RNA–Protein interactions for RNA: ENST00000492021.6

PDPK1-213, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 5

Gene PDPK1, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-213ENST00000492021 CCDC152Q4G0S7 254 aa24.35■■□□□ 1.49
PDPK1-213ENST00000492021 DDX46Q7L014 1031 aaKnown RBP24.34■■□□□ 1.49
PDPK1-213ENST00000492021 TTLL11Q8NHH1 800 aa24.34■■□□□ 1.49
PDPK1-213ENST00000492021 CSF1RP07333 972 aa24.33■■□□□ 1.49
PDPK1-213ENST00000492021 FOXO4P98177 505 aa24.33■■□□□ 1.49
PDPK1-213ENST00000492021 PDE3AQ14432 1141 aa24.33■■□□□ 1.49
PDPK1-213ENST00000492021 PRPF40BQ6NWY9 871 aaKnown RBP24.33■■□□□ 1.49
PDPK1-213ENST00000492021 PANK1Q8TE04 598 aa24.33■■□□□ 1.49
PDPK1-213ENST00000492021 SUCLG2Q96I99 432 aa24.33■■□□□ 1.49
PDPK1-213ENST00000492021 WWC3Q9ULE0 1092 aa24.33■■□□□ 1.49
PDPK1-213ENST00000492021 BCS1LQ9Y276 419 aa24.33■■□□□ 1.49
PDPK1-213ENST00000492021 UBTFL1P0CB47 393 aaPredicted RBP24.32■■□□□ 1.48
PDPK1-213ENST00000492021 YBX3P16989 372 aaKnown RBP eCLIP24.32■■□□□ 1.48
PDPK1-213ENST00000492021 RRP1P56182 461 aaKnown RBP24.32■■□□□ 1.48
PDPK1-213ENST00000492021 KAZALD1Q96I82 304 aa24.32■■□□□ 1.48
PDPK1-213ENST00000492021 MEIS3Q99687 375 aa24.32■■□□□ 1.48
PDPK1-213ENST00000492021 SLX4Q8IY92 1834 aa24.32■■□□□ 1.48
PDPK1-213ENST00000492021 GNAI3P08754 354 aa24.31■■□□□ 1.48
PDPK1-213ENST00000492021 GRAPQ13588 217 aa24.31■■□□□ 1.48
PDPK1-213ENST00000492021 CACNA1SQ13698 1873 aa24.31■■□□□ 1.48
PDPK1-213ENST00000492021 EPHA10Q5JZY3 1008 aa24.31■■□□□ 1.48
PDPK1-213ENST00000492021 ITPRIPQ8IWB1 547 aa24.31■■□□□ 1.48
PDPK1-213ENST00000492021 GRAPLQ8TC17 118 aaPredicted RBP24.31■■□□□ 1.48
PDPK1-213ENST00000492021 HDAC5Q9UQL6 1122 aa24.31■■□□□ 1.48
PDPK1-213ENST00000492021 GPR162Q16538 588 aa24.3■■□□□ 1.48
PDPK1-213ENST00000492021 RABL6Q3YEC7 729 aaPredicted RBP24.3■■□□□ 1.48
PDPK1-213ENST00000492021 PELP1Q8IZL8 1130 aaKnown RBP24.3■■□□□ 1.48
PDPK1-213ENST00000492021 C7orf43Q8WVR3 580 aa24.29■■□□□ 1.48
PDPK1-213ENST00000492021 GREM2Q9H772 168 aa24.29■■□□□ 1.48
PDPK1-213ENST00000492021 DCAF8L1A6NGE4 600 aa24.28■■□□□ 1.48
PDPK1-213ENST00000492021 BBOX1O75936 387 aa24.28■■□□□ 1.48
PDPK1-213ENST00000492021 MVPQ14764 893 aaKnown RBP24.28■■□□□ 1.48
PDPK1-213ENST00000492021 LMBR1LQ6UX01 489 aa24.28■■□□□ 1.48
PDPK1-213ENST00000492021 BICC1Q9H694 974 aaKnown RBP24.28■■□□□ 1.48
PDPK1-213ENST00000492021 COL4A1P02462 1669 aa24.27■■□□□ 1.48
PDPK1-213ENST00000492021 PPEF1O14829 653 aaPredicted RBP24.27■■□□□ 1.48
PDPK1-213ENST00000492021 GRIN3BO60391 1043 aa24.27■■□□□ 1.48
PDPK1-213ENST00000492021 FAM161AQ3B820 660 aa24.27■■□□□ 1.48
PDPK1-213ENST00000492021 SOGA3Q5TF21 947 aa24.27■■□□□ 1.48
PDPK1-213ENST00000492021 TMC4Q7Z404 712 aa24.27■■□□□ 1.48
PDPK1-213ENST00000492021 ANKRD44Q8N8A2 993 aa24.27■■□□□ 1.48
PDPK1-213ENST00000492021 CCDC85AQ96PX6 553 aaPredicted RBP24.27■■□□□ 1.48
PDPK1-213ENST00000492021 SEC31BQ9NQW1 1179 aa24.27■■□□□ 1.48
PDPK1-213ENST00000492021 C20orf194Q5TEA3 1177 aa24.26■■□□□ 1.47
PDPK1-213ENST00000492021 CELF1Q92879 486 aaKnown RBP24.26■■□□□ 1.47
PDPK1-213ENST00000492021 CDC5LQ99459 802 aaKnown RBP24.26■■□□□ 1.47
PDPK1-213ENST00000492021 LRRC37AA6NMS7 1700 aa24.25■■□□□ 1.47
PDPK1-213ENST00000492021 ZBTB7BO15156 539 aaPredicted RBP24.25■■□□□ 1.47
PDPK1-213ENST00000492021 ITGA6P23229 1130 aa24.25■■□□□ 1.47
PDPK1-213ENST00000492021 DDX19BQ9UMR2 479 aa24.25■■□□□ 1.47
PDPK1-213ENST00000492021 COG6Q9Y2V7 657 aa24.25■■□□□ 1.47
PDPK1-213ENST00000492021 LRRFIP2Q9Y608 721 aaKnown RBP24.25■■□□□ 1.47
PDPK1-213ENST00000492021 TAF1P21675 1872 aa24.25■■□□□ 1.47
PDPK1-213ENST00000492021 C21orf2O43822 256 aa24.24■■□□□ 1.47
PDPK1-213ENST00000492021 RPS8P62241 208 aaKnown RBP24.24■■□□□ 1.47
PDPK1-213ENST00000492021 CC2D2BQ6DHV5 1058 aa24.24■■□□□ 1.47
PDPK1-213ENST00000492021 ATP6V0A2Q9Y487 856 aa24.24■■□□□ 1.47
PDPK1-213ENST00000492021 GOLGB1Q14789 3259 aaKnown RBP24.24■■□□□ 1.47
PDPK1-213ENST00000492021 GNAI2P04899 355 aa24.23■■□□□ 1.47
PDPK1-213ENST00000492021 ANKRD18AQ8IVF6 992 aa24.23■■□□□ 1.47
PDPK1-213ENST00000492021 CHMP3Q9Y3E7 222 aa24.23■■□□□ 1.47
PDPK1-213ENST00000492021 SNED1Q8TER0 1413 aa24.23■■□□□ 1.47
PDPK1-213ENST00000492021 ANKRD18BA2A2Z9 1011 aa24.22■■□□□ 1.47
PDPK1-213ENST00000492021 IFIT5Q13325 482 aaKnown RBP24.22■■□□□ 1.47
PDPK1-213ENST00000492021 CCDC93Q567U6 631 aa24.22■■□□□ 1.47
PDPK1-213ENST00000492021 SP8Q8IXZ3 490 aa24.22■■□□□ 1.47
PDPK1-213ENST00000492021 ZNF219Q9P2Y4 722 aaPredicted RBP24.22■■□□□ 1.47
PDPK1-213ENST00000492021 CCDC57Q2TAC2 916 aa24.21■■□□□ 1.47
PDPK1-213ENST00000492021 GRIPAP1Q4V328 841 aa24.21■■□□□ 1.47
PDPK1-213ENST00000492021 CHMP4BQ9H444 224 aaKnown RBP24.21■■□□□ 1.47
PDPK1-213ENST00000492021 FER1L6Q2WGJ9 1857 aa24.2■■□□□ 1.46
PDPK1-213ENST00000492021 MTX1Q13505 466 aa24.2■■□□□ 1.46
PDPK1-213ENST00000492021 IGHMBP2P38935 993 aaKnown RBP24.19■■□□□ 1.46
PDPK1-213ENST00000492021 OLFM4Q6UX06 510 aa24.19■■□□□ 1.46
PDPK1-213ENST00000492021 RTKN2Q8IZC4 609 aa24.19■■□□□ 1.46
PDPK1-213ENST00000492021 TMX4Q9H1E5 349 aaPredicted RBP24.19■■□□□ 1.46
PDPK1-213ENST00000492021 BSDC1Q9NW68 430 aaPredicted RBP24.19■■□□□ 1.46
PDPK1-213ENST00000492021 LTBP3Q9NS15 1303 aa24.18■■□□□ 1.46
PDPK1-213ENST00000492021 ARHGAP27Q6ZUM4 889 aa24.18■■□□□ 1.46
PDPK1-213ENST00000492021 SUPT16HQ9Y5B9 1047 aaKnown RBP24.18■■□□□ 1.46
PDPK1-213ENST00000492021 SPEF2Q9C093 1822 aa24.18■■□□□ 1.46
PDPK1-213ENST00000492021 NFKBIEO00221 500 aa24.17■■□□□ 1.46
PDPK1-213ENST00000492021 SLC51AQ86UW1 340 aa24.17■■□□□ 1.46
PDPK1-213ENST00000492021 ZBTB40Q9NUA8 1239 aa24.17■■□□□ 1.46
PDPK1-213ENST00000492021 LTBP1Q14766 1721 aa24.16■■□□□ 1.46
PDPK1-213ENST00000492021 TAF7LQ5H9L4 462 aa24.16■■□□□ 1.46
PDPK1-213ENST00000492021 MPHOSPH8Q99549 860 aa24.16■■□□□ 1.46
PDPK1-213ENST00000492021 RFX5P48382 616 aaPredicted RBP24.15■■□□□ 1.46
PDPK1-213ENST00000492021 PSMD1Q99460 953 aa24.15■■□□□ 1.46
PDPK1-213ENST00000492021 FKBP4Q02790 459 aaKnown RBP eCLIP24.14■■□□□ 1.45
PDPK1-213ENST00000492021 TAOK3Q9H2K8 898 aa24.14■■□□□ 1.45
PDPK1-213ENST00000492021 C1orf115Q9H7X2 142 aa24.14■■□□□ 1.45
PDPK1-213ENST00000492021 DUOX1Q9NRD9 1551 aa24.14■■□□□ 1.45
PDPK1-213ENST00000492021 ZNF594Q96JF6 807 aaPredicted RBP24.13■■□□□ 1.45
PDPK1-213ENST00000492021 MINPP1Q9UNW1 487 aa24.13■■□□□ 1.45
PDPK1-213ENST00000492021 UTRNP46939 3433 aa24.12■■□□□ 1.45
PDPK1-213ENST00000492021 SRGAP3O43295 1099 aa24.12■■□□□ 1.45
PDPK1-213ENST00000492021 RASSF7Q02833 373 aa24.12■■□□□ 1.45
PDPK1-213ENST00000492021 DPP8Q6V1X1 898 aaPredicted RBP24.12■■□□□ 1.45
PDPK1-213ENST00000492021 LDHAL6AQ6ZMR3 332 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms