RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 TMX4Q9H1E5 349 aaPredicted RBP7.45□□□□□ -1.22
SEC13-219ENST00000492602 VPS33BQ9H267 617 aa7.45□□□□□ -1.22
SEC13-219ENST00000492602 POLKQ9UBT6 870 aa7.45□□□□□ -1.22
SEC13-219ENST00000492602 NIP7Q9Y221 180 aaKnown RBP eCLIP7.45□□□□□ -1.22
SEC13-219ENST00000492602 PRAMEF22A3QJZ6 481 aa7.44□□□□□ -1.22
SEC13-219ENST00000492602 UBE2Q2LH0YL09 131 aa7.44□□□□□ -1.22
SEC13-219ENST00000492602 PPEF1O14829 653 aaPredicted RBP7.44□□□□□ -1.22
SEC13-219ENST00000492602 A1BGP04217 495 aa7.44□□□□□ -1.22
SEC13-219ENST00000492602 PLA2G5P39877 138 aa7.44□□□□□ -1.22
SEC13-219ENST00000492602 FKBP1BP68106 108 aa7.44□□□□□ -1.22
SEC13-219ENST00000492602 CLEC4GQ6UXB4 293 aa7.44□□□□□ -1.22
SEC13-219ENST00000492602 MOB2Q70IA6 237 aa7.44□□□□□ -1.22
SEC13-219ENST00000492602 AEBP1Q8IUX7 1158 aa7.44□□□□□ -1.22
SEC13-219ENST00000492602 FAM122AQ96E09 287 aa7.44□□□□□ -1.22
SEC13-219ENST00000492602 ERO1AQ96HE7 468 aa7.44□□□□□ -1.22
SEC13-219ENST00000492602 EFCC1Q9HA90 598 aa7.44□□□□□ -1.22
SEC13-219ENST00000492602 ZNF652Q9Y2D9 606 aa7.44□□□□□ -1.22
SEC13-219ENST00000492602 ERBB4Q15303 1308 aa7.44□□□□□ -1.22
SEC13-219ENST00000492602 MRC1P22897 1456 aa7.43□□□□□ -1.22
SEC13-219ENST00000492602 RNMTO43148 476 aaKnown RBP7.43□□□□□ -1.22
SEC13-219ENST00000492602 CRY2Q49AN0 593 aa7.43□□□□□ -1.22
SEC13-219ENST00000492602 NBPF11Q86T75 865 aa7.43□□□□□ -1.22
SEC13-219ENST00000492602 SUPT20HQ8NEM7 779 aa7.43□□□□□ -1.22
SEC13-219ENST00000492602 CD99L2Q8TCZ2 262 aa7.43□□□□□ -1.22
SEC13-219ENST00000492602 TEX13AQ9BXU3 409 aaPredicted RBP7.43□□□□□ -1.22
SEC13-219ENST00000492602 GGA3Q9NZ52 723 aa7.43□□□□□ -1.22
SEC13-219ENST00000492602 ALDH1A1P00352 501 aa7.42□□□□□ -1.22
SEC13-219ENST00000492602 PIP4K2AP48426 406 aaPredicted RBP7.42□□□□□ -1.22
SEC13-219ENST00000492602 TTLL12Q14166 644 aaPredicted RBP7.42□□□□□ -1.22
SEC13-219ENST00000492602 SLC9C1Q4G0N8 1177 aa7.42□□□□□ -1.22
SEC13-219ENST00000492602 NCBP3Q53F19 620 aaKnown RBP7.42□□□□□ -1.22
SEC13-219ENST00000492602 GPR153Q6NV75 609 aa7.42□□□□□ -1.22
SEC13-219ENST00000492602 NUTM1Q86Y26 1132 aa7.42□□□□□ -1.22
SEC13-219ENST00000492602 DPF2Q92785 391 aa7.42□□□□□ -1.22
SEC13-219ENST00000492602 RBM17Q96I25 401 aaKnown RBP7.42□□□□□ -1.22
SEC13-219ENST00000492602 ZNF496Q96IT1 587 aaPredicted RBP7.42□□□□□ -1.22
SEC13-219ENST00000492602 TESK2Q96S53 571 aa7.42□□□□□ -1.22
SEC13-219ENST00000492602 MTMR10Q9NXD2 777 aa7.42□□□□□ -1.22
SEC13-219ENST00000492602 NR2E3Q9Y5X4 410 aa7.42□□□□□ -1.22
SEC13-219ENST00000492602 KIF20BQ96Q89 1820 aa7.42□□□□□ -1.22
SEC13-219ENST00000492602 POLR2AP24928 1970 aaKnown RBP7.42□□□□□ -1.22
SEC13-219ENST00000492602 YDJCA8MPS7 323 aa7.41□□□□□ -1.22
SEC13-219ENST00000492602 HOXA10P31260 410 aaPredicted RBP7.41□□□□□ -1.22
SEC13-219ENST00000492602 KIAA2012Q0VF49 1180 aa7.41□□□□□ -1.22
SEC13-219ENST00000492602 KIF4BQ2VIQ3 1234 aa7.41□□□□□ -1.22
SEC13-219ENST00000492602 SULT6B1Q6IMI4 303 aa7.41□□□□□ -1.22
SEC13-219ENST00000492602 DPP8Q6V1X1 898 aaPredicted RBP7.41□□□□□ -1.22
SEC13-219ENST00000492602 HTATIP2Q9BUP3 242 aa7.41□□□□□ -1.22
SEC13-219ENST00000492602 STAP2Q9UGK3 403 aa7.41□□□□□ -1.22
SEC13-219ENST00000492602 ASTN2O75129 1339 aaPredicted RBP7.41□□□□□ -1.22
SEC13-219ENST00000492602 HEG1Q9ULI3 1381 aa7.41□□□□□ -1.22
SEC13-219ENST00000492602 PSMD14O00487 310 aa7.4□□□□□ -1.22
SEC13-219ENST00000492602 ZBTB7BO15156 539 aaPredicted RBP7.4□□□□□ -1.22
SEC13-219ENST00000492602 HOXD11P31277 338 aaPredicted RBP7.4□□□□□ -1.22
SEC13-219ENST00000492602 ANGEL2Q5VTE6 544 aaKnown RBP7.4□□□□□ -1.22
SEC13-219ENST00000492602 CRAMP1Q96RY5 1269 aa7.4□□□□□ -1.22
SEC13-219ENST00000492602 CARD14Q9BXL6 1004 aa7.4□□□□□ -1.22
SEC13-219ENST00000492602 RTFDC1Q9BY42 306 aaPredicted RBP7.4□□□□□ -1.22
SEC13-219ENST00000492602 ATP6V0A2Q9Y487 856 aa7.4□□□□□ -1.22
SEC13-219ENST00000492602 PTCH2Q9Y6C5 1203 aa7.4□□□□□ -1.22
SEC13-219ENST00000492602 KIF7Q2M1P5 1343 aa7.4□□□□□ -1.22
SEC13-219ENST00000492602 ABCC12Q96J65 1359 aa7.4□□□□□ -1.22
SEC13-219ENST00000492602 ZNF609O15014 1411 aa7.39□□□□□ -1.23
SEC13-219ENST00000492602 SLC24A1O60721 1099 aa7.39□□□□□ -1.23
SEC13-219ENST00000492602 TCIRG1Q13488 830 aa7.39□□□□□ -1.23
SEC13-219ENST00000492602 NEUROD1Q13562 356 aa7.39□□□□□ -1.23
SEC13-219ENST00000492602 IFNL1Q8IU54 200 aa7.39□□□□□ -1.23
SEC13-219ENST00000492602 SIN3AQ96ST3 1273 aa7.39□□□□□ -1.23
SEC13-219ENST00000492602 NYXQ9GZU5 481 aa7.39□□□□□ -1.23
SEC13-219ENST00000492602 SCAF8Q9UPN6 1271 aaKnown RBP7.39□□□□□ -1.23
SEC13-219ENST00000492602 RPS12P25398 132 aaKnown RBP7.38□□□□□ -1.23
SEC13-219ENST00000492602 CAP1Q01518 475 aa7.38□□□□□ -1.23
SEC13-219ENST00000492602 SP3Q02447 781 aa7.38□□□□□ -1.23
SEC13-219ENST00000492602 SCARF1Q14162 830 aa7.38□□□□□ -1.23
SEC13-219ENST00000492602 PRAMEF18Q5VWM3 479 aa7.38□□□□□ -1.23
SEC13-219ENST00000492602 ZNF790Q6PG37 636 aa7.38□□□□□ -1.23
SEC13-219ENST00000492602 SH3TC2Q8TF17 1288 aa7.38□□□□□ -1.23
SEC13-219ENST00000492602 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.38□□□□□ -1.23
SEC13-219ENST00000492602 RIC1Q4ADV7 1423 aa7.37□□□□□ -1.23
SEC13-219ENST00000492602 RPTORQ8N122 1335 aa7.37□□□□□ -1.23
SEC13-219ENST00000492602 MANSC4A6NHS7 340 aaPredicted RBP7.37□□□□□ -1.23
SEC13-219ENST00000492602 INHBEP58166 350 aa7.37□□□□□ -1.23
SEC13-219ENST00000492602 HLFQ16534 295 aa7.37□□□□□ -1.23
SEC13-219ENST00000492602 SHISA4Q96DD7 197 aa7.37□□□□□ -1.23
SEC13-219ENST00000492602 FMNL2Q96PY5 1086 aa7.37□□□□□ -1.23
SEC13-219ENST00000492602 DBNDD1Q9H9R9 158 aa7.37□□□□□ -1.23
SEC13-219ENST00000492602 TMEM265A0A087WTH1 108 aa7.36□□□□□ -1.23
SEC13-219ENST00000492602 IGF2BP3O00425 579 aaKnown RBP eCLIP7.36□□□□□ -1.23
SEC13-219ENST00000492602 EVI5O60447 810 aa7.36□□□□□ -1.23
SEC13-219ENST00000492602 PTPN12Q05209 780 aaKnown RBP7.36□□□□□ -1.23
SEC13-219ENST00000492602 CRHR2Q13324 411 aa7.36□□□□□ -1.23
SEC13-219ENST00000492602 PRKG1Q13976 671 aa7.36□□□□□ -1.23
SEC13-219ENST00000492602 ARHGEF6Q15052 776 aa7.36□□□□□ -1.23
SEC13-219ENST00000492602 SPRYD7Q5W111 196 aa7.36□□□□□ -1.23
SEC13-219ENST00000492602 C3orf67Q6ZVT6 689 aa7.36□□□□□ -1.23
SEC13-219ENST00000492602 SYMPKQ92797 1274 aaKnown RBP7.36□□□□□ -1.23
SEC13-219ENST00000492602 KCNQ5Q9NR82 932 aa7.36□□□□□ -1.23
SEC13-219ENST00000492602 USP16Q9Y5T5 823 aa7.36□□□□□ -1.23
SEC13-219ENST00000492602 UBR2Q8IWV8 1755 aa7.36□□□□□ -1.23
SEC13-219ENST00000492602 MUC3AQ02505 3323 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms