RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 PARP10Q53GL7 1025 aa17.51■□□□□ 0.39
USF1-206ENST00000491629 DLK2Q6UY11 383 aa17.51■□□□□ 0.39
USF1-206ENST00000491629 TRPM4Q8TD43 1214 aa17.51■□□□□ 0.39
USF1-206ENST00000491629 ZIC5Q96T25 663 aa17.51■□□□□ 0.39
USF1-206ENST00000491629 VPS33BQ9H267 617 aa17.51■□□□□ 0.39
USF1-206ENST00000491629 SCN9AQ15858 1988 aa17.5■□□□□ 0.39
USF1-206ENST00000491629 HCLS1P14317 486 aaPredicted RBP17.5■□□□□ 0.39
USF1-206ENST00000491629 KIAA2012Q0VF49 1180 aa17.5■□□□□ 0.39
USF1-206ENST00000491629 UTP14AQ9BVJ6 771 aaKnown RBP17.5■□□□□ 0.39
USF1-206ENST00000491629 RAD17O75943 681 aa17.49■□□□□ 0.39
USF1-206ENST00000491629 SP8Q8IXZ3 490 aa17.49■□□□□ 0.39
USF1-206ENST00000491629 BEGAINQ9BUH8 593 aa17.49■□□□□ 0.39
USF1-206ENST00000491629 EIF2S2P20042 333 aaKnown RBP17.48■□□□□ 0.39
USF1-206ENST00000491629 CIAPIN1Q6FI81 312 aa17.48■□□□□ 0.39
USF1-206ENST00000491629 NLRP10Q86W26 655 aa17.48■□□□□ 0.39
USF1-206ENST00000491629 HHIPL1Q96JK4 782 aa17.48■□□□□ 0.39
USF1-206ENST00000491629 MCOLN1Q9GZU1 580 aa17.48■□□□□ 0.39
USF1-206ENST00000491629 AKAP11Q9UKA4 1901 aa17.48■□□□□ 0.39
USF1-206ENST00000491629 BBOX1O75936 387 aa17.47■□□□□ 0.39
USF1-206ENST00000491629 MLLT1Q03111 559 aaPredicted RBP17.47■□□□□ 0.39
USF1-206ENST00000491629 DPP8Q6V1X1 898 aaPredicted RBP17.47■□□□□ 0.39
USF1-206ENST00000491629 MPNDQ8N594 471 aa17.47■□□□□ 0.39
USF1-206ENST00000491629 CDHR2Q9BYE9 1310 aa17.47■□□□□ 0.39
USF1-206ENST00000491629 BRPF1P55201 1214 aaPredicted RBP17.46■□□□□ 0.39
USF1-206ENST00000491629 SUPT20HQ8NEM7 779 aa17.46■□□□□ 0.39
USF1-206ENST00000491629 ZC3H15Q8WU90 426 aaKnown RBP17.46■□□□□ 0.39
USF1-206ENST00000491629 ZNF428Q96B54 188 aa17.46■□□□□ 0.39
USF1-206ENST00000491629 CNOT7Q9UIV1 285 aaKnown RBP17.46■□□□□ 0.39
USF1-206ENST00000491629 TSPYL4Q9UJ04 414 aa17.46■□□□□ 0.39
USF1-206ENST00000491629 EGFRP00533 1210 aa17.45■□□□□ 0.38
USF1-206ENST00000491629 COPS6Q7L5N1 327 aa17.45■□□□□ 0.38
USF1-206ENST00000491629 ZNF408Q9H9D4 720 aa17.45■□□□□ 0.38
USF1-206ENST00000491629 GRAPQ13588 217 aa17.44■□□□□ 0.38
USF1-206ENST00000491629 USP48Q86UV5 1035 aa17.44■□□□□ 0.38
USF1-206ENST00000491629 GRAPLQ8TC17 118 aaPredicted RBP17.44■□□□□ 0.38
USF1-206ENST00000491629 XAGE3Q8WTP9 111 aa17.44■□□□□ 0.38
USF1-206ENST00000491629 NECTIN2Q92692 538 aa17.44■□□□□ 0.38
USF1-206ENST00000491629 BCL2L13Q9BXK5 485 aa17.44■□□□□ 0.38
USF1-206ENST00000491629 ZBTB12Q9Y330 459 aaPredicted RBP17.44■□□□□ 0.38
USF1-206ENST00000491629 PSME4Q14997 1843 aa17.44■□□□□ 0.38
USF1-206ENST00000491629 CA12O43570 354 aa17.43■□□□□ 0.38
USF1-206ENST00000491629 NEFMP07197 916 aa17.43■□□□□ 0.38
USF1-206ENST00000491629 AIMP1Q12904 312 aaKnown RBP17.43■□□□□ 0.38
USF1-206ENST00000491629 TCIRG1Q13488 830 aa17.43■□□□□ 0.38
USF1-206ENST00000491629 TNIP1Q15025 636 aa17.43■□□□□ 0.38
USF1-206ENST00000491629 KRT24Q2M2I5 525 aa17.43■□□□□ 0.38
USF1-206ENST00000491629 CDC37L1Q7L3B6 337 aa17.43■□□□□ 0.38
USF1-206ENST00000491629 SAMD7Q7Z3H4 446 aa17.43■□□□□ 0.38
USF1-206ENST00000491629 MICALL2Q8IY33 904 aa17.43■□□□□ 0.38
USF1-206ENST00000491629 DDX46Q7L014 1031 aaKnown RBP17.42■□□□□ 0.38
USF1-206ENST00000491629 TMX4Q9H1E5 349 aaPredicted RBP17.42■□□□□ 0.38
USF1-206ENST00000491629 KCNQ5Q9NR82 932 aa17.42■□□□□ 0.38
USF1-206ENST00000491629 TRMT112Q9UI30 125 aaKnown RBP17.42■□□□□ 0.38
USF1-206ENST00000491629 FAM155AB1AL88 458 aaPredicted RBP17.41■□□□□ 0.38
USF1-206ENST00000491629 PSMD14O00487 310 aa17.41■□□□□ 0.38
USF1-206ENST00000491629 SH3TC1Q8TE82 1336 aa17.41■□□□□ 0.38
USF1-206ENST00000491629 RTL9Q8NET4 1388 aa17.4■□□□□ 0.38
USF1-206ENST00000491629 HUNKP57058 714 aa17.4■□□□□ 0.38
USF1-206ENST00000491629 RIPK4P57078 832 aa17.4■□□□□ 0.38
USF1-206ENST00000491629 DGKZQ13574 1117 aa17.4■□□□□ 0.38
USF1-206ENST00000491629 CELF1Q92879 486 aaKnown RBP17.4■□□□□ 0.38
USF1-206ENST00000491629 DBNDD1Q9H9R9 158 aa17.4■□□□□ 0.38
USF1-206ENST00000491629 POLLQ9UGP5 575 aa17.4■□□□□ 0.38
USF1-206ENST00000491629 MAPK8IP3Q9UPT6 1336 aa17.4■□□□□ 0.38
USF1-206ENST00000491629 H7C1D1 291 aa17.39■□□□□ 0.37
USF1-206ENST00000491629 NOGQ13253 232 aa17.39■□□□□ 0.37
USF1-206ENST00000491629 TBC1D10BQ4KMP7 808 aaPredicted RBP17.39■□□□□ 0.37
USF1-206ENST00000491629 HSP90AB3PQ58FF7 597 aa17.39■□□□□ 0.37
USF1-206ENST00000491629 DPF2Q92785 391 aa17.39■□□□□ 0.37
USF1-206ENST00000491629 BABAM1Q9NWV8 329 aa17.39■□□□□ 0.37
USF1-206ENST00000491629 ZNF646O15015 1829 aaPredicted RBP17.38■□□□□ 0.37
USF1-206ENST00000491629 ADM5C9JUS6 153 aa17.38■□□□□ 0.37
USF1-206ENST00000491629 RIMBP2O15034 1052 aa17.37■□□□□ 0.37
USF1-206ENST00000491629 TMPOP42166 694 aaKnown RBP17.37■□□□□ 0.37
USF1-206ENST00000491629 GPSM2P81274 684 aa17.37■□□□□ 0.37
USF1-206ENST00000491629 WASHC4Q2M389 1173 aa17.37■□□□□ 0.37
USF1-206ENST00000491629 ISCA1Q9BUE6 129 aa17.37■□□□□ 0.37
USF1-206ENST00000491629 CHPF2Q9P2E5 772 aa17.37■□□□□ 0.37
USF1-206ENST00000491629 SF3B3Q15393 1217 aaKnown RBP17.36■□□□□ 0.37
USF1-206ENST00000491629 RGMBQ6NW40 437 aa17.36■□□□□ 0.37
USF1-206ENST00000491629 KRT26Q7Z3Y9 468 aa17.36■□□□□ 0.37
USF1-206ENST00000491629 TMC4Q7Z404 712 aa17.36■□□□□ 0.37
USF1-206ENST00000491629 FAM89AQ96GI7 184 aa17.36■□□□□ 0.37
USF1-206ENST00000491629 CFAP44Q96MT7 982 aa17.36■□□□□ 0.37
USF1-206ENST00000491629 NSFL1CQ9UNZ2 370 aaKnown RBP17.36■□□□□ 0.37
USF1-206ENST00000491629 ASTN2O75129 1339 aaPredicted RBP17.36■□□□□ 0.37
USF1-206ENST00000491629 CHL1O00533 1208 aa17.35■□□□□ 0.37
USF1-206ENST00000491629 ECE2O60344 883 aa17.35■□□□□ 0.37
USF1-206ENST00000491629 DOK7Q18PE1 504 aa17.35■□□□□ 0.37
USF1-206ENST00000491629 PNNQ9H307 717 aaKnown RBP17.35■□□□□ 0.37
USF1-206ENST00000491629 GBA2Q9HCG7 927 aaPredicted RBP17.35■□□□□ 0.37
USF1-206ENST00000491629 ATP5J2-PTCD1G3V325 749 aa17.34■□□□□ 0.37
USF1-206ENST00000491629 KIF23Q02241 960 aaPredicted RBP17.34■□□□□ 0.37
USF1-206ENST00000491629 RBM26Q5T8P6 1007 aaKnown RBP17.34■□□□□ 0.37
USF1-206ENST00000491629 RTL5Q5HYW3 569 aaPredicted RBP17.33■□□□□ 0.36
USF1-206ENST00000491629 PLBD2Q8NHP8 589 aa17.33■□□□□ 0.36
USF1-206ENST00000491629 TBC1D16Q8TBP0 767 aa17.33■□□□□ 0.36
USF1-206ENST00000491629 RNF186Q9NXI6 227 aa17.33■□□□□ 0.36
USF1-206ENST00000491629 TRIM35Q9UPQ4 493 aa17.33■□□□□ 0.36
USF1-206ENST00000491629 SPEF2Q9C093 1822 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms