RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 ANP32BQ92688 251 aaKnown RBP15.42■□□□□ 0.06
PRAME-213ENST00000492657 ZNF330Q9Y3S2 320 aaPredicted RBP15.42■□□□□ 0.06
PRAME-213ENST00000492657 SYCE3A1L190 88 aa15.41■□□□□ 0.06
PRAME-213ENST00000492657 ZKSCAN1P17029 563 aaPredicted RBP15.41■□□□□ 0.06
PRAME-213ENST00000492657 VPS53Q5VIR6 699 aa15.41■□□□□ 0.06
PRAME-213ENST00000492657 CCDC129Q6ZRS4 1044 aa15.41■□□□□ 0.06
PRAME-213ENST00000492657 ZNF594Q96JF6 807 aaPredicted RBP15.41■□□□□ 0.06
PRAME-213ENST00000492657 SMC3Q9UQE7 1217 aa15.41■□□□□ 0.06
PRAME-213ENST00000492657 HIP1O00291 1037 aa15.41■□□□□ 0.06
PRAME-213ENST00000492657 ATP5JP18859 108 aa15.41■□□□□ 0.06
PRAME-213ENST00000492657 ME3Q16798 604 aa15.41■□□□□ 0.06
PRAME-213ENST00000492657 SLFNL1Q499Z3 407 aa15.41■□□□□ 0.06
PRAME-213ENST00000492657 USP48Q86UV5 1035 aa15.41■□□□□ 0.06
PRAME-213ENST00000492657 SEC62Q99442 399 aaKnown RBP15.41■□□□□ 0.06
PRAME-213ENST00000492657 CARD10Q9BWT7 1032 aa15.41■□□□□ 0.06
PRAME-213ENST00000492657 TM6SF1Q9BZW5 370 aa15.4■□□□□ 0.06
PRAME-213ENST00000492657 CWC25Q9NXE8 425 aaPredicted RBP15.4■□□□□ 0.06
PRAME-213ENST00000492657 COL15A1P39059 1388 aa15.4■□□□□ 0.06
PRAME-213ENST00000492657 TIMM10P62072 90 aa15.4■□□□□ 0.06
PRAME-213ENST00000492657 DDX46Q7L014 1031 aaKnown RBP15.4■□□□□ 0.06
PRAME-213ENST00000492657 FAM13BQ9NYF5 915 aa15.4■□□□□ 0.06
PRAME-213ENST00000492657 TPCN1Q9ULQ1 816 aa15.4■□□□□ 0.06
PRAME-213ENST00000492657 NKX1-1Q15270 411 aaPredicted RBP15.39■□□□□ 0.06
PRAME-213ENST00000492657 ATG9AQ7Z3C6 839 aa15.39■□□□□ 0.06
PRAME-213ENST00000492657 NEUROD6Q96NK8 337 aa15.39■□□□□ 0.06
PRAME-213ENST00000492657 SNRKQ9NRH2 765 aa15.39■□□□□ 0.06
PRAME-213ENST00000492657 CNPY2Q9Y2B0 182 aa15.39■□□□□ 0.06
PRAME-213ENST00000492657 MED23Q9ULK4 1368 aa15.39■□□□□ 0.05
PRAME-213ENST00000492657 STX6O43752 255 aa15.39■□□□□ 0.05
PRAME-213ENST00000492657 TAF5LO75529 589 aa15.39■□□□□ 0.05
PRAME-213ENST00000492657 ZSCAN22P10073 491 aaPredicted RBP15.39■□□□□ 0.05
PRAME-213ENST00000492657 GJB2P29033 226 aa15.39■□□□□ 0.05
PRAME-213ENST00000492657 CCDC173Q0VFZ6 552 aa15.39■□□□□ 0.05
PRAME-213ENST00000492657 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.39■□□□□ 0.05
PRAME-213ENST00000492657 LRRC24Q50LG9 513 aa15.39■□□□□ 0.05
PRAME-213ENST00000492657 PUS3Q9BZE2 481 aaKnown RBP15.38■□□□□ 0.05
PRAME-213ENST00000492657 ASAP1Q9ULH1 1129 aa15.38■□□□□ 0.05
PRAME-213ENST00000492657 KCPQ6ZWJ8 1503 aa15.38■□□□□ 0.05
PRAME-213ENST00000492657 PLEKHG2Q9H7P9 1386 aa15.38■□□□□ 0.05
PRAME-213ENST00000492657 LAMB4A4D0S4 1761 aa15.37■□□□□ 0.05
PRAME-213ENST00000492657 CCDC85AQ96PX6 553 aaPredicted RBP15.37■□□□□ 0.05
PRAME-213ENST00000492657 PARP4Q9UKK3 1724 aaKnown RBP15.37■□□□□ 0.05
PRAME-213ENST00000492657 MBD3O95983 291 aa15.37■□□□□ 0.05
PRAME-213ENST00000492657 R3HCC1Q9Y3T6 440 aaKnown RBP15.37■□□□□ 0.05
PRAME-213ENST00000492657 STRCQ7RTU9 1775 aa15.37■□□□□ 0.05
PRAME-213ENST00000492657 HAUS7Q99871 368 aa15.36■□□□□ 0.05
PRAME-213ENST00000492657 BLOC1S2Q6QNY1 142 aa15.36■□□□□ 0.05
PRAME-213ENST00000492657 LRSAM1Q6UWE0 723 aa15.36■□□□□ 0.05
PRAME-213ENST00000492657 ZSCAN31Q96LW9 406 aaPredicted RBP15.36■□□□□ 0.05
PRAME-213ENST00000492657 ZNF609O15014 1411 aa15.36■□□□□ 0.05
PRAME-213ENST00000492657 F13A1P00488 732 aa15.35■□□□□ 0.05
PRAME-213ENST00000492657 DNAJC10Q8IXB1 793 aa15.35■□□□□ 0.05
PRAME-213ENST00000492657 RNF214Q8ND24 703 aa15.35■□□□□ 0.05
PRAME-213ENST00000492657 PPP1R9BQ96SB3 815 aa15.35■□□□□ 0.05
PRAME-213ENST00000492657 TMOD3Q9NYL9 352 aa15.35■□□□□ 0.05
PRAME-213ENST00000492657 MTMR6Q9Y217 621 aa15.35■□□□□ 0.05
PRAME-213ENST00000492657 GOLIM4O00461 696 aa15.35■□□□□ 0.05
PRAME-213ENST00000492657 MPNDQ8N594 471 aa15.35■□□□□ 0.05
PRAME-213ENST00000492657 PIGBQ92521 554 aa15.35■□□□□ 0.05
PRAME-213ENST00000492657 KDM4FA0A1W2PPD8 638 aa15.35■□□□□ 0.05
PRAME-213ENST00000492657 RPS6KB1P23443 525 aa15.35■□□□□ 0.05
PRAME-213ENST00000492657 PSMA5P28066 241 aa15.35■□□□□ 0.05
PRAME-213ENST00000492657 STK3Q13188 491 aa15.35■□□□□ 0.05
PRAME-213ENST00000492657 CCDC191Q8NCU4 936 aa15.35■□□□□ 0.05
PRAME-213ENST00000492657 SH2B1Q9NRF2 756 aaPredicted RBP15.35■□□□□ 0.05
PRAME-213ENST00000492657 UBR2Q8IWV8 1755 aa15.34■□□□□ 0.05
PRAME-213ENST00000492657 VPS37CA5D8V6 355 aaPredicted RBP15.34■□□□□ 0.05
PRAME-213ENST00000492657 FIBPO43427 364 aa15.34■□□□□ 0.05
PRAME-213ENST00000492657 TOB2Q14106 344 aaPredicted RBP15.34■□□□□ 0.05
PRAME-213ENST00000492657 RNF20Q5VTR2 975 aa15.34■□□□□ 0.05
PRAME-213ENST00000492657 SYNE4Q8N205 404 aa15.34■□□□□ 0.05
PRAME-213ENST00000492657 BTG4Q9NY30 223 aa15.34■□□□□ 0.05
PRAME-213ENST00000492657 SHANK3Q9BYB0 1731 aa15.34■□□□□ 0.05
PRAME-213ENST00000492657 EYA2O00167 538 aa15.33■□□□□ 0.04
PRAME-213ENST00000492657 DNM1Q05193 864 aaKnown RBP15.33■□□□□ 0.04
PRAME-213ENST00000492657 NUP188Q5SRE5 1749 aa15.33■□□□□ 0.04
PRAME-213ENST00000492657 FAM89AQ96GI7 184 aa15.33■□□□□ 0.04
PRAME-213ENST00000492657 MCMDC2Q4G0Z9 681 aa15.32■□□□□ 0.04
PRAME-213ENST00000492657 USPL1Q5W0Q7 1092 aa15.32■□□□□ 0.04
PRAME-213ENST00000492657 FERMT3Q86UX7 667 aa15.32■□□□□ 0.04
PRAME-213ENST00000492657 KBTBD3Q8NAB2 608 aa15.32■□□□□ 0.04
PRAME-213ENST00000492657 ISCA1Q9BUE6 129 aa15.32■□□□□ 0.04
PRAME-213ENST00000492657 LRRC2Q9BYS8 371 aa15.32■□□□□ 0.04
PRAME-213ENST00000492657 PRDM10Q9NQV6 1147 aa15.32■□□□□ 0.04
PRAME-213ENST00000492657 TJP1Q07157 1748 aa15.32■□□□□ 0.04
PRAME-213ENST00000492657 JCADQ9P266 1359 aa15.32■□□□□ 0.04
PRAME-213ENST00000492657 MSNP26038 577 aaKnown RBP15.32■□□□□ 0.04
PRAME-213ENST00000492657 IL15P40933 162 aaPredicted RBP15.32■□□□□ 0.04
PRAME-213ENST00000492657 TCIRG1Q13488 830 aa15.32■□□□□ 0.04
PRAME-213ENST00000492657 FAM173BQ6P4H8 233 aa15.32■□□□□ 0.04
PRAME-213ENST00000492657 TNS2Q63HR2 1409 aa15.32■□□□□ 0.04
PRAME-213ENST00000492657 A0A0G2JLW4 131 aa15.31■□□□□ 0.04
PRAME-213ENST00000492657 CYP21A2P08686 494 aa15.31■□□□□ 0.04
PRAME-213ENST00000492657 ZSCAN30Q86W11 494 aa15.31■□□□□ 0.04
PRAME-213ENST00000492657 ATG3Q9NT62 314 aa15.31■□□□□ 0.04
PRAME-213ENST00000492657 PAG1Q9NWQ8 432 aa15.31■□□□□ 0.04
PRAME-213ENST00000492657 A0A1B0GUL7 405 aa15.31■□□□□ 0.04
PRAME-213ENST00000492657 LARP1BQ659C4 914 aaKnown RBP15.31■□□□□ 0.04
PRAME-213ENST00000492657 ABCA3Q99758 1704 aa15.31■□□□□ 0.04
PRAME-213ENST00000492657 TOGARAM1Q9Y4F4 1720 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms