RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 TAF1P21675 1872 aa28.18■■■□□ 2.1
PFDN4-205ENST00000493356 CDHR2Q9BYE9 1310 aa28.18■■■□□ 2.1
PFDN4-205ENST00000493356 AIMP1Q12904 312 aaKnown RBP28.17■■■□□ 2.1
PFDN4-205ENST00000493356 XAGE3Q8WTP9 111 aa28.17■■■□□ 2.1
PFDN4-205ENST00000493356 NECTIN2Q92692 538 aa28.17■■■□□ 2.1
PFDN4-205ENST00000493356 PGAP2Q9UHJ9 254 aa28.17■■■□□ 2.1
PFDN4-205ENST00000493356 CELF2O95319 508 aaKnown RBP28.16■■■□□ 2.1
PFDN4-205ENST00000493356 MAP2K2P36507 400 aa28.16■■■□□ 2.1
PFDN4-205ENST00000493356 SAPCD2Q86UD0 394 aa28.16■■■□□ 2.1
PFDN4-205ENST00000493356 GLIS2Q9BZE0 524 aaPredicted RBP28.16■■■□□ 2.1
PFDN4-205ENST00000493356 AOC2O75106 756 aa28.15■■■□□ 2.1
PFDN4-205ENST00000493356 RAD17O75943 681 aa28.15■■■□□ 2.1
PFDN4-205ENST00000493356 TCIRG1Q13488 830 aa28.15■■■□□ 2.1
PFDN4-205ENST00000493356 DDX46Q7L014 1031 aaKnown RBP28.15■■■□□ 2.1
PFDN4-205ENST00000493356 TRMT112Q9UI30 125 aaKnown RBP28.15■■■□□ 2.1
PFDN4-205ENST00000493356 DUOX1Q9NRD9 1551 aa28.15■■■□□ 2.1
PFDN4-205ENST00000493356 SH3TC1Q8TE82 1336 aa28.15■■■□□ 2.1
PFDN4-205ENST00000493356 TMPOP42166 694 aaKnown RBP28.14■■■□□ 2.1
PFDN4-205ENST00000493356 GRAPQ13588 217 aa28.14■■■□□ 2.1
PFDN4-205ENST00000493356 GRAPLQ8TC17 118 aaPredicted RBP28.14■■■□□ 2.1
PFDN4-205ENST00000493356 BCL2L13Q9BXK5 485 aa28.14■■■□□ 2.1
PFDN4-205ENST00000493356 LRRC37AA6NMS7 1700 aa28.14■■■□□ 2.1
PFDN4-205ENST00000493356 HIRAP54198 1017 aaPredicted RBP28.13■■■□□ 2.09
PFDN4-205ENST00000493356 LMOD3Q0VAK6 560 aa28.13■■■□□ 2.09
PFDN4-205ENST00000493356 TNIP1Q15025 636 aa28.13■■■□□ 2.09
PFDN4-205ENST00000493356 ZC3H15Q8WU90 426 aaKnown RBP28.13■■■□□ 2.09
PFDN4-205ENST00000493356 HHIPL1Q96JK4 782 aa28.12■■■□□ 2.09
PFDN4-205ENST00000493356 TSKSQ9UJT2 592 aa28.12■■■□□ 2.09
PFDN4-205ENST00000493356 YDJCA8MPS7 323 aa28.11■■■□□ 2.09
PFDN4-205ENST00000493356 TRPM4Q8TD43 1214 aa28.11■■■□□ 2.09
PFDN4-205ENST00000493356 DDX60Q8IY21 1712 aaKnown RBP28.11■■■□□ 2.09
PFDN4-205ENST00000493356 TMC4Q7Z404 712 aa28.1■■■□□ 2.09
PFDN4-205ENST00000493356 KRT24Q2M2I5 525 aa28.09■■■□□ 2.09
PFDN4-205ENST00000493356 CNOT7Q9UIV1 285 aaKnown RBP28.09■■■□□ 2.09
PFDN4-205ENST00000493356 SHTN1A0MZ66 631 aa28.08■■■□□ 2.09
PFDN4-205ENST00000493356 FAM161AQ3B820 660 aa28.08■■■□□ 2.09
PFDN4-205ENST00000493356 CDC37L1Q7L3B6 337 aa28.08■■■□□ 2.09
PFDN4-205ENST00000493356 ZNF428Q96B54 188 aa28.08■■■□□ 2.09
PFDN4-205ENST00000493356 ZNF408Q9H9D4 720 aa28.08■■■□□ 2.09
PFDN4-205ENST00000493356 CHPF2Q9P2E5 772 aa28.07■■■□□ 2.08
PFDN4-205ENST00000493356 CHL1O00533 1208 aa28.06■■■□□ 2.08
PFDN4-205ENST00000493356 CA12O43570 354 aa28.06■■■□□ 2.08
PFDN4-205ENST00000493356 CCDC85CA6NKD9 419 aa28.05■■■□□ 2.08
PFDN4-205ENST00000493356 H7C1D1 291 aa28.05■■■□□ 2.08
PFDN4-205ENST00000493356 BRPF1P55201 1214 aaPredicted RBP28.05■■■□□ 2.08
PFDN4-205ENST00000493356 MICALL2Q8IY33 904 aa28.05■■■□□ 2.08
PFDN4-205ENST00000493356 RALBP1Q15311 655 aa28.04■■■□□ 2.08
PFDN4-205ENST00000493356 NEUROD2Q15784 382 aa28.04■■■□□ 2.08
PFDN4-205ENST00000493356 PLBD2Q8NHP8 589 aa28.04■■■□□ 2.08
PFDN4-205ENST00000493356 ZBTB12Q9Y330 459 aaPredicted RBP28.04■■■□□ 2.08
PFDN4-205ENST00000493356 CASP8AP2Q9UKL3 1982 aa28.04■■■□□ 2.08
PFDN4-205ENST00000493356 WASHC4Q2M389 1173 aa28.03■■■□□ 2.08
PFDN4-205ENST00000493356 DPF2Q92785 391 aa28.03■■■□□ 2.08
PFDN4-205ENST00000493356 CELF1Q92879 486 aaKnown RBP28.03■■■□□ 2.08
PFDN4-205ENST00000493356 ISCA1Q9BUE6 129 aa28.03■■■□□ 2.08
PFDN4-205ENST00000493356 SF3B3Q15393 1217 aaKnown RBP28.02■■■□□ 2.08
PFDN4-205ENST00000493356 USP48Q86UV5 1035 aa28.02■■■□□ 2.08
PFDN4-205ENST00000493356 CCDC146Q8IYE0 955 aa28.02■■■□□ 2.08
PFDN4-205ENST00000493356 FAM89AQ96GI7 184 aa28.02■■■□□ 2.08
PFDN4-205ENST00000493356 NSFL1CQ9UNZ2 370 aaKnown RBP28.02■■■□□ 2.08
PFDN4-205ENST00000493356 COL4A1P02462 1669 aa28.02■■■□□ 2.08
PFDN4-205ENST00000493356 PSMD14O00487 310 aa28.01■■■□□ 2.07
PFDN4-205ENST00000493356 HDGFL1Q5TGJ6 251 aa28.01■■■□□ 2.07
PFDN4-205ENST00000493356 ANKRD13DQ6ZTN6 518 aa28.01■■■□□ 2.07
PFDN4-205ENST00000493356 DBNDD1Q9H9R9 158 aa28.01■■■□□ 2.07
PFDN4-205ENST00000493356 LAS1LQ9Y4W2 734 aaKnown RBP28.01■■■□□ 2.07
PFDN4-205ENST00000493356 DLK2Q6UY11 383 aa28■■■□□ 2.07
PFDN4-205ENST00000493356 SAMD7Q7Z3H4 446 aa28■■■□□ 2.07
PFDN4-205ENST00000493356 TRIM35Q9UPQ4 493 aa28■■■□□ 2.07
PFDN4-205ENST00000493356 POLR2AP24928 1970 aaKnown RBP27.99■■■□□ 2.07
PFDN4-205ENST00000493356 ATP5J2-PTCD1G3V325 749 aa27.99■■■□□ 2.07
PFDN4-205ENST00000493356 RGS19P49795 217 aa27.99■■■□□ 2.07
PFDN4-205ENST00000493356 NOGQ13253 232 aa27.99■■■□□ 2.07
PFDN4-205ENST00000493356 POLLQ9UGP5 575 aa27.99■■■□□ 2.07
PFDN4-205ENST00000493356 C6orf229H3BNL8 230 aa27.98■■■□□ 2.07
PFDN4-205ENST00000493356 RIMBP2O15034 1052 aa27.98■■■□□ 2.07
PFDN4-205ENST00000493356 HOXB7P09629 217 aa27.98■■■□□ 2.07
PFDN4-205ENST00000493356 HUNKP57058 714 aa27.98■■■□□ 2.07
PFDN4-205ENST00000493356 GPSM2P81274 684 aa27.98■■■□□ 2.07
PFDN4-205ENST00000493356 ZIC5Q96T25 663 aa27.98■■■□□ 2.07
PFDN4-205ENST00000493356 MCOLN1Q9GZU1 580 aa27.98■■■□□ 2.07
PFDN4-205ENST00000493356 DBF4Q9UBU7 674 aaPredicted RBP27.98■■■□□ 2.07
PFDN4-205ENST00000493356 EGFRP00533 1210 aa27.97■■■□□ 2.07
PFDN4-205ENST00000493356 MLLT1Q03111 559 aaPredicted RBP27.97■■■□□ 2.07
PFDN4-205ENST00000493356 TBC1D10BQ4KMP7 808 aaPredicted RBP27.97■■■□□ 2.07
PFDN4-205ENST00000493356 RPS12P25398 132 aaKnown RBP27.96■■■□□ 2.07
PFDN4-205ENST00000493356 KRT26Q7Z3Y9 468 aa27.96■■■□□ 2.07
PFDN4-205ENST00000493356 RTL9Q8NET4 1388 aa27.96■■■□□ 2.07
PFDN4-205ENST00000493356 ECE2O60344 883 aa27.95■■■□□ 2.06
PFDN4-205ENST00000493356 RTL5Q5HYW3 569 aaPredicted RBP27.95■■■□□ 2.06
PFDN4-205ENST00000493356 RUNDC1Q96C34 613 aa27.95■■■□□ 2.06
PFDN4-205ENST00000493356 KCNQ5Q9NR82 932 aa27.95■■■□□ 2.06
PFDN4-205ENST00000493356 TRIM28Q13263 835 aaKnown RBP27.94■■■□□ 2.06
PFDN4-205ENST00000493356 DOK7Q18PE1 504 aa27.94■■■□□ 2.06
PFDN4-205ENST00000493356 EYA3Q99504 573 aa27.94■■■□□ 2.06
PFDN4-205ENST00000493356 HYPKQ9NX55 129 aa27.94■■■□□ 2.06
PFDN4-205ENST00000493356 SCN9AQ15858 1988 aa27.93■■■□□ 2.06
PFDN4-205ENST00000493356 IRS4O14654 1257 aaPredicted RBP27.93■■■□□ 2.06
PFDN4-205ENST00000493356 TBC1D16Q8TBP0 767 aa27.93■■■□□ 2.06
PFDN4-205ENST00000493356 MYBBP1AQ9BQG0 1328 aaKnown RBP27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms