RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 ANXA1P04083 346 aa27.12■■□□□ 1.93
CLIP2-208ENST00000491075 HHIPL1Q96JK4 782 aa27.12■■□□□ 1.93
CLIP2-208ENST00000491075 PGAP2Q9UHJ9 254 aa27.12■■□□□ 1.93
CLIP2-208ENST00000491075 TAF1P21675 1872 aa27.12■■□□□ 1.93
CLIP2-208ENST00000491075 TNIP1Q15025 636 aa27.11■■□□□ 1.93
CLIP2-208ENST00000491075 DDX46Q7L014 1031 aaKnown RBP27.11■■□□□ 1.93
CLIP2-208ENST00000491075 NLRP10Q86W26 655 aa27.11■■□□□ 1.93
CLIP2-208ENST00000491075 ZC3H15Q8WU90 426 aaKnown RBP27.11■■□□□ 1.93
CLIP2-208ENST00000491075 DUOX1Q9NRD9 1551 aa27.1■■□□□ 1.93
CLIP2-208ENST00000491075 CA12O43570 354 aa27.1■■□□□ 1.93
CLIP2-208ENST00000491075 HCLS1P14317 486 aaPredicted RBP27.1■■□□□ 1.93
CLIP2-208ENST00000491075 BCL2L13Q9BXK5 485 aa27.1■■□□□ 1.93
CLIP2-208ENST00000491075 GLIS2Q9BZE0 524 aaPredicted RBP27.1■■□□□ 1.93
CLIP2-208ENST00000491075 AOC2O75106 756 aa27.09■■□□□ 1.93
CLIP2-208ENST00000491075 RIPK4P57078 832 aa27.09■■□□□ 1.93
CLIP2-208ENST00000491075 LMOD3Q0VAK6 560 aa27.09■■□□□ 1.93
CLIP2-208ENST00000491075 GRAPQ13588 217 aa27.09■■□□□ 1.93
CLIP2-208ENST00000491075 COPS6Q7L5N1 327 aa27.09■■□□□ 1.93
CLIP2-208ENST00000491075 GRAPLQ8TC17 118 aaPredicted RBP27.09■■□□□ 1.93
CLIP2-208ENST00000491075 DDX60Q8IY21 1712 aaKnown RBP27.09■■□□□ 1.93
CLIP2-208ENST00000491075 SH3TC1Q8TE82 1336 aa27.09■■□□□ 1.93
CLIP2-208ENST00000491075 RAD17O75943 681 aa27.08■■□□□ 1.93
CLIP2-208ENST00000491075 FAM161AQ3B820 660 aa27.08■■□□□ 1.93
CLIP2-208ENST00000491075 TMC4Q7Z404 712 aa27.08■■□□□ 1.93
CLIP2-208ENST00000491075 XAGE3Q8WTP9 111 aa27.08■■□□□ 1.93
CLIP2-208ENST00000491075 TRMT112Q9UI30 125 aaKnown RBP27.08■■□□□ 1.93
CLIP2-208ENST00000491075 AIMP1Q12904 312 aaKnown RBP27.07■■□□□ 1.92
CLIP2-208ENST00000491075 TCIRG1Q13488 830 aa27.07■■□□□ 1.92
CLIP2-208ENST00000491075 BRPF1P55201 1214 aaPredicted RBP27.06■■□□□ 1.92
CLIP2-208ENST00000491075 TSKSQ9UJT2 592 aa27.06■■□□□ 1.92
CLIP2-208ENST00000491075 HIRAP54198 1017 aaPredicted RBP27.05■■□□□ 1.92
CLIP2-208ENST00000491075 CDC37L1Q7L3B6 337 aa27.05■■□□□ 1.92
CLIP2-208ENST00000491075 TRPM4Q8TD43 1214 aa27.05■■□□□ 1.92
CLIP2-208ENST00000491075 NECTIN2Q92692 538 aa27.05■■□□□ 1.92
CLIP2-208ENST00000491075 CCDC85CA6NKD9 419 aa27.04■■□□□ 1.92
CLIP2-208ENST00000491075 ZNF408Q9H9D4 720 aa27.04■■□□□ 1.92
CLIP2-208ENST00000491075 CNOT7Q9UIV1 285 aaKnown RBP27.04■■□□□ 1.92
CLIP2-208ENST00000491075 YDJCA8MPS7 323 aa27.03■■□□□ 1.92
CLIP2-208ENST00000491075 H7C1D1 291 aa27.03■■□□□ 1.92
CLIP2-208ENST00000491075 TMPOP42166 694 aaKnown RBP27.03■■□□□ 1.92
CLIP2-208ENST00000491075 CASP8AP2Q9UKL3 1982 aa27.03■■□□□ 1.92
CLIP2-208ENST00000491075 MICALL2Q8IY33 904 aa27.01■■□□□ 1.91
CLIP2-208ENST00000491075 MLLT1Q03111 559 aaPredicted RBP27■■□□□ 1.91
CLIP2-208ENST00000491075 DPF2Q92785 391 aa27■■□□□ 1.91
CLIP2-208ENST00000491075 RGS19P49795 217 aa26.99■■□□□ 1.91
CLIP2-208ENST00000491075 NOGQ13253 232 aa26.99■■□□□ 1.91
CLIP2-208ENST00000491075 SHTN1A0MZ66 631 aa26.98■■□□□ 1.91
CLIP2-208ENST00000491075 WASHC4Q2M389 1173 aa26.98■■□□□ 1.91
CLIP2-208ENST00000491075 CHPF2Q9P2E5 772 aa26.98■■□□□ 1.91
CLIP2-208ENST00000491075 POLR2AP24928 1970 aaKnown RBP26.97■■□□□ 1.91
CLIP2-208ENST00000491075 PLBD2Q8NHP8 589 aa26.97■■□□□ 1.91
CLIP2-208ENST00000491075 PSMD14O00487 310 aa26.96■■□□□ 1.91
CLIP2-208ENST00000491075 CHL1O00533 1208 aa26.96■■□□□ 1.91
CLIP2-208ENST00000491075 SLC34A2O95436 690 aa26.96■■□□□ 1.91
CLIP2-208ENST00000491075 HUNKP57058 714 aa26.96■■□□□ 1.91
CLIP2-208ENST00000491075 KRT24Q2M2I5 525 aa26.96■■□□□ 1.91
CLIP2-208ENST00000491075 USP48Q86UV5 1035 aa26.96■■□□□ 1.91
CLIP2-208ENST00000491075 MCOLN1Q9GZU1 580 aa26.96■■□□□ 1.91
CLIP2-208ENST00000491075 NSFL1CQ9UNZ2 370 aaKnown RBP26.96■■□□□ 1.91
CLIP2-208ENST00000491075 ZBTB12Q9Y330 459 aaPredicted RBP26.96■■□□□ 1.91
CLIP2-208ENST00000491075 RALBP1Q15311 655 aa26.95■■□□□ 1.9
CLIP2-208ENST00000491075 SF3B3Q15393 1217 aaKnown RBP26.95■■□□□ 1.9
CLIP2-208ENST00000491075 DBNDD1Q9H9R9 158 aa26.95■■□□□ 1.9
CLIP2-208ENST00000491075 HOXB7P09629 217 aa26.94■■□□□ 1.9
CLIP2-208ENST00000491075 RPS12P25398 132 aaKnown RBP26.94■■□□□ 1.9
CLIP2-208ENST00000491075 HDGFL1Q5TGJ6 251 aa26.94■■□□□ 1.9
CLIP2-208ENST00000491075 ANKRD13DQ6ZTN6 518 aa26.94■■□□□ 1.9
CLIP2-208ENST00000491075 SAMD7Q7Z3H4 446 aa26.94■■□□□ 1.9
CLIP2-208ENST00000491075 CELF1Q92879 486 aaKnown RBP26.94■■□□□ 1.9
CLIP2-208ENST00000491075 ISCA1Q9BUE6 129 aa26.94■■□□□ 1.9
CLIP2-208ENST00000491075 COL4A1P02462 1669 aa26.93■■□□□ 1.9
CLIP2-208ENST00000491075 C6orf229H3BNL8 230 aa26.93■■□□□ 1.9
CLIP2-208ENST00000491075 KRT26Q7Z3Y9 468 aa26.93■■□□□ 1.9
CLIP2-208ENST00000491075 ZNF428Q96B54 188 aa26.93■■□□□ 1.9
CLIP2-208ENST00000491075 FAM89AQ96GI7 184 aa26.93■■□□□ 1.9
CLIP2-208ENST00000491075 DBF4Q9UBU7 674 aaPredicted RBP26.93■■□□□ 1.9
CLIP2-208ENST00000491075 NEUROD2Q15784 382 aa26.92■■□□□ 1.9
CLIP2-208ENST00000491075 TBC1D10BQ4KMP7 808 aaPredicted RBP26.92■■□□□ 1.9
CLIP2-208ENST00000491075 EYA3Q99504 573 aa26.92■■□□□ 1.9
CLIP2-208ENST00000491075 RIMBP2O15034 1052 aa26.91■■□□□ 1.9
CLIP2-208ENST00000491075 ECE2O60344 883 aa26.91■■□□□ 1.9
CLIP2-208ENST00000491075 POLLQ9UGP5 575 aa26.91■■□□□ 1.9
CLIP2-208ENST00000491075 LAS1LQ9Y4W2 734 aaKnown RBP26.91■■□□□ 1.9
CLIP2-208ENST00000491075 SCN9AQ15858 1988 aa26.9■■□□□ 1.9
CLIP2-208ENST00000491075 GPSM2P81274 684 aa26.9■■□□□ 1.9
CLIP2-208ENST00000491075 DGKZQ13574 1117 aa26.9■■□□□ 1.9
CLIP2-208ENST00000491075 RGMBQ6NW40 437 aa26.9■■□□□ 1.9
CLIP2-208ENST00000491075 DCPSQ96C86 337 aaKnown RBP26.9■■□□□ 1.9
CLIP2-208ENST00000491075 GBA2Q9HCG7 927 aaPredicted RBP26.9■■□□□ 1.9
CLIP2-208ENST00000491075 RTL9Q8NET4 1388 aa26.89■■□□□ 1.9
CLIP2-208ENST00000491075 AKAP11Q9UKA4 1901 aa26.89■■□□□ 1.9
CLIP2-208ENST00000491075 ATP5J2-PTCD1G3V325 749 aa26.89■■□□□ 1.9
CLIP2-208ENST00000491075 EGFRP00533 1210 aa26.89■■□□□ 1.9
CLIP2-208ENST00000491075 CCDC146Q8IYE0 955 aa26.89■■□□□ 1.9
CLIP2-208ENST00000491075 C2orf69Q8N8R5 385 aa26.89■■□□□ 1.9
CLIP2-208ENST00000491075 CFAP44Q96MT7 982 aa26.89■■□□□ 1.9
CLIP2-208ENST00000491075 ZIC5Q96T25 663 aa26.89■■□□□ 1.9
CLIP2-208ENST00000491075 DLK2Q6UY11 383 aa26.88■■□□□ 1.89
CLIP2-208ENST00000491075 HYPKQ9NX55 129 aa26.88■■□□□ 1.89
CLIP2-208ENST00000491075 TRIM35Q9UPQ4 493 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms