RNA–Protein interactions for RNA: ENST00000491769.1

COL6A3-212, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5

Gene COL6A3, Length 6,731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-212ENST00000491769 SREK1Q8WXA9 508 aaKnown RBP15.03■□□□□ -0
COL6A3-212ENST00000491769 GRPEL1Q9HAV7 217 aa15.03■□□□□ -0
COL6A3-212ENST00000491769 CCDC172P0C7W6 258 aa15.03■□□□□ -0
COL6A3-212ENST00000491769 NAA15Q9BXJ9 866 aaKnown RBP15.03■□□□□ -0
COL6A3-212ENST00000491769 SPDYE3A6NKU9 549 aa15.03■□□□□ -0
COL6A3-212ENST00000491769 NBPF7P0C2Y1 421 aaPredicted RBP15.03■□□□□ -0
COL6A3-212ENST00000491769 ANKRD13DQ6ZTN6 518 aa15.03■□□□□ -0
COL6A3-212ENST00000491769 PTPN14Q15678 1187 aa15.02■□□□□ -0
COL6A3-212ENST00000491769 ERICH4A6NGS2 130 aa15.02■□□□□ -0
COL6A3-212ENST00000491769 BACH1O14867 736 aa15.02■□□□□ -0
COL6A3-212ENST00000491769 TERF1P54274 439 aa15.02□□□□□ -0.01
COL6A3-212ENST00000491769 BIRC2Q13490 618 aa15.02□□□□□ -0.01
COL6A3-212ENST00000491769 SIRT1Q96EB6 747 aa15.02□□□□□ -0.01
COL6A3-212ENST00000491769 EYA3Q99504 573 aa15.02□□□□□ -0.01
COL6A3-212ENST00000491769 PYM1Q9BRP8 204 aaKnown RBP15.02□□□□□ -0.01
COL6A3-212ENST00000491769 DAPK1P53355 1430 aa15.02□□□□□ -0.01
COL6A3-212ENST00000491769 TROQ12816 1431 aaPredicted RBP15.02□□□□□ -0.01
COL6A3-212ENST00000491769 AKNAQ7Z591 1439 aa15.02□□□□□ -0.01
COL6A3-212ENST00000491769 PI4KAP2A4QPH2 592 aa15.02□□□□□ -0.01
COL6A3-212ENST00000491769 TPTE2Q6XPS3 522 aa15.02□□□□□ -0.01
COL6A3-212ENST00000491769 PI4KAP1Q8N8J0 262 aa15.02□□□□□ -0.01
COL6A3-212ENST00000491769 ECHDC1Q9NTX5 307 aa15.02□□□□□ -0.01
COL6A3-212ENST00000491769 JAG2Q9Y219 1238 aa15.02□□□□□ -0.01
COL6A3-212ENST00000491769 PROCA1Q8NCQ7 364 aaPredicted RBP15.02□□□□□ -0.01
COL6A3-212ENST00000491769 KRT23Q9C075 422 aa15.02□□□□□ -0.01
COL6A3-212ENST00000491769 KIF4AO95239 1232 aa15.01□□□□□ -0.01
COL6A3-212ENST00000491769 MCM3P25205 808 aa15.01□□□□□ -0.01
COL6A3-212ENST00000491769 STAT6P42226 847 aa15.01□□□□□ -0.01
COL6A3-212ENST00000491769 GPHNQ9NQX3 736 aaPredicted RBP15.01□□□□□ -0.01
COL6A3-212ENST00000491769 CLIP2Q9UDT6 1046 aa15.01□□□□□ -0.01
COL6A3-212ENST00000491769 NESP48681 1621 aa15.01□□□□□ -0.01
COL6A3-212ENST00000491769 UQCRHLA0A096LP55 91 aa15.01□□□□□ -0.01
COL6A3-212ENST00000491769 UQCRHP07919 91 aa15.01□□□□□ -0.01
COL6A3-212ENST00000491769 EEF2P13639 858 aaKnown RBP15.01□□□□□ -0.01
COL6A3-212ENST00000491769 CBX1P83916 185 aa15.01□□□□□ -0.01
COL6A3-212ENST00000491769 DZIP3Q86Y13 1208 aaKnown RBP15.01□□□□□ -0.01
COL6A3-212ENST00000491769 TMEM110-MUSTN1A8MSY1 372 aa15.01□□□□□ -0.01
COL6A3-212ENST00000491769 EHBP1L1Q8N3D4 1523 aa15.01□□□□□ -0.01
COL6A3-212ENST00000491769 FAM13AO94988 1023 aa15.01□□□□□ -0.01
COL6A3-212ENST00000491769 MAATS1Q7Z4T9 603 aa15.01□□□□□ -0.01
COL6A3-212ENST00000491769 SSH1Q8WYL5 1049 aa15.01□□□□□ -0.01
COL6A3-212ENST00000491769 ESR2Q92731 530 aa15□□□□□ -0.01
COL6A3-212ENST00000491769 PICK1Q9NRD5 415 aa15□□□□□ -0.01
COL6A3-212ENST00000491769 LIMCH1Q9UPQ0 1083 aa15□□□□□ -0.01
COL6A3-212ENST00000491769 SLC39A6Q13433 755 aa15□□□□□ -0.01
COL6A3-212ENST00000491769 KIAA0753Q2KHM9 967 aa15□□□□□ -0.01
COL6A3-212ENST00000491769 APBB1IPQ7Z5R6 666 aaPredicted RBP15□□□□□ -0.01
COL6A3-212ENST00000491769 TFIP11Q9UBB9 837 aaKnown RBP15□□□□□ -0.01
COL6A3-212ENST00000491769 ALDH1L2Q3SY69 923 aa15□□□□□ -0.01
COL6A3-212ENST00000491769 RNF187Q5TA31 235 aaPredicted RBP15□□□□□ -0.01
COL6A3-212ENST00000491769 NEK1Q96PY6 1258 aa15□□□□□ -0.01
COL6A3-212ENST00000491769 SPAG5Q96R06 1193 aa15□□□□□ -0.01
COL6A3-212ENST00000491769 MAGEB6P1A0A0J9YX57 407 aa15□□□□□ -0.01
COL6A3-212ENST00000491769 A0A1W2PRG0 241 aa15□□□□□ -0.01
COL6A3-212ENST00000491769 SLU7O95391 586 aaKnown RBP15□□□□□ -0.01
COL6A3-212ENST00000491769 GJB2P29033 226 aa15□□□□□ -0.01
COL6A3-212ENST00000491769 CCDC183Q5T5S1 534 aa15□□□□□ -0.01
COL6A3-212ENST00000491769 PKD2L1Q9P0L9 805 aa15□□□□□ -0.01
COL6A3-212ENST00000491769 AFMP43652 599 aa15□□□□□ -0.01
COL6A3-212ENST00000491769 TMOD4Q9NZQ9 345 aa15□□□□□ -0.01
COL6A3-212ENST00000491769 TTC21BQ7Z4L5 1316 aa15□□□□□ -0.01
COL6A3-212ENST00000491769 LPXNO60711 386 aa14.99□□□□□ -0.01
COL6A3-212ENST00000491769 CCDC175P0C221 793 aa14.99□□□□□ -0.01
COL6A3-212ENST00000491769 RRAGBQ5VZM2 374 aa14.99□□□□□ -0.01
COL6A3-212ENST00000491769 CABLES1Q8TDN4 633 aa14.99□□□□□ -0.01
COL6A3-212ENST00000491769 HECW1Q76N89 1606 aa14.99□□□□□ -0.01
COL6A3-212ENST00000491769 PRKG1Q13976 671 aa14.99□□□□□ -0.01
COL6A3-212ENST00000491769 JADE2Q9NQC1 790 aa14.99□□□□□ -0.01
COL6A3-212ENST00000491769 TMC6Q7Z403 805 aa14.99□□□□□ -0.01
COL6A3-212ENST00000491769 CTAGE5O15320 804 aa14.99□□□□□ -0.01
COL6A3-212ENST00000491769 GIMAP7Q8NHV1 300 aa14.99□□□□□ -0.01
COL6A3-212ENST00000491769 RBM17Q96I25 401 aaKnown RBP14.99□□□□□ -0.01
COL6A3-212ENST00000491769 IQCGQ9H095 443 aaKnown RBP14.99□□□□□ -0.01
COL6A3-212ENST00000491769 NPHP3Q7Z494 1330 aa14.99□□□□□ -0.01
COL6A3-212ENST00000491769 ACEP12821 1306 aa14.99□□□□□ -0.01
COL6A3-212ENST00000491769 MCM5P33992 734 aa14.99□□□□□ -0.01
COL6A3-212ENST00000491769 SPOUT1Q5T280 376 aaKnown RBP14.99□□□□□ -0.01
COL6A3-212ENST00000491769 TRMT1Q9NXH9 659 aaKnown RBP14.99□□□□□ -0.01
COL6A3-212ENST00000491769 ADGRL1O94910 1474 aa14.98□□□□□ -0.01
COL6A3-212ENST00000491769 KLF18A0A0U1RQI7 1052 aa14.98□□□□□ -0.01
COL6A3-212ENST00000491769 IFI16Q16666 785 aaKnown RBP14.98□□□□□ -0.01
COL6A3-212ENST00000491769 XAGE3Q8WTP9 111 aa14.98□□□□□ -0.01
COL6A3-212ENST00000491769 PIK3R4Q99570 1358 aa14.98□□□□□ -0.01
COL6A3-212ENST00000491769 GSTA5Q7RTV2 222 aa14.98□□□□□ -0.01
COL6A3-212ENST00000491769 CCDC63Q8NA47 563 aa14.98□□□□□ -0.01
COL6A3-212ENST00000491769 TTC12Q9H892 705 aaPredicted RBP14.98□□□□□ -0.01
COL6A3-212ENST00000491769 LMTK3Q96Q04 1460 aa14.98□□□□□ -0.01
COL6A3-212ENST00000491769 RTN1Q16799 776 aa14.98□□□□□ -0.01
COL6A3-212ENST00000491769 KANK3Q6NY19 840 aa14.98□□□□□ -0.01
COL6A3-212ENST00000491769 PTPRCP08575 1304 aa14.98□□□□□ -0.01
COL6A3-212ENST00000491769 PAIP2Q9BPZ3 127 aaKnown RBP14.98□□□□□ -0.01
COL6A3-212ENST00000491769 EAPPQ56P03 285 aaPredicted RBP14.98□□□□□ -0.01
COL6A3-212ENST00000491769 RRP36Q96EU6 259 aaKnown RBP14.98□□□□□ -0.01
COL6A3-212ENST00000491769 PLVAPQ9BX97 442 aa14.98□□□□□ -0.01
COL6A3-212ENST00000491769 RMND1Q9NWS8 449 aa14.98□□□□□ -0.01
COL6A3-212ENST00000491769 CAMSAP2Q08AD1 1489 aa14.98□□□□□ -0.01
COL6A3-212ENST00000491769 GNPATO15228 680 aa14.97□□□□□ -0.01
COL6A3-212ENST00000491769 SLFN5Q08AF3 891 aa14.97□□□□□ -0.01
COL6A3-212ENST00000491769 TSHZ3Q63HK5 1081 aa14.97□□□□□ -0.01
COL6A3-212ENST00000491769 ZBTB43O43298 467 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms