 1.3
NECTIN3-211ENST00000493615 SERPINB2P05120 415 aa23.18■■□□□ 1.3
NECTIN3-211ENST00000493615 CCDC8Q9H0W5 538 aaPredicted RBP23.18■■□□□ 1.3
NECTIN3-211ENST00000493615 LAMB2P55268 1798 aa23.18■■□□□ 1.3
NECTIN3-211ENST00000493615 POLRMTO00411 1230 aaKnown RBP23.17■■□□□ 1.3
NECTIN3-211ENST00000493615 PRR5LQ6MZQ0 368 aa23.17■■□□□ 1.3
NECTIN3-211ENST00000493615 LDHAL6AQ6ZMR3 332 aa23.17■■□□□ 1.3
NECTIN3-211ENST00000493615 CNBD1Q8NA66 436 aa23.17■■□□□ 1.3
NECTIN3-211ENST00000493615 TLR7Q9NYK1 1049 aaKnown RBP23.17■■□□□ 1.3
NECTIN3-211ENST00000493615 FBXO3Q9UK99 471 aa23.17■■□□□ 1.3
NECTIN3-211ENST00000493615 RIPOR2Q9Y4F9 1068 aa23.17■■□□□ 1.3
NECTIN3-211ENST00000493615 RTL9Q8NET4 1388 aa23.17■■□□□ 1.3
NECTIN3-211ENST00000493615 TNNI3KQ59H18 835 aa23.17■■□□□ 1.3
NECTIN3-211ENST00000493615 FPGT-TNNI3KV9GXZ4 949 aa23.17■■□□□ 1.3
NECTIN3-211ENST00000493615 NPHP1O15259 732 aa23.16■■□□□ 1.3
NECTIN3-211ENST00000493615 IFIT2P09913 472 aaKnown RBP23.16■■□□□ 1.3
NECTIN3-211ENST00000493615 MMP10P09238 476 aa23.15■■□□□ 1.3
NECTIN3-211ENST00000493615 NLRP3Q96P20 1036 aa23.15■■□□□ 1.3
NECTIN3-211ENST00000493615 PI4K2BQ8TCG2 481 aa23.15■■□□□ 1.3
NECTIN3-211ENST00000493615 COL4A1P02462 1669 aa23.14■■□□□ 1.3
NECTIN3-211ENST00000493615 CNNM1Q9NRU3 951 aa23.14■■□□□ 1.29
NECTIN3-211ENST00000493615 CEP126Q9P2H0 1117 aa23.13■■□□□ 1.29
NECTIN3-211ENST00000493615 TIMM10P62072 90 aa23.13■■□□□ 1.29
NECTIN3-211ENST00000493615 SPON1Q9HCB6 807 aa23.13■■□□□ 1.29
NECTIN3-211ENST00000493615 DBNLQ9UJU6 430 aaKnown RBP23.13■■□□□ 1.29
NECTIN3-211ENST00000493615 SDSP20132 328 aa23.12■■□□□ 1.29
NECTIN3-211ENST00000493615 RIC1Q4ADV7 1423 aa23.12■■□□□ 1.29
NECTIN3-211ENST00000493615 AOX1Q06278 1338 aa23.12■■□□□ 1.29
NECTIN3-211ENST00000493615 GPR108Q9NPR9 543 aa23.11■■□□□ 1.29
NECTIN3-211ENST00000493615 ECHDC1Q9NTX5 307 aa23.11■■□□□ 1.29
NECTIN3-211ENST00000493615 SRCAPQ6ZRS2 3230 aa23.11■■□□□ 1.29
NECTIN3-211ENST00000493615 LRP5O75197 1615 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms