RNA–Protein interactions for RNA: ENST00000493213.1

CDK16-207, Transcript of cyclin dependent kinase 16, humanhuman

TSL 3

Gene CDK16, Length 866 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-207ENST00000493213 GPTP24298 496 aa13.7□□□□□ -0.22
CDK16-207ENST00000493213 PPEF1O14829 653 aaPredicted RBP13.69□□□□□ -0.22
CDK16-207ENST00000493213 EIF2S2P20042 333 aaKnown RBP13.69□□□□□ -0.22
CDK16-207ENST00000493213 EPHX2P34913 555 aa13.69□□□□□ -0.22
CDK16-207ENST00000493213 EIF6P56537 245 aaKnown RBP13.69□□□□□ -0.22
CDK16-207ENST00000493213 TCIRG1Q13488 830 aa13.69□□□□□ -0.22
CDK16-207ENST00000493213 WDR43Q15061 677 aaKnown RBP eCLIP13.69□□□□□ -0.22
CDK16-207ENST00000493213 ASTLQ6HA08 431 aaPredicted RBP13.69□□□□□ -0.22
CDK16-207ENST00000493213 TMC4Q7Z404 712 aa13.69□□□□□ -0.22
CDK16-207ENST00000493213 SUPT20HQ8NEM7 779 aa13.69□□□□□ -0.22
CDK16-207ENST00000493213 RTFDC1Q9BY42 306 aaPredicted RBP13.69□□□□□ -0.22
CDK16-207ENST00000493213 CHMP4AQ9BY43 222 aa13.69□□□□□ -0.22
CDK16-207ENST00000493213 ATP6V0A2Q9Y487 856 aa13.69□□□□□ -0.22
CDK16-207ENST00000493213 ZNF541Q9H0D2 1346 aa13.68□□□□□ -0.22
CDK16-207ENST00000493213 ITGBL1O95965 494 aaPredicted RBP13.68□□□□□ -0.22
CDK16-207ENST00000493213 PYGBP11216 843 aa13.68□□□□□ -0.22
CDK16-207ENST00000493213 DDX10Q13206 875 aaKnown RBP13.68□□□□□ -0.22
CDK16-207ENST00000493213 OLFM4Q6UX06 510 aa13.68□□□□□ -0.22
CDK16-207ENST00000493213 COPS6Q7L5N1 327 aa13.68□□□□□ -0.22
CDK16-207ENST00000493213 CFAP44Q96MT7 982 aa13.68□□□□□ -0.22
CDK16-207ENST00000493213 TRIM35Q9UPQ4 493 aa13.68□□□□□ -0.22
CDK16-207ENST00000493213 ATMINO43313 823 aaPredicted RBP13.67□□□□□ -0.22
CDK16-207ENST00000493213 POTEJP0CG39 1038 aa13.67□□□□□ -0.22
CDK16-207ENST00000493213 NLRP10Q86W26 655 aa13.67□□□□□ -0.22
CDK16-207ENST00000493213 SP8Q8IXZ3 490 aa13.67□□□□□ -0.22
CDK16-207ENST00000493213 DBF4Q9UBU7 674 aaPredicted RBP13.67□□□□□ -0.22
CDK16-207ENST00000493213 ADAMTSL1Q8N6G6 1762 aa13.66□□□□□ -0.22
CDK16-207ENST00000493213 TMEM88BA6NKF7 163 aa13.66□□□□□ -0.22
CDK16-207ENST00000493213 CALD1Q05682 793 aaKnown RBP13.66□□□□□ -0.22
CDK16-207ENST00000493213 TRIM28Q13263 835 aaKnown RBP13.66□□□□□ -0.22
CDK16-207ENST00000493213 PROSER3Q2NL68 480 aa13.66□□□□□ -0.22
CDK16-207ENST00000493213 LARGE2Q8N3Y3 721 aa13.66□□□□□ -0.22
CDK16-207ENST00000493213 PLBD2Q8NHP8 589 aa13.66□□□□□ -0.22
CDK16-207ENST00000493213 XAGE3Q8WTP9 111 aa13.66□□□□□ -0.22
CDK16-207ENST00000493213 HYPKQ9NX55 129 aa13.66□□□□□ -0.22
CDK16-207ENST00000493213 ADAMTS8Q9UP79 889 aa13.66□□□□□ -0.22
CDK16-207ENST00000493213 CNTNAP1P78357 1384 aa13.66□□□□□ -0.22
CDK16-207ENST00000493213 SH3TC1Q8TE82 1336 aa13.65□□□□□ -0.22
CDK16-207ENST00000493213 POTEMA6NI47 508 aa13.65□□□□□ -0.22
CDK16-207ENST00000493213 LMOD1P29536 600 aaPredicted RBP13.65□□□□□ -0.22
CDK16-207ENST00000493213 TIE1P35590 1138 aa13.65□□□□□ -0.22
CDK16-207ENST00000493213 USP50Q70EL3 339 aaPredicted RBP13.65□□□□□ -0.22
CDK16-207ENST00000493213 TNS4Q8IZW8 715 aa13.65□□□□□ -0.22
CDK16-207ENST00000493213 PRKRIP1Q9H875 184 aaPredicted RBP13.65□□□□□ -0.22
CDK16-207ENST00000493213 TRMT112Q9UI30 125 aaKnown RBP13.65□□□□□ -0.22
CDK16-207ENST00000493213 CIZ1Q9ULV3 898 aaPredicted RBP13.65□□□□□ -0.22
CDK16-207ENST00000493213 CDHR2Q9BYE9 1310 aa13.64□□□□□ -0.23
CDK16-207ENST00000493213 ZNF853P0CG23 659 aa13.64□□□□□ -0.23
CDK16-207ENST00000493213 HSPA1AP0DMV8 641 aaKnown RBP13.64□□□□□ -0.23
CDK16-207ENST00000493213 HSPA1BP0DMV9 641 aaKnown RBP13.64□□□□□ -0.23
CDK16-207ENST00000493213 HSP90B1P14625 803 aaKnown RBP13.64□□□□□ -0.23
CDK16-207ENST00000493213 EAPPQ56P03 285 aaPredicted RBP13.64□□□□□ -0.23
CDK16-207ENST00000493213 HDGFL1Q5TGJ6 251 aa13.64□□□□□ -0.23
CDK16-207ENST00000493213 ANKRD13DQ6ZTN6 518 aa13.64□□□□□ -0.23
CDK16-207ENST00000493213 DDX46Q7L014 1031 aaKnown RBP13.64□□□□□ -0.23
CDK16-207ENST00000493213 IFNL1Q8IU54 200 aa13.64□□□□□ -0.23
CDK16-207ENST00000493213 NIM1KQ8IY84 436 aa13.64□□□□□ -0.23
CDK16-207ENST00000493213 CNTROBQ8N137 903 aa13.64□□□□□ -0.23
CDK16-207ENST00000493213 METRNQ9UJH8 293 aa13.64□□□□□ -0.23
CDK16-207ENST00000493213 ABCC4O15439 1325 aa13.64□□□□□ -0.23
CDK16-207ENST00000493213 ANKRD36CQ5JPF3 1778 aa13.63□□□□□ -0.23
CDK16-207ENST00000493213 AIMP1Q12904 312 aaKnown RBP13.63□□□□□ -0.23
CDK16-207ENST00000493213 GRAPQ13588 217 aa13.63□□□□□ -0.23
CDK16-207ENST00000493213 SF3B3Q15393 1217 aaKnown RBP13.63□□□□□ -0.23
CDK16-207ENST00000493213 NEUROD2Q15784 382 aa13.63□□□□□ -0.23
CDK16-207ENST00000493213 C3orf67Q6ZVT6 689 aa13.63□□□□□ -0.23
CDK16-207ENST00000493213 CCDC146Q8IYE0 955 aa13.63□□□□□ -0.23
CDK16-207ENST00000493213 GRAPLQ8TC17 118 aaPredicted RBP13.63□□□□□ -0.23
CDK16-207ENST00000493213 ISCA1Q9BUE6 129 aa13.63□□□□□ -0.23
CDK16-207ENST00000493213 ZNRF3Q9ULT6 936 aa13.63□□□□□ -0.23
CDK16-207ENST00000493213 RASSF10A6NK89 507 aa13.62□□□□□ -0.23
CDK16-207ENST00000493213 PPIP5K2O43314 1243 aa13.62□□□□□ -0.23
CDK16-207ENST00000493213 ANXA1P04083 346 aa13.62□□□□□ -0.23
CDK16-207ENST00000493213 CHRM1P11229 460 aaPredicted RBP13.62□□□□□ -0.23
CDK16-207ENST00000493213 SCNN1DP51172 638 aa13.62□□□□□ -0.23
CDK16-207ENST00000493213 GNAI1P63096 354 aa13.62□□□□□ -0.23
CDK16-207ENST00000493213 KIAA2012Q0VF49 1180 aa13.62□□□□□ -0.23
CDK16-207ENST00000493213 DPP8Q6V1X1 898 aaPredicted RBP13.62□□□□□ -0.23
CDK16-207ENST00000493213 MPNDQ8N594 471 aa13.62□□□□□ -0.23
CDK16-207ENST00000493213 IFT57Q9NWB7 429 aa13.62□□□□□ -0.23
CDK16-207ENST00000493213 CHPF2Q9P2E5 772 aa13.62□□□□□ -0.23
CDK16-207ENST00000493213 COL4A5P29400 1685 aa13.61□□□□□ -0.23
CDK16-207ENST00000493213 DUSP27Q5VZP5 1158 aa13.61□□□□□ -0.23
CDK16-207ENST00000493213 POTEGQ6S5H5 508 aa13.61□□□□□ -0.23
CDK16-207ENST00000493213 ADARB2Q9NS39 739 aaKnown RBP13.61□□□□□ -0.23
CDK16-207ENST00000493213 BMP2KQ9NSY1 1161 aaPredicted RBP13.61□□□□□ -0.23
CDK16-207ENST00000493213 TRPC6Q9Y210 931 aa13.61□□□□□ -0.23
CDK16-207ENST00000493213 GJA3Q9Y6H8 435 aa13.61□□□□□ -0.23
CDK16-207ENST00000493213 HCLS1P14317 486 aaPredicted RBP13.6□□□□□ -0.23
CDK16-207ENST00000493213 TNIP1Q15025 636 aa13.6□□□□□ -0.23
CDK16-207ENST00000493213 ZC3H15Q8WU90 426 aaKnown RBP13.6□□□□□ -0.23
CDK16-207ENST00000493213 PRDM10Q9NQV6 1147 aa13.6□□□□□ -0.23
CDK16-207ENST00000493213 GPRC5DQ9NZD1 345 aa13.6□□□□□ -0.23
CDK16-207ENST00000493213 MKRN1Q9UHC7 482 aaKnown RBP13.6□□□□□ -0.23
CDK16-207ENST00000493213 PGAP2Q9UHJ9 254 aa13.6□□□□□ -0.23
CDK16-207ENST00000493213 LAS1LQ9Y4W2 734 aaKnown RBP13.6□□□□□ -0.23
CDK16-207ENST00000493213 EPS15P42566 896 aa13.59□□□□□ -0.23
CDK16-207ENST00000493213 ATN1P54259 1190 aaPredicted RBP13.59□□□□□ -0.23
CDK16-207ENST00000493213 CXCL9Q07325 125 aa13.59□□□□□ -0.23
CDK16-207ENST00000493213 AOC3Q16853 763 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms