RNA–Protein interactions for RNA: ENST00000491311.1

CDK11A-219, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-219ENST00000491311 NLRP3Q96P20 1036 aa18.93■□□□□ 0.62
CDK11A-219ENST00000491311 PPP1R1BQ9UD71 204 aaPredicted RBP18.93■□□□□ 0.62
CDK11A-219ENST00000491311 KIAA1551Q9HCM1 1747 aa18.92■□□□□ 0.62
CDK11A-219ENST00000491311 DLEC1Q9Y238 1755 aa18.92■□□□□ 0.62
CDK11A-219ENST00000491311 HSP90B1P14625 803 aaKnown RBP18.92■□□□□ 0.62
CDK11A-219ENST00000491311 TTLL11Q8NHH1 800 aa18.92■□□□□ 0.62
CDK11A-219ENST00000491311 GREM2Q9H772 168 aa18.92■□□□□ 0.62
CDK11A-219ENST00000491311 SRGAP3O43295 1099 aa18.91■□□□□ 0.62
CDK11A-219ENST00000491311 RABL6Q3YEC7 729 aaPredicted RBP18.91■□□□□ 0.62
CDK11A-219ENST00000491311 SIRT2Q8IXJ6 389 aa18.9■□□□□ 0.62
CDK11A-219ENST00000491311 BRIP1Q9BX63 1249 aa18.9■□□□□ 0.62
CDK11A-219ENST00000491311 SEC31BQ9NQW1 1179 aa18.9■□□□□ 0.62
CDK11A-219ENST00000491311 GTF3C3Q9Y5Q9 886 aa18.9■□□□□ 0.62
CDK11A-219ENST00000491311 CSF1RP07333 972 aa18.89■□□□□ 0.61
CDK11A-219ENST00000491311 CHRNA5P30532 468 aa18.89■□□□□ 0.61
CDK11A-219ENST00000491311 ATP8B2P98198 1209 aa18.89■□□□□ 0.61
CDK11A-219ENST00000491311 AAMPQ13685 434 aa18.89■□□□□ 0.61
CDK11A-219ENST00000491311 CCDC152Q4G0S7 254 aa18.89■□□□□ 0.61
CDK11A-219ENST00000491311 KLHDC4Q8TBB5 520 aa18.89■□□□□ 0.61
CDK11A-219ENST00000491311 RPGRQ92834 1020 aaKnown RBP18.89■□□□□ 0.61
CDK11A-219ENST00000491311 ITGA6P23229 1130 aa18.88■□□□□ 0.61
CDK11A-219ENST00000491311 PDE6BP35913 854 aa18.88■□□□□ 0.61
CDK11A-219ENST00000491311 SF3B3Q15393 1217 aaKnown RBP18.88■□□□□ 0.61
CDK11A-219ENST00000491311 C2CD5Q86YS7 1000 aa18.88■□□□□ 0.61
CDK11A-219ENST00000491311 RPAP2Q8IXW5 612 aaPredicted RBP18.88■□□□□ 0.61
CDK11A-219ENST00000491311 ZNF594Q96JF6 807 aaPredicted RBP18.88■□□□□ 0.61
CDK11A-219ENST00000491311 PA2G4Q9UQ80 394 aaKnown RBP18.88■□□□□ 0.61
CDK11A-219ENST00000491311 IFIT5Q13325 482 aaKnown RBP18.87■□□□□ 0.61
CDK11A-219ENST00000491311 MTX1Q13505 466 aa18.87■□□□□ 0.61
CDK11A-219ENST00000491311 CCDC57Q2TAC2 916 aa18.87■□□□□ 0.61
CDK11A-219ENST00000491311 TAF7LQ5H9L4 462 aa18.87■□□□□ 0.61
CDK11A-219ENST00000491311 A0A1B0GUL6 1792 aa18.86■□□□□ 0.61
CDK11A-219ENST00000491311 LRP5O75197 1615 aa18.86■□□□□ 0.61
CDK11A-219ENST00000491311 ANKRD18BA2A2Z9 1011 aa18.86■□□□□ 0.61
CDK11A-219ENST00000491311 POLA2Q14181 598 aa18.86■□□□□ 0.61
CDK11A-219ENST00000491311 DDX46Q7L014 1031 aaKnown RBP18.86■□□□□ 0.61
CDK11A-219ENST00000491311 SIL1Q9H173 461 aa18.86■□□□□ 0.61
CDK11A-219ENST00000491311 HMMRO75330 724 aa18.85■□□□□ 0.61
CDK11A-219ENST00000491311 RFX5P48382 616 aaPredicted RBP18.85■□□□□ 0.61
CDK11A-219ENST00000491311 CRY2Q49AN0 593 aa18.85■□□□□ 0.61
CDK11A-219ENST00000491311 B4GALNT3Q6L9W6 998 aa18.85■□□□□ 0.61
CDK11A-219ENST00000491311 SSH3Q8TE77 659 aa18.85■□□□□ 0.61
CDK11A-219ENST00000491311 ZNF622Q969S3 477 aaKnown RBP eCLIP18.85■□□□□ 0.612e-6■■■■□ 20.6
CDK11A-219ENST00000491311 WWC3Q9ULE0 1092 aa18.85■□□□□ 0.61
CDK11A-219ENST00000491311 BRCA1P38398 1863 aaKnown RBP18.84■□□□□ 0.61
CDK11A-219ENST00000491311 RTL9Q8NET4 1388 aa18.84■□□□□ 0.61
CDK11A-219ENST00000491311 SLX4Q8IY92 1834 aa18.84■□□□□ 0.61
CDK11A-219ENST00000491311 A0A0G2JLW4 131 aa18.84■□□□□ 0.61
CDK11A-219ENST00000491311 H0YIN7 160 aa18.84■□□□□ 0.61
CDK11A-219ENST00000491311 IGHDP01880 384 aa18.84■□□□□ 0.61
CDK11A-219ENST00000491311 SRGNP10124 158 aa18.84■□□□□ 0.61
CDK11A-219ENST00000491311 ERICH6BQ5W0A0 696 aa18.84■□□□□ 0.61
CDK11A-219ENST00000491311 SLC51AQ86UW1 340 aa18.84■□□□□ 0.61
CDK11A-219ENST00000491311 CELF1Q92879 486 aaKnown RBP18.84■□□□□ 0.61
CDK11A-219ENST00000491311 RBM17Q96I25 401 aaKnown RBP18.84■□□□□ 0.61
CDK11A-219ENST00000491311 CCDC136Q96JN2 1154 aa18.84■□□□□ 0.61
CDK11A-219ENST00000491311 PPP4R2Q9NY27 417 aa18.84■□□□□ 0.61
CDK11A-219ENST00000491311 KLRG2A4D1S0 409 aaPredicted RBP18.83■□□□□ 0.6
CDK11A-219ENST00000491311 APBB1O00213 710 aa18.83■□□□□ 0.6
CDK11A-219ENST00000491311 NPR1P16066 1061 aa18.83■□□□□ 0.6
CDK11A-219ENST00000491311 DPEP1P16444 411 aa18.83■□□□□ 0.6
CDK11A-219ENST00000491311 EXOC6BQ9Y2D4 811 aa18.83■□□□□ 0.6
CDK11A-219ENST00000491311 SURF6O75683 361 aaKnown RBP18.82■□□□□ 0.6
CDK11A-219ENST00000491311 PTPN12Q05209 780 aaKnown RBP18.82■□□□□ 0.6
CDK11A-219ENST00000491311 ANKRD18AQ8IVF6 992 aa18.82■□□□□ 0.6
CDK11A-219ENST00000491311 NLGN2Q8NFZ4 835 aa18.82■□□□□ 0.6
CDK11A-219ENST00000491311 MASTLQ96GX5 879 aa18.82■□□□□ 0.6
CDK11A-219ENST00000491311 CDC5LQ99459 802 aaKnown RBP18.82■□□□□ 0.6
CDK11A-219ENST00000491311 PUS3Q9BZE2 481 aaKnown RBP18.82■□□□□ 0.6
CDK11A-219ENST00000491311 BCL11AQ9H165 835 aa18.82■□□□□ 0.6
CDK11A-219ENST00000491311 RWDD1Q9H446 243 aaPredicted RBP18.82■□□□□ 0.6
CDK11A-219ENST00000491311 SRCAPQ6ZRS2 3230 aa18.81■□□□□ 0.6
CDK11A-219ENST00000491311 IGHMBP2P38935 993 aaKnown RBP18.81■□□□□ 0.6
CDK11A-219ENST00000491311 OS9Q13438 667 aaPredicted RBP18.81■□□□□ 0.6
CDK11A-219ENST00000491311 HDAC1Q13547 482 aaPredicted RBP18.81■□□□□ 0.6
CDK11A-219ENST00000491311 GRAPQ13588 217 aa18.81■□□□□ 0.6
CDK11A-219ENST00000491311 LRRC24Q50LG9 513 aa18.81■□□□□ 0.6
CDK11A-219ENST00000491311 GRAPLQ8TC17 118 aaPredicted RBP18.81■□□□□ 0.6
CDK11A-219ENST00000491311 FHDC1Q9C0D6 1143 aaPredicted RBP18.81■□□□□ 0.6
CDK11A-219ENST00000491311 LRRC37AA6NMS7 1700 aa18.8■□□□□ 0.6
CDK11A-219ENST00000491311 HOXA10P31260 410 aaPredicted RBP18.8■□□□□ 0.6
CDK11A-219ENST00000491311 MPHOSPH8Q99549 860 aa18.8■□□□□ 0.6
CDK11A-219ENST00000491311 CNNM1Q9NRU3 951 aa18.8■□□□□ 0.6
CDK11A-219ENST00000491311 ZNF219Q9P2Y4 722 aaPredicted RBP18.8■□□□□ 0.6
CDK11A-219ENST00000491311 CD2APQ9Y5K6 639 aa18.8■□□□□ 0.6
CDK11A-219ENST00000491311 RPS8P62241 208 aaKnown RBP18.79■□□□□ 0.6
CDK11A-219ENST00000491311 STYK1Q6J9G0 422 aa18.79■□□□□ 0.6
CDK11A-219ENST00000491311 LDHAL6AQ6ZMR3 332 aa18.79■□□□□ 0.6
CDK11A-219ENST00000491311 CRAMP1Q96RY5 1269 aa18.79■□□□□ 0.6
CDK11A-219ENST00000491311 COPRSQ9NQ92 184 aa18.79■□□□□ 0.6
CDK11A-219ENST00000491311 PPEF1O14829 653 aaPredicted RBP18.78■□□□□ 0.6
CDK11A-219ENST00000491311 TGFB2P61812 414 aa18.78■□□□□ 0.6
CDK11A-219ENST00000491311 G3BP1Q13283 466 aaKnown RBP eCLIP18.78■□□□□ 0.6
CDK11A-219ENST00000491311 PDZRN3Q9UPQ7 1066 aa18.78■□□□□ 0.6
CDK11A-219ENST00000491311 EYA2O00167 538 aa18.77■□□□□ 0.6
CDK11A-219ENST00000491311 KCNA3P22001 575 aa18.77■□□□□ 0.6
CDK11A-219ENST00000491311 PRPF40BQ6NWY9 871 aaKnown RBP18.77■□□□□ 0.6
CDK11A-219ENST00000491311 HELBQ8NG08 1087 aaPredicted RBP18.77■□□□□ 0.6
CDK11A-219ENST00000491311 DCTPP1Q9H773 170 aa18.77■□□□□ 0.6
CDK11A-219ENST00000491311 ALDH1B1P30837 517 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms