RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 C7orf43Q8WVR3 580 aa16.19■□□□□ 0.18
CLIP2-209ENST00000493166 COL4A1P02462 1669 aa16.18■□□□□ 0.18
CLIP2-209ENST00000493166 CTSWP56202 376 aa16.18■□□□□ 0.18
CLIP2-209ENST00000493166 GRAPQ13588 217 aa16.18■□□□□ 0.18
CLIP2-209ENST00000493166 CCDC152Q4G0S7 254 aa16.18■□□□□ 0.18
CLIP2-209ENST00000493166 GRAPLQ8TC17 118 aaPredicted RBP16.18■□□□□ 0.18
CLIP2-209ENST00000493166 API5Q9BZZ5 524 aaKnown RBP16.18■□□□□ 0.18
CLIP2-209ENST00000493166 C9orf78Q9NZ63 289 aaPredicted RBP16.18■□□□□ 0.18
CLIP2-209ENST00000493166 NFKBIEO00221 500 aa16.17■□□□□ 0.18
CLIP2-209ENST00000493166 GRM8O00222 908 aa16.17■□□□□ 0.18
CLIP2-209ENST00000493166 BCAR3O75815 825 aa16.17■□□□□ 0.18
CLIP2-209ENST00000493166 CASP7P55210 303 aa16.17■□□□□ 0.18
CLIP2-209ENST00000493166 OLFM4Q6UX06 510 aa16.17■□□□□ 0.18
CLIP2-209ENST00000493166 CCDC85AQ96PX6 553 aaPredicted RBP16.17■□□□□ 0.18
CLIP2-209ENST00000493166 TMX4Q9H1E5 349 aaPredicted RBP16.17■□□□□ 0.18
CLIP2-209ENST00000493166 TAOK3Q9H2K8 898 aa16.17■□□□□ 0.18
CLIP2-209ENST00000493166 BBOX1O75936 387 aa16.16■□□□□ 0.18
CLIP2-209ENST00000493166 C9orf131Q5VYM1 1079 aa16.16■□□□□ 0.18
CLIP2-209ENST00000493166 CC2D2BQ6DHV5 1058 aa16.16■□□□□ 0.18
CLIP2-209ENST00000493166 RTKN2Q8IZC4 609 aa16.16■□□□□ 0.18
CLIP2-209ENST00000493166 YTHDC1Q96MU7 727 aaKnown RBP16.16■□□□□ 0.18
CLIP2-209ENST00000493166 RNF181Q9P0P0 153 aa16.16■□□□□ 0.18
CLIP2-209ENST00000493166 LTBP3Q9NS15 1303 aa16.16■□□□□ 0.18
CLIP2-209ENST00000493166 IPO8O15397 1037 aaKnown RBP16.15■□□□□ 0.18
CLIP2-209ENST00000493166 LMNB1P20700 586 aa16.15■□□□□ 0.18
CLIP2-209ENST00000493166 TMC4Q7Z404 712 aa16.15■□□□□ 0.18
CLIP2-209ENST00000493166 ARHGAP45Q92619 1136 aa16.15■□□□□ 0.18
CLIP2-209ENST00000493166 FRAT1Q92837 279 aaPredicted RBP16.15■□□□□ 0.18
CLIP2-209ENST00000493166 CELF1Q92879 486 aaKnown RBP16.15■□□□□ 0.18
CLIP2-209ENST00000493166 PLA2G12BQ9BX93 195 aa16.15■□□□□ 0.18
CLIP2-209ENST00000493166 ATP6V0A2Q9Y487 856 aa16.15■□□□□ 0.18
CLIP2-209ENST00000493166 SNED1Q8TER0 1413 aa16.14■□□□□ 0.17
CLIP2-209ENST00000493166 CCT4P50991 539 aaKnown RBP16.14■□□□□ 0.17
CLIP2-209ENST00000493166 FKBP4Q02790 459 aaKnown RBP eCLIP16.14■□□□□ 0.17
CLIP2-209ENST00000493166 GRIPAP1Q4V328 841 aa16.14■□□□□ 0.17
CLIP2-209ENST00000493166 TTLL11Q8NHH1 800 aa16.14■□□□□ 0.17
CLIP2-209ENST00000493166 SEC31BQ9NQW1 1179 aa16.14■□□□□ 0.17
CLIP2-209ENST00000493166 LTBP1Q14766 1721 aa16.14■□□□□ 0.17
CLIP2-209ENST00000493166 RTL9Q8NET4 1388 aa16.13■□□□□ 0.17
CLIP2-209ENST00000493166 A0A1B0GUL6 1792 aa16.13■□□□□ 0.17
CLIP2-209ENST00000493166 SLC51AQ86UW1 340 aa16.13■□□□□ 0.17
CLIP2-209ENST00000493166 SP8Q8IXZ3 490 aa16.13■□□□□ 0.17
CLIP2-209ENST00000493166 GREM2Q9H772 168 aa16.13■□□□□ 0.17
CLIP2-209ENST00000493166 PRELPP51888 382 aa16.12■□□□□ 0.17
CLIP2-209ENST00000493166 RPS8P62241 208 aaKnown RBP16.12■□□□□ 0.17
CLIP2-209ENST00000493166 ATF7IPQ6VMQ6 1270 aa16.12■□□□□ 0.17
CLIP2-209ENST00000493166 ANKRD18AQ8IVF6 992 aa16.12■□□□□ 0.17
CLIP2-209ENST00000493166 ZNF784Q8NCA9 323 aaPredicted RBP16.12■□□□□ 0.17
CLIP2-209ENST00000493166 CDC5LQ99459 802 aaKnown RBP16.12■□□□□ 0.17
CLIP2-209ENST00000493166 PSMD1Q99460 953 aa16.12■□□□□ 0.17
CLIP2-209ENST00000493166 UTYO14607 1347 aa16.12■□□□□ 0.17
CLIP2-209ENST00000493166 NBPF7P0C2Y1 421 aaPredicted RBP16.11■□□□□ 0.17
CLIP2-209ENST00000493166 TRIM27P14373 513 aa16.11■□□□□ 0.17
CLIP2-209ENST00000493166 FOXO4P98177 505 aa16.11■□□□□ 0.17
CLIP2-209ENST00000493166 FAM161AQ3B820 660 aa16.11■□□□□ 0.17
CLIP2-209ENST00000493166 ZKSCAN2Q63HK3 967 aa16.11■□□□□ 0.17
CLIP2-209ENST00000493166 ZNF277Q9NRM2 450 aaPredicted RBP16.11■□□□□ 0.17
CLIP2-209ENST00000493166 CHMP3Q9Y3E7 222 aa16.11■□□□□ 0.17
CLIP2-209ENST00000493166 DUOX1Q9NRD9 1551 aa16.1■□□□□ 0.17
CLIP2-209ENST00000493166 CSF1RP07333 972 aa16.1■□□□□ 0.17
CLIP2-209ENST00000493166 DPP8Q6V1X1 898 aaPredicted RBP16.1■□□□□ 0.17
CLIP2-209ENST00000493166 SUCLG2Q96I99 432 aa16.1■□□□□ 0.17
CLIP2-209ENST00000493166 ZC3H4Q9UPT8 1303 aaKnown RBP16.1■□□□□ 0.17
CLIP2-209ENST00000493166 ITGA6P23229 1130 aa16.09■□□□□ 0.17
CLIP2-209ENST00000493166 IARSP41252 1262 aaKnown RBP16.09■□□□□ 0.17
CLIP2-209ENST00000493166 EPHA10Q5JZY3 1008 aa16.09■□□□□ 0.17
CLIP2-209ENST00000493166 LMBR1LQ6UX01 489 aa16.09■□□□□ 0.17
CLIP2-209ENST00000493166 MPNDQ8N594 471 aa16.09■□□□□ 0.17
CLIP2-209ENST00000493166 CLUAP1Q96AJ1 413 aa16.09■□□□□ 0.17
CLIP2-209ENST00000493166 USP44Q9H0E7 712 aa16.09■□□□□ 0.17
CLIP2-209ENST00000493166 ANKRD18BA2A2Z9 1011 aa16.08■□□□□ 0.16
CLIP2-209ENST00000493166 IGHMBP2P38935 993 aaKnown RBP16.08■□□□□ 0.16
CLIP2-209ENST00000493166 IFIT5Q13325 482 aaKnown RBP16.08■□□□□ 0.16
CLIP2-209ENST00000493166 INTS3Q68E01 1043 aaKnown RBP16.08■□□□□ 0.16
CLIP2-209ENST00000493166 SUPT20HQ8NEM7 779 aa16.08■□□□□ 0.16
CLIP2-209ENST00000493166 ZNF526Q8TF50 670 aaPredicted RBP16.08■□□□□ 0.16
CLIP2-209ENST00000493166 RCAN3Q9UKA8 241 aa16.08■□□□□ 0.16
CLIP2-209ENST00000493166 TNNQ9UQP3 1299 aa16.08■□□□□ 0.16
CLIP2-209ENST00000493166 FTSJ3Q8IY81 847 aaKnown RBP16.07■□□□□ 0.16
CLIP2-209ENST00000493166 KAZALD1Q96I82 304 aa16.07■□□□□ 0.16
CLIP2-209ENST00000493166 BICC1Q9H694 974 aaKnown RBP16.07■□□□□ 0.16
CLIP2-209ENST00000493166 NSFL1CQ9UNZ2 370 aaKnown RBP16.07■□□□□ 0.16
CLIP2-209ENST00000493166 UBTFL1P0CB47 393 aaPredicted RBP16.06■□□□□ 0.16
CLIP2-209ENST00000493166 GPSM2P81274 684 aa16.06■□□□□ 0.16
CLIP2-209ENST00000493166 CCDC57Q2TAC2 916 aa16.06■□□□□ 0.16
CLIP2-209ENST00000493166 TAF7LQ5H9L4 462 aa16.06■□□□□ 0.16
CLIP2-209ENST00000493166 MPHOSPH8Q99549 860 aa16.06■□□□□ 0.16
CLIP2-209ENST00000493166 RTFDC1Q9BY42 306 aaPredicted RBP16.06■□□□□ 0.16
CLIP2-209ENST00000493166 BSDC1Q9NW68 430 aaPredicted RBP16.06■□□□□ 0.16
CLIP2-209ENST00000493166 ANKIB1Q9P2G1 1089 aa16.06■□□□□ 0.16
CLIP2-209ENST00000493166 COL4A5P29400 1685 aa16.05■□□□□ 0.16
CLIP2-209ENST00000493166 PPIP5K2O43314 1243 aa16.05■□□□□ 0.16
CLIP2-209ENST00000493166 DZIP1LQ8IYY4 767 aaKnown RBP16.05■□□□□ 0.16
CLIP2-209ENST00000493166 LARGE2Q8N3Y3 721 aa16.05■□□□□ 0.16
CLIP2-209ENST00000493166 HDAC5Q9UQL6 1122 aa16.05■□□□□ 0.16
CLIP2-209ENST00000493166 KDM2BQ8NHM5 1336 aa16.04■□□□□ 0.16
CLIP2-209ENST00000493166 C6orf229H3BNL8 230 aa16.04■□□□□ 0.16
CLIP2-209ENST00000493166 AOC3Q16853 763 aa16.04■□□□□ 0.16
CLIP2-209ENST00000493166 RABL6Q3YEC7 729 aaPredicted RBP16.04■□□□□ 0.16
CLIP2-209ENST00000493166 TMEM57Q8N5G2 664 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms