RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 DHX40Q8IX18 779 aaKnown RBP11.29□□□□□ -0.6
VPS8-225ENST00000492449 CARD6Q9BX69 1037 aa11.29□□□□□ -0.6
VPS8-225ENST00000492449 CPSF1Q10570 1443 aaKnown RBP11.29□□□□□ -0.6
VPS8-225ENST00000492449 CTAGE5O15320 804 aa11.29□□□□□ -0.6
VPS8-225ENST00000492449 GIGYF1O75420 1035 aaPredicted RBP11.29□□□□□ -0.6
VPS8-225ENST00000492449 PARD6BQ9BYG5 372 aa11.29□□□□□ -0.6
VPS8-225ENST00000492449 BSDC1Q9NW68 430 aaPredicted RBP11.29□□□□□ -0.6
VPS8-225ENST00000492449 STAP2Q9UGK3 403 aa11.29□□□□□ -0.6
VPS8-225ENST00000492449 FRMPD1Q5SYB0 1578 aa11.29□□□□□ -0.6
VPS8-225ENST00000492449 TRHP20396 242 aaPredicted RBP11.28□□□□□ -0.6
VPS8-225ENST00000492449 GNAI1P63096 354 aa11.28□□□□□ -0.6
VPS8-225ENST00000492449 MAP3K9P80192 1104 aa11.28□□□□□ -0.6
VPS8-225ENST00000492449 FCHSD1Q86WN1 690 aa11.28□□□□□ -0.6
VPS8-225ENST00000492449 TSPYL6Q8N831 410 aa11.28□□□□□ -0.6
VPS8-225ENST00000492449 MPHOSPH8Q99549 860 aa11.28□□□□□ -0.6
VPS8-225ENST00000492449 VPS18Q9P253 973 aa11.28□□□□□ -0.6
VPS8-225ENST00000492449 AKAP2Q9Y2D5 859 aa11.28□□□□□ -0.6
VPS8-225ENST00000492449 SNX14Q9Y5W7 946 aa11.28□□□□□ -0.6
VPS8-225ENST00000492449 NRDCO43847 1150 aa11.28□□□□□ -0.6
VPS8-225ENST00000492449 EIF3JO75822 258 aaKnown RBP11.28□□□□□ -0.6
VPS8-225ENST00000492449 C11orf57Q6ZUT1 292 aaPredicted RBP11.28□□□□□ -0.6
VPS8-225ENST00000492449 FANCGO15287 622 aa11.28□□□□□ -0.6
VPS8-225ENST00000492449 HMMRO75330 724 aa11.28□□□□□ -0.6
VPS8-225ENST00000492449 FCHSD2O94868 740 aa11.28□□□□□ -0.6
VPS8-225ENST00000492449 HNRNPH1P31943 449 aaKnown RBP11.28□□□□□ -0.6
VPS8-225ENST00000492449 DDR1Q08345 913 aa11.28□□□□□ -0.6
VPS8-225ENST00000492449 CFAP70Q5T0N1 1121 aa11.28□□□□□ -0.6
VPS8-225ENST00000492449 VPS53Q5VIR6 699 aa11.28□□□□□ -0.6
VPS8-225ENST00000492449 CCDC30Q5VVM6 783 aa11.28□□□□□ -0.6
VPS8-225ENST00000492449 ARMCX5Q6P1M9 558 aa11.28□□□□□ -0.6
VPS8-225ENST00000492449 HYPKQ9NX55 129 aa11.28□□□□□ -0.6
VPS8-225ENST00000492449 NR1I2O75469 434 aa11.27□□□□□ -0.61
VPS8-225ENST00000492449 TXLNAP40222 546 aa11.27□□□□□ -0.61
VPS8-225ENST00000492449 HDXQ7Z353 690 aa11.27□□□□□ -0.61
VPS8-225ENST00000492449 FAM71BQ8TC56 605 aa11.27□□□□□ -0.61
VPS8-225ENST00000492449 KAT2BQ92831 832 aa11.27□□□□□ -0.61
VPS8-225ENST00000492449 MROH2AA6NES4 1674 aa11.27□□□□□ -0.61
VPS8-225ENST00000492449 KLHL33A6NCF5 533 aa11.27□□□□□ -0.61
VPS8-225ENST00000492449 ERLIN2O94905 339 aa11.27□□□□□ -0.61
VPS8-225ENST00000492449 KCNV1Q6PIU1 500 aa11.27□□□□□ -0.61
VPS8-225ENST00000492449 HOMEZQ8IX15 550 aa11.27□□□□□ -0.61
VPS8-225ENST00000492449 LEO1Q8WVC0 666 aaPredicted RBP11.27□□□□□ -0.61
VPS8-225ENST00000492449 TRAK1Q9UPV9 953 aa11.27□□□□□ -0.61
VPS8-225ENST00000492449 MRFAP1Q9Y605 127 aa11.27□□□□□ -0.61
VPS8-225ENST00000492449 IRF6O14896 467 aa11.26□□□□□ -0.61
VPS8-225ENST00000492449 ERCC3P19447 782 aa11.26□□□□□ -0.61
VPS8-225ENST00000492449 TWISTNBQ3B726 338 aaPredicted RBP11.26□□□□□ -0.61
VPS8-225ENST00000492449 BEND6Q5SZJ8 279 aaPredicted RBP11.26□□□□□ -0.61
VPS8-225ENST00000492449 GORABQ5T7V8 394 aa11.26□□□□□ -0.61
VPS8-225ENST00000492449 RAB21Q9UL25 225 aa11.26□□□□□ -0.61
VPS8-225ENST00000492449 URI1O94763 535 aaPredicted RBP11.26□□□□□ -0.61
VPS8-225ENST00000492449 NBPF6Q5VWK0 638 aa11.26□□□□□ -0.61
VPS8-225ENST00000492449 HOMER1Q86YM7 354 aa11.26□□□□□ -0.61
VPS8-225ENST00000492449 MICALL1Q8N3F8 863 aa11.26□□□□□ -0.61
VPS8-225ENST00000492449 GOLGA1Q92805 767 aa11.26□□□□□ -0.61
VPS8-225ENST00000492449 SPATA32Q96LK8 384 aa11.26□□□□□ -0.61
VPS8-225ENST00000492449 NBPF4Q96M43 638 aa11.26□□□□□ -0.61
VPS8-225ENST00000492449 PDE11AQ9HCR9 933 aa11.26□□□□□ -0.61
VPS8-225ENST00000492449 GNL3LQ9NVN8 582 aaKnown RBP11.26□□□□□ -0.61
VPS8-225ENST00000492449 ADCY9O60503 1353 aa11.26□□□□□ -0.61
VPS8-225ENST00000492449 KIF20BQ96Q89 1820 aa11.25□□□□□ -0.61
VPS8-225ENST00000492449 N4BP2Q86UW6 1770 aaPredicted RBP11.25□□□□□ -0.61
VPS8-225ENST00000492449 GOLGA6L4A6NEF3 574 aa11.25□□□□□ -0.61
VPS8-225ENST00000492449 POTEB2H3BUK9 544 aa11.25□□□□□ -0.61
VPS8-225ENST00000492449 LARGE1O95461 756 aa11.25□□□□□ -0.61
VPS8-225ENST00000492449 PDCP20941 246 aa11.25□□□□□ -0.61
VPS8-225ENST00000492449 SFPQP23246 707 aaKnown RBP eCLIP11.25□□□□□ -0.61
VPS8-225ENST00000492449 MNAT1P51948 309 aa11.25□□□□□ -0.61
VPS8-225ENST00000492449 MIEF2Q96C03 454 aa11.25□□□□□ -0.61
VPS8-225ENST00000492449 TULP4Q9NRJ4 1543 aa11.25□□□□□ -0.61
VPS8-225ENST00000492449 ATXN2Q99700 1313 aaKnown RBP11.25□□□□□ -0.61
VPS8-225ENST00000492449 TUBB4BP68371 445 aa11.25□□□□□ -0.61
VPS8-225ENST00000492449 ST3GAL1Q11201 340 aa11.25□□□□□ -0.61
VPS8-225ENST00000492449 NBPF10Q6P3W6 841 aaKnown RBP11.25□□□□□ -0.61
VPS8-225ENST00000492449 FAM212AQ96EL1 285 aa11.25□□□□□ -0.61
VPS8-225ENST00000492449 FAXDC2Q96IV6 333 aa11.25□□□□□ -0.61
VPS8-225ENST00000492449 ZFYVE9O95405 1425 aa11.25□□□□□ -0.61
VPS8-225ENST00000492449 BECN2A8MW95 431 aa11.25□□□□□ -0.61
VPS8-225ENST00000492449 PPP2R3AQ06190 1150 aa11.25□□□□□ -0.61
VPS8-225ENST00000492449 TMED8Q6PL24 325 aaPredicted RBP11.25□□□□□ -0.61
VPS8-225ENST00000492449 PGBD1Q96JS3 809 aa11.25□□□□□ -0.61
VPS8-225ENST00000492449 BPIFA3Q9BQP9 254 aa11.25□□□□□ -0.61
VPS8-225ENST00000492449 TM6SF1Q9BZW5 370 aa11.25□□□□□ -0.61
VPS8-225ENST00000492449 ANO10Q9NW15 660 aa11.25□□□□□ -0.61
VPS8-225ENST00000492449 ITSN1Q15811 1721 aa11.25□□□□□ -0.61
VPS8-225ENST00000492449 ABCC3O15438 1527 aa11.24□□□□□ -0.61
VPS8-225ENST00000492449 ARHGEF28Q8N1W1 1705 aaKnown RBP11.24□□□□□ -0.61
VPS8-225ENST00000492449 VPS37CA5D8V6 355 aaPredicted RBP11.24□□□□□ -0.61
VPS8-225ENST00000492449 CCDC83Q8IWF9 413 aa11.24□□□□□ -0.61
VPS8-225ENST00000492449 MBIPQ9NS73 344 aa11.24□□□□□ -0.61
VPS8-225ENST00000492449 PPP6R1Q9UPN7 881 aa11.24□□□□□ -0.61
VPS8-225ENST00000492449 FAN1Q9Y2M0 1017 aa11.24□□□□□ -0.61
VPS8-225ENST00000492449 ANKRD33BA6NCL7 494 aa11.24□□□□□ -0.61
VPS8-225ENST00000492449 HAP1P54257 671 aaPredicted RBP11.24□□□□□ -0.61
VPS8-225ENST00000492449 IRX1P78414 480 aaPredicted RBP11.24□□□□□ -0.61
VPS8-225ENST00000492449 POTEDQ86YR6 584 aa11.24□□□□□ -0.61
VPS8-225ENST00000492449 PRPF38AQ8NAV1 312 aaKnown RBP11.24□□□□□ -0.61
VPS8-225ENST00000492449 MSANTD4Q8NCY6 345 aa11.24□□□□□ -0.61
VPS8-225ENST00000492449 KCNB2Q92953 911 aa11.24□□□□□ -0.61
VPS8-225ENST00000492449 L1RE1Q9UN81 338 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms