RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 CCDC88AQ3V6T2 1871 aa19.29■□□□□ 0.68
SS18L1-204ENST00000491916 TTLL11Q8NHH1 800 aa19.29■□□□□ 0.68
SS18L1-204ENST00000491916 CELF1Q92879 486 aaKnown RBP19.29■□□□□ 0.68
SS18L1-204ENST00000491916 SEC31BQ9NQW1 1179 aa19.29■□□□□ 0.68
SS18L1-204ENST00000491916 MYH3P11055 1940 aa19.29■□□□□ 0.68
SS18L1-204ENST00000491916 PPEF1O14829 653 aaPredicted RBP19.28■□□□□ 0.68
SS18L1-204ENST00000491916 BBOX1O75936 387 aa19.28■□□□□ 0.68
SS18L1-204ENST00000491916 CTSWP56202 376 aa19.28■□□□□ 0.68
SS18L1-204ENST00000491916 CCDC93Q567U6 631 aa19.28■□□□□ 0.68
SS18L1-204ENST00000491916 SOGA3Q5TF21 947 aa19.28■□□□□ 0.68
SS18L1-204ENST00000491916 C9orf131Q5VYM1 1079 aa19.28■□□□□ 0.68
SS18L1-204ENST00000491916 DDX46Q7L014 1031 aaKnown RBP19.28■□□□□ 0.68
SS18L1-204ENST00000491916 SRCIN1Q9C0H9 1055 aa19.28■□□□□ 0.68
SS18L1-204ENST00000491916 ATP6V0A2Q9Y487 856 aa19.28■□□□□ 0.68
SS18L1-204ENST00000491916 UTYO14607 1347 aa19.27■□□□□ 0.68
SS18L1-204ENST00000491916 GRM8O00222 908 aa19.27■□□□□ 0.68
SS18L1-204ENST00000491916 CSF1RP07333 972 aa19.27■□□□□ 0.68
SS18L1-204ENST00000491916 FOXO4P98177 505 aa19.27■□□□□ 0.68
SS18L1-204ENST00000491916 KAZALD1Q96I82 304 aa19.27■□□□□ 0.68
SS18L1-204ENST00000491916 HSP90B1P14625 803 aaKnown RBP19.26■□□□□ 0.67
SS18L1-204ENST00000491916 LMNB1P20700 586 aa19.26■□□□□ 0.67
SS18L1-204ENST00000491916 EPHA10Q5JZY3 1008 aa19.26■□□□□ 0.67
SS18L1-204ENST00000491916 ZNF784Q8NCA9 323 aaPredicted RBP19.26■□□□□ 0.67
SS18L1-204ENST00000491916 ARHGAP45Q92619 1136 aa19.26■□□□□ 0.67
SS18L1-204ENST00000491916 TNNQ9UQP3 1299 aa19.26■□□□□ 0.67
SS18L1-204ENST00000491916 LRRC37AA6NMS7 1700 aa19.25■□□□□ 0.67
SS18L1-204ENST00000491916 RTL9Q8NET4 1388 aa19.25■□□□□ 0.67
SS18L1-204ENST00000491916 NBPF7P0C2Y1 421 aaPredicted RBP19.25■□□□□ 0.67
SS18L1-204ENST00000491916 FKBP4Q02790 459 aaKnown RBP eCLIP19.25■□□□□ 0.67
SS18L1-204ENST00000491916 CCDC152Q4G0S7 254 aa19.25■□□□□ 0.67
SS18L1-204ENST00000491916 CC2D2BQ6DHV5 1058 aa19.25■□□□□ 0.67
SS18L1-204ENST00000491916 SP8Q8IXZ3 490 aa19.25■□□□□ 0.67
SS18L1-204ENST00000491916 RTKN2Q8IZC4 609 aa19.25■□□□□ 0.67
SS18L1-204ENST00000491916 CCDC85AQ96PX6 553 aaPredicted RBP19.25■□□□□ 0.67
SS18L1-204ENST00000491916 USP44Q9H0E7 712 aa19.25■□□□□ 0.67
SS18L1-204ENST00000491916 TAOK3Q9H2K8 898 aa19.25■□□□□ 0.67
SS18L1-204ENST00000491916 GREM2Q9H772 168 aa19.25■□□□□ 0.67
SS18L1-204ENST00000491916 RNF181Q9P0P0 153 aa19.25■□□□□ 0.67
SS18L1-204ENST00000491916 DICER1Q9UPY3 1922 aaKnown RBP19.25■□□□□ 0.67
SS18L1-204ENST00000491916 RPS8P62241 208 aaKnown RBP19.24■□□□□ 0.67
SS18L1-204ENST00000491916 PSMD1Q99460 953 aa19.24■□□□□ 0.67
SS18L1-204ENST00000491916 KIF16BQ96L93 1317 aa19.24■□□□□ 0.67
SS18L1-204ENST00000491916 API5Q9BZZ5 524 aaKnown RBP19.23■□□□□ 0.67
SS18L1-204ENST00000491916 COL4A5P29400 1685 aa19.23■□□□□ 0.67
SS18L1-204ENST00000491916 TRIM27P14373 513 aa19.22■□□□□ 0.67
SS18L1-204ENST00000491916 SUCLG2Q96I99 432 aa19.22■□□□□ 0.67
SS18L1-204ENST00000491916 RTFDC1Q9BY42 306 aaPredicted RBP19.22■□□□□ 0.67
SS18L1-204ENST00000491916 ZNF277Q9NRM2 450 aaPredicted RBP19.22■□□□□ 0.67
SS18L1-204ENST00000491916 DUOX1Q9NRD9 1551 aa19.22■□□□□ 0.67
SS18L1-204ENST00000491916 LTBP1Q14766 1721 aa19.22■□□□□ 0.67
SS18L1-204ENST00000491916 TMC4Q7Z404 712 aa19.21■□□□□ 0.67
SS18L1-204ENST00000491916 C9orf78Q9NZ63 289 aaPredicted RBP19.21■□□□□ 0.67
SS18L1-204ENST00000491916 FAM161AQ3B820 660 aa19.2■□□□□ 0.66
SS18L1-204ENST00000491916 GRIPAP1Q4V328 841 aa19.2■□□□□ 0.66
SS18L1-204ENST00000491916 INTS3Q68E01 1043 aaKnown RBP19.2■□□□□ 0.66
SS18L1-204ENST00000491916 ATF7IPQ6VMQ6 1270 aa19.2■□□□□ 0.66
SS18L1-204ENST00000491916 CCT4P50991 539 aaKnown RBP19.19■□□□□ 0.66
SS18L1-204ENST00000491916 ANKRD44Q8N8A2 993 aa19.19■□□□□ 0.66
SS18L1-204ENST00000491916 TIAM2Q8IVF5 1701 aa19.19■□□□□ 0.66
SS18L1-204ENST00000491916 ITGA6P23229 1130 aa19.18■□□□□ 0.66
SS18L1-204ENST00000491916 IARSP41252 1262 aaKnown RBP19.18■□□□□ 0.66
SS18L1-204ENST00000491916 GPSM2P81274 684 aa19.18■□□□□ 0.66
SS18L1-204ENST00000491916 RABL6Q3YEC7 729 aaPredicted RBP19.18■□□□□ 0.66
SS18L1-204ENST00000491916 LMBR1LQ6UX01 489 aa19.18■□□□□ 0.66
SS18L1-204ENST00000491916 FRAT1Q92837 279 aaPredicted RBP19.18■□□□□ 0.66
SS18L1-204ENST00000491916 ZC3H4Q9UPT8 1303 aaKnown RBP19.18■□□□□ 0.66
SS18L1-204ENST00000491916 IPO8O15397 1037 aaKnown RBP19.17■□□□□ 0.66
SS18L1-204ENST00000491916 ANKRD18AQ8IVF6 992 aa19.17■□□□□ 0.66
SS18L1-204ENST00000491916 MPNDQ8N594 471 aa19.17■□□□□ 0.66
SS18L1-204ENST00000491916 BSDC1Q9NW68 430 aaPredicted RBP19.17■□□□□ 0.66
SS18L1-204ENST00000491916 POLLQ9UGP5 575 aa19.17■□□□□ 0.66
SS18L1-204ENST00000491916 SPEF2Q9C093 1822 aa19.16■□□□□ 0.66
SS18L1-204ENST00000491916 CDC5LQ99459 802 aaKnown RBP19.16■□□□□ 0.66
SS18L1-204ENST00000491916 BICC1Q9H694 974 aaKnown RBP19.16■□□□□ 0.66
SS18L1-204ENST00000491916 PODXL2Q9NZ53 605 aa19.16■□□□□ 0.66
SS18L1-204ENST00000491916 WTIPA6NIX2 430 aaPredicted RBP19.15■□□□□ 0.66
SS18L1-204ENST00000491916 RLBP1P12271 317 aa19.15■□□□□ 0.66
SS18L1-204ENST00000491916 ZKSCAN2Q63HK3 967 aa19.15■□□□□ 0.66
SS18L1-204ENST00000491916 DPP8Q6V1X1 898 aaPredicted RBP19.15■□□□□ 0.66
SS18L1-204ENST00000491916 MINPP1Q9UNW1 487 aa19.15■□□□□ 0.66
SS18L1-204ENST00000491916 FZD9O00144 591 aa19.14■□□□□ 0.65
SS18L1-204ENST00000491916 CLUAP1Q96AJ1 413 aa19.14■□□□□ 0.65
SS18L1-204ENST00000491916 MEIS3Q99687 375 aa19.14■□□□□ 0.65
SS18L1-204ENST00000491916 GLTPD2A6NH11 291 aa19.13■□□□□ 0.65
SS18L1-204ENST00000491916 AOC3Q16853 763 aa19.13■□□□□ 0.65
SS18L1-204ENST00000491916 TMEM57Q8N5G2 664 aa19.13■□□□□ 0.65
SS18L1-204ENST00000491916 TBC1D16Q8TBP0 767 aa19.13■□□□□ 0.65
SS18L1-204ENST00000491916 ZNF526Q8TF50 670 aaPredicted RBP19.13■□□□□ 0.65
SS18L1-204ENST00000491916 VPS33BQ9H267 617 aa19.13■□□□□ 0.65
SS18L1-204ENST00000491916 NSFL1CQ9UNZ2 370 aaKnown RBP19.13■□□□□ 0.65
SS18L1-204ENST00000491916 ANKRD18BA2A2Z9 1011 aa19.12■□□□□ 0.65
SS18L1-204ENST00000491916 KIAA2012Q0VF49 1180 aa19.12■□□□□ 0.65
SS18L1-204ENST00000491916 IFIT5Q13325 482 aaKnown RBP19.12■□□□□ 0.65
SS18L1-204ENST00000491916 ZNF594Q96JF6 807 aaPredicted RBP19.12■□□□□ 0.65
SS18L1-204ENST00000491916 TMX4Q9H1E5 349 aaPredicted RBP19.12■□□□□ 0.65
SS18L1-204ENST00000491916 RCAN3Q9UKA8 241 aa19.12■□□□□ 0.65
SS18L1-204ENST00000491916 ZNF541Q9H0D2 1346 aa19.11■□□□□ 0.65
SS18L1-204ENST00000491916 POTECB2RU33 542 aa19.11■□□□□ 0.65
SS18L1-204ENST00000491916 SUPT20HQ8NEM7 779 aa19.11■□□□□ 0.65
SS18L1-204ENST00000491916 YTHDC1Q96MU7 727 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms