RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 TAF1P21675 1872 aa18.92■□□□□ 0.62
SS18L1-205ENST00000492466 PPIP5K2O43314 1243 aa18.92■□□□□ 0.62
SS18L1-205ENST00000492466 DUSP27Q5VZP5 1158 aa18.92■□□□□ 0.62
SS18L1-205ENST00000492466 ANKRD13DQ6ZTN6 518 aa18.92■□□□□ 0.62
SS18L1-205ENST00000492466 ZNF428Q96B54 188 aa18.92■□□□□ 0.62
SS18L1-205ENST00000492466 TSR2Q969E8 191 aaKnown RBP18.91■□□□□ 0.62
SS18L1-205ENST00000492466 DBF4Q9UBU7 674 aaPredicted RBP18.91■□□□□ 0.62
SS18L1-205ENST00000492466 ELL2O00472 640 aaPredicted RBP18.9■□□□□ 0.62
SS18L1-205ENST00000492466 VEGFBP49765 207 aa18.9■□□□□ 0.62
SS18L1-205ENST00000492466 CXCL9Q07325 125 aa18.9■□□□□ 0.62
SS18L1-205ENST00000492466 GRAPQ13588 217 aa18.9■□□□□ 0.62
SS18L1-205ENST00000492466 NIM1KQ8IY84 436 aa18.9■□□□□ 0.62
SS18L1-205ENST00000492466 GRAPLQ8TC17 118 aaPredicted RBP18.9■□□□□ 0.62
SS18L1-205ENST00000492466 DDX60Q8IY21 1712 aaKnown RBP18.9■□□□□ 0.62
SS18L1-205ENST00000492466 IL16Q14005 1332 aa18.9■□□□□ 0.62
SS18L1-205ENST00000492466 FMR1Q06787 632 aaKnown RBP eCLIP18.89■□□□□ 0.61
SS18L1-205ENST00000492466 NCBP3Q53F19 620 aaKnown RBP18.89■□□□□ 0.61
SS18L1-205ENST00000492466 DDX46Q7L014 1031 aaKnown RBP18.89■□□□□ 0.61
SS18L1-205ENST00000492466 MPNDQ8N594 471 aa18.89■□□□□ 0.61
SS18L1-205ENST00000492466 ZNRF3Q9ULT6 936 aa18.89■□□□□ 0.61
SS18L1-205ENST00000492466 DUOX1Q9NRD9 1551 aa18.89■□□□□ 0.61
SS18L1-205ENST00000492466 COL4A1P02462 1669 aa18.89■□□□□ 0.61
SS18L1-205ENST00000492466 ATP5J2-PTCD1G3V325 749 aa18.88■□□□□ 0.61
SS18L1-205ENST00000492466 KIAA2012Q0VF49 1180 aa18.88■□□□□ 0.61
SS18L1-205ENST00000492466 TRIM28Q13263 835 aaKnown RBP18.88■□□□□ 0.61
SS18L1-205ENST00000492466 SF3B3Q15393 1217 aaKnown RBP18.88■□□□□ 0.61
SS18L1-205ENST00000492466 DPP8Q6V1X1 898 aaPredicted RBP18.88■□□□□ 0.61
SS18L1-205ENST00000492466 MIER1Q8N108 512 aa18.88■□□□□ 0.61
SS18L1-205ENST00000492466 SUPT20HQ8NEM7 779 aa18.88■□□□□ 0.61
SS18L1-205ENST00000492466 FAM89AQ96GI7 184 aa18.88■□□□□ 0.61
SS18L1-205ENST00000492466 HYPKQ9NX55 129 aa18.88■□□□□ 0.61
SS18L1-205ENST00000492466 RASSF10A6NK89 507 aa18.87■□□□□ 0.61
SS18L1-205ENST00000492466 LRRC37AA6NMS7 1700 aa18.87■□□□□ 0.61
SS18L1-205ENST00000492466 LMOD1P29536 600 aaPredicted RBP18.87■□□□□ 0.61
SS18L1-205ENST00000492466 USP50Q70EL3 339 aaPredicted RBP18.87■□□□□ 0.61
SS18L1-205ENST00000492466 WDR63Q8IWG1 891 aa18.87■□□□□ 0.61
SS18L1-205ENST00000492466 TNS4Q8IZW8 715 aa18.87■□□□□ 0.61
SS18L1-205ENST00000492466 CHMP4AQ9BY43 222 aa18.87■□□□□ 0.61
SS18L1-205ENST00000492466 TMX4Q9H1E5 349 aaPredicted RBP18.87■□□□□ 0.61
SS18L1-205ENST00000492466 GPRC5DQ9NZD1 345 aa18.87■□□□□ 0.61
SS18L1-205ENST00000492466 FANCIQ9NVI1 1328 aa18.86■□□□□ 0.61
SS18L1-205ENST00000492466 CELF1Q92879 486 aaKnown RBP18.86■□□□□ 0.61
SS18L1-205ENST00000492466 MYH16Q9H6N6 1097 aa18.86■□□□□ 0.61
SS18L1-205ENST00000492466 YDJCA8MPS7 323 aa18.85■□□□□ 0.61
SS18L1-205ENST00000492466 FOXN1O15353 648 aa18.85■□□□□ 0.61
SS18L1-205ENST00000492466 PHAXQ9H814 394 aaKnown RBP18.85■□□□□ 0.61
SS18L1-205ENST00000492466 DEFB115Q30KQ5 88 aa18.84■□□□□ 0.61
SS18L1-205ENST00000492466 CST9Q5W186 159 aa18.84■□□□□ 0.61
SS18L1-205ENST00000492466 TMC4Q7Z404 712 aa18.84■□□□□ 0.61
SS18L1-205ENST00000492466 C8orf58Q8NAV2 365 aa18.84■□□□□ 0.61
SS18L1-205ENST00000492466 STK31Q9BXU1 1019 aa18.84■□□□□ 0.61
SS18L1-205ENST00000492466 ADARB2Q9NS39 739 aaKnown RBP18.84■□□□□ 0.61
SS18L1-205ENST00000492466 TRAF5O00463 557 aa18.83■□□□□ 0.6
SS18L1-205ENST00000492466 GMPSP49915 693 aaPredicted RBP18.83■□□□□ 0.6
SS18L1-205ENST00000492466 GOLGA2Q08379 1002 aa18.83■□□□□ 0.6
SS18L1-205ENST00000492466 TWISTNBQ3B726 338 aaPredicted RBP18.83■□□□□ 0.6
SS18L1-205ENST00000492466 RTL5Q5HYW3 569 aaPredicted RBP18.83■□□□□ 0.6
SS18L1-205ENST00000492466 CCDC30Q5VVM6 783 aa18.83■□□□□ 0.6
SS18L1-205ENST00000492466 WBP1LQ9NX94 342 aa18.83■□□□□ 0.6
SS18L1-205ENST00000492466 PGAP2Q9UHJ9 254 aa18.83■□□□□ 0.6
SS18L1-205ENST00000492466 CACNA1FO60840 1977 aa18.82■□□□□ 0.6
SS18L1-205ENST00000492466 RAD17O75943 681 aa18.82■□□□□ 0.6
SS18L1-205ENST00000492466 HIRAP54198 1017 aaPredicted RBP18.82■□□□□ 0.6
SS18L1-205ENST00000492466 CIAPIN1Q6FI81 312 aa18.82■□□□□ 0.6
SS18L1-205ENST00000492466 IRS4O14654 1257 aaPredicted RBP18.81■□□□□ 0.6
SS18L1-205ENST00000492466 POLLQ9UGP5 575 aa18.81■□□□□ 0.6
SS18L1-205ENST00000492466 CDHR2Q9BYE9 1310 aa18.8■□□□□ 0.6
SS18L1-205ENST00000492466 SHTN1A0MZ66 631 aa18.8■□□□□ 0.6
SS18L1-205ENST00000492466 GPSM2P81274 684 aa18.8■□□□□ 0.6
SS18L1-205ENST00000492466 RIC3Q7Z5B4 369 aa18.8■□□□□ 0.6
SS18L1-205ENST00000492466 TSPYL6Q8N831 410 aa18.8■□□□□ 0.6
SS18L1-205ENST00000492466 ZBTB38Q8NAP3 1195 aaPredicted RBP18.8■□□□□ 0.6
SS18L1-205ENST00000492466 TRPM7Q96QT4 1865 aa18.8■□□□□ 0.6
SS18L1-205ENST00000492466 WDR33Q9C0J8 1336 aaKnown RBP18.79■□□□□ 0.6
SS18L1-205ENST00000492466 TNIP1Q15025 636 aa18.79■□□□□ 0.6
SS18L1-205ENST00000492466 PRDM10Q9NQV6 1147 aa18.79■□□□□ 0.6
SS18L1-205ENST00000492466 ABT1Q9ULW3 272 aaKnown RBP18.79■□□□□ 0.6
SS18L1-205ENST00000492466 NSFL1CQ9UNZ2 370 aaKnown RBP18.79■□□□□ 0.6
SS18L1-205ENST00000492466 RPS8P62241 208 aaKnown RBP18.78■□□□□ 0.6
SS18L1-205ENST00000492466 EXOSC9Q06265 439 aaKnown RBP18.78■□□□□ 0.6
SS18L1-205ENST00000492466 WASHC4Q2M389 1173 aa18.78■□□□□ 0.6
SS18L1-205ENST00000492466 TRPM4Q8TD43 1214 aa18.78■□□□□ 0.6
SS18L1-205ENST00000492466 SEC31BQ9NQW1 1179 aa18.78■□□□□ 0.6
SS18L1-205ENST00000492466 CAPN15O75808 1086 aa18.77■□□□□ 0.6
SS18L1-205ENST00000492466 DDX58O95786 925 aaKnown RBP18.77■□□□□ 0.6
SS18L1-205ENST00000492466 CCDC191Q8NCU4 936 aa18.77■□□□□ 0.6
SS18L1-205ENST00000492466 TBC1D16Q8TBP0 767 aa18.77■□□□□ 0.6
SS18L1-205ENST00000492466 ZC3H15Q8WU90 426 aaKnown RBP18.77■□□□□ 0.6
SS18L1-205ENST00000492466 MYD88Q99836 296 aa18.77■□□□□ 0.6
SS18L1-205ENST00000492466 GLIS2Q9BZE0 524 aaPredicted RBP18.77■□□□□ 0.6
SS18L1-205ENST00000492466 DBNDD1Q9H9R9 158 aa18.77■□□□□ 0.6
SS18L1-205ENST00000492466 KCNQ5Q9NR82 932 aa18.77■□□□□ 0.6
SS18L1-205ENST00000492466 CNOT7Q9UIV1 285 aaKnown RBP18.77■□□□□ 0.6
SS18L1-205ENST00000492466 ZBTB12Q9Y330 459 aaPredicted RBP18.77■□□□□ 0.6
SS18L1-205ENST00000492466 TLL2Q9Y6L7 1015 aa18.77■□□□□ 0.6
SS18L1-205ENST00000492466 THSD7BQ9C0I4 1608 aa18.76■□□□□ 0.59
SS18L1-205ENST00000492466 PSMD14O00487 310 aa18.76■□□□□ 0.59
SS18L1-205ENST00000492466 CTCFP49711 727 aaPredicted RBP18.76■□□□□ 0.59
SS18L1-205ENST00000492466 JARID2Q92833 1246 aaPredicted RBP18.76■□□□□ 0.59
SS18L1-205ENST00000492466 BCL2L13Q9BXK5 485 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms