RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 METTL22Q9BUU2 404 aaPredicted RBP17.46■□□□□ 0.39
TRAIP-211ENST00000491060 SEC31BQ9NQW1 1179 aa17.46■□□□□ 0.39
TRAIP-211ENST00000491060 RIMBP2O15034 1052 aa17.45■□□□□ 0.38
TRAIP-211ENST00000491060 EIF6P56537 245 aaKnown RBP17.45■□□□□ 0.38
TRAIP-211ENST00000491060 KSR2Q6VAB6 950 aa17.45■□□□□ 0.38
TRAIP-211ENST00000491060 WDR63Q8IWG1 891 aa17.45■□□□□ 0.38
TRAIP-211ENST00000491060 NIM1KQ8IY84 436 aa17.45■□□□□ 0.38
TRAIP-211ENST00000491060 MPNDQ8N594 471 aa17.45■□□□□ 0.38
TRAIP-211ENST00000491060 PSMD1Q99460 953 aa17.45■□□□□ 0.38
TRAIP-211ENST00000491060 SNED1Q8TER0 1413 aa17.45■□□□□ 0.38
TRAIP-211ENST00000491060 IL16Q14005 1332 aa17.45■□□□□ 0.38
TRAIP-211ENST00000491060 APLP1P51693 650 aa17.44■□□□□ 0.38
TRAIP-211ENST00000491060 FKBP5Q13451 457 aaPredicted RBP17.44■□□□□ 0.38
TRAIP-211ENST00000491060 CC2D2BQ6DHV5 1058 aa17.44■□□□□ 0.38
TRAIP-211ENST00000491060 MYH3P11055 1940 aa17.43■□□□□ 0.38
TRAIP-211ENST00000491060 SCN4AP35499 1836 aa17.43■□□□□ 0.38
TRAIP-211ENST00000491060 BBOX1O75936 387 aa17.43■□□□□ 0.38
TRAIP-211ENST00000491060 IGKV5-2P06315 115 aa17.43■□□□□ 0.38
TRAIP-211ENST00000491060 SP8Q8IXZ3 490 aa17.43■□□□□ 0.38
TRAIP-211ENST00000491060 ZBTB38Q8NAP3 1195 aaPredicted RBP17.43■□□□□ 0.38
TRAIP-211ENST00000491060 NSFL1CQ9UNZ2 370 aaKnown RBP17.43■□□□□ 0.38
TRAIP-211ENST00000491060 F6X3S4 739 aa17.42■□□□□ 0.38
TRAIP-211ENST00000491060 C6orf229H3BNL8 230 aa17.42■□□□□ 0.38
TRAIP-211ENST00000491060 VAMP4O75379 141 aa17.42■□□□□ 0.38
TRAIP-211ENST00000491060 GPSM2P81274 684 aa17.42■□□□□ 0.38
TRAIP-211ENST00000491060 NEXNQ0ZGT2 675 aa17.42■□□□□ 0.38
TRAIP-211ENST00000491060 FSTL1Q12841 308 aa17.42■□□□□ 0.38
TRAIP-211ENST00000491060 FLIIQ13045 1269 aa17.42■□□□□ 0.38
TRAIP-211ENST00000491060 HACL1Q9UJ83 578 aa17.42■□□□□ 0.38
TRAIP-211ENST00000491060 FZD9O00144 591 aa17.41■□□□□ 0.38
TRAIP-211ENST00000491060 PCCAP05165 728 aaPredicted RBP17.41■□□□□ 0.38
TRAIP-211ENST00000491060 CCDC191Q8NCU4 936 aa17.41■□□□□ 0.38
TRAIP-211ENST00000491060 TAF1DQ9H5J8 278 aaPredicted RBP17.41■□□□□ 0.38
TRAIP-211ENST00000491060 LTBP1Q14766 1721 aa17.41■□□□□ 0.38
TRAIP-211ENST00000491060 CACNA1FO60840 1977 aa17.4■□□□□ 0.38
TRAIP-211ENST00000491060 RAD17O75943 681 aa17.4■□□□□ 0.38
TRAIP-211ENST00000491060 EPHX2P34913 555 aa17.4■□□□□ 0.38
TRAIP-211ENST00000491060 TRIM28Q13263 835 aaKnown RBP17.4■□□□□ 0.38
TRAIP-211ENST00000491060 SF3B3Q15393 1217 aaKnown RBP17.4■□□□□ 0.38
TRAIP-211ENST00000491060 CHADLQ6NUI6 762 aa17.4■□□□□ 0.38
TRAIP-211ENST00000491060 UBE3BQ7Z3V4 1068 aa17.4■□□□□ 0.38
TRAIP-211ENST00000491060 MYH16Q9H6N6 1097 aa17.4■□□□□ 0.38
TRAIP-211ENST00000491060 LRRC37AA6NMS7 1700 aa17.4■□□□□ 0.38
TRAIP-211ENST00000491060 DUOX1Q9NRD9 1551 aa17.4■□□□□ 0.38
TRAIP-211ENST00000491060 IQCA1LA6NCM1 817 aa17.39■□□□□ 0.37
TRAIP-211ENST00000491060 NEURL1BA8MQ27 555 aa17.39■□□□□ 0.37
TRAIP-211ENST00000491060 PDE8AO60658 829 aa17.39■□□□□ 0.37
TRAIP-211ENST00000491060 DOK7Q18PE1 504 aa17.39■□□□□ 0.37
TRAIP-211ENST00000491060 SUPT20HQ8NEM7 779 aa17.39■□□□□ 0.37
TRAIP-211ENST00000491060 CHMP4AQ9BY43 222 aa17.39■□□□□ 0.37
TRAIP-211ENST00000491060 DBNDD1Q9H9R9 158 aa17.39■□□□□ 0.37
TRAIP-211ENST00000491060 LMOD1P29536 600 aaPredicted RBP17.38■□□□□ 0.37
TRAIP-211ENST00000491060 EPS15P42566 896 aa17.38■□□□□ 0.37
TRAIP-211ENST00000491060 RPS8P62241 208 aaKnown RBP17.38■□□□□ 0.37
TRAIP-211ENST00000491060 CCDC152Q4G0S7 254 aa17.38■□□□□ 0.37
TRAIP-211ENST00000491060 MAP1SQ66K74 1059 aaPredicted RBP17.38■□□□□ 0.37
TRAIP-211ENST00000491060 GPC2Q8N158 579 aa17.38■□□□□ 0.37
TRAIP-211ENST00000491060 DNAAF4Q8WXU2 420 aa17.38■□□□□ 0.37
TRAIP-211ENST00000491060 SLC4A10Q6U841 1118 aa17.37■□□□□ 0.37
TRAIP-211ENST00000491060 L3MBTL3Q96JM7 780 aaPredicted RBP17.37■□□□□ 0.37
TRAIP-211ENST00000491060 BCL2L13Q9BXK5 485 aa17.37■□□□□ 0.37
TRAIP-211ENST00000491060 ANKIB1Q9P2G1 1089 aa17.37■□□□□ 0.37
TRAIP-211ENST00000491060 POLLQ9UGP5 575 aa17.37■□□□□ 0.37
TRAIP-211ENST00000491060 SHTN1A0MZ66 631 aa17.36■□□□□ 0.37
TRAIP-211ENST00000491060 UFL1O94874 794 aa17.36■□□□□ 0.37
TRAIP-211ENST00000491060 CTSWP56202 376 aa17.36■□□□□ 0.37
TRAIP-211ENST00000491060 CXCL9Q07325 125 aa17.36■□□□□ 0.37
TRAIP-211ENST00000491060 WASHC4Q2M389 1173 aa17.36■□□□□ 0.37
TRAIP-211ENST00000491060 GRIPAP1Q4V328 841 aa17.36■□□□□ 0.37
TRAIP-211ENST00000491060 CDCA7LQ96GN5 454 aa17.36■□□□□ 0.37
TRAIP-211ENST00000491060 GREM2Q9H772 168 aa17.36■□□□□ 0.37
TRAIP-211ENST00000491060 ZNRF3Q9ULT6 936 aa17.36■□□□□ 0.37
TRAIP-211ENST00000491060 CHMP3Q9Y3E7 222 aa17.36■□□□□ 0.37
TRAIP-211ENST00000491060 G3V3G9 751 aa17.35■□□□□ 0.37
TRAIP-211ENST00000491060 GMPSP49915 693 aaPredicted RBP17.35■□□□□ 0.37
TRAIP-211ENST00000491060 DCAF8Q5TAQ9 597 aa17.35■□□□□ 0.37
TRAIP-211ENST00000491060 ANKRD18AQ8IVF6 992 aa17.35■□□□□ 0.37
TRAIP-211ENST00000491060 KCNQ5Q9NR82 932 aa17.35■□□□□ 0.37
TRAIP-211ENST00000491060 WTIPA6NIX2 430 aaPredicted RBP17.34■□□□□ 0.37
TRAIP-211ENST00000491060 YDJCA8MPS7 323 aa17.34■□□□□ 0.37
TRAIP-211ENST00000491060 SCNN1DP51172 638 aa17.34■□□□□ 0.37
TRAIP-211ENST00000491060 FMR1Q06787 632 aaKnown RBP eCLIP17.34■□□□□ 0.37
TRAIP-211ENST00000491060 KIAA2012Q0VF49 1180 aa17.34■□□□□ 0.37
TRAIP-211ENST00000491060 GCKRQ14397 625 aa17.34■□□□□ 0.37
TRAIP-211ENST00000491060 NCBP3Q53F19 620 aaKnown RBP17.34■□□□□ 0.37
TRAIP-211ENST00000491060 CIAPIN1Q6FI81 312 aa17.34■□□□□ 0.37
TRAIP-211ENST00000491060 LDHDQ86WU2 507 aa17.34■□□□□ 0.37
TRAIP-211ENST00000491060 TBC1D16Q8TBP0 767 aa17.34■□□□□ 0.37
TRAIP-211ENST00000491060 RTFDC1Q9BY42 306 aaPredicted RBP17.34■□□□□ 0.37
TRAIP-211ENST00000491060 ZBTB12Q9Y330 459 aaPredicted RBP17.34■□□□□ 0.37
TRAIP-211ENST00000491060 CDHR2Q9BYE9 1310 aa17.33■□□□□ 0.36
TRAIP-211ENST00000491060 HSP90B1P14625 803 aaKnown RBP17.33■□□□□ 0.36
TRAIP-211ENST00000491060 TMC4Q7Z404 712 aa17.33■□□□□ 0.36
TRAIP-211ENST00000491060 DNAJC5GQ8N7S2 189 aa17.33■□□□□ 0.36
TRAIP-211ENST00000491060 MKRN1Q9UHC7 482 aaKnown RBP17.33■□□□□ 0.36
TRAIP-211ENST00000491060 ECE2O60344 883 aa17.32■□□□□ 0.36
TRAIP-211ENST00000491060 FAM161AQ3B820 660 aa17.32■□□□□ 0.36
TRAIP-211ENST00000491060 TTLL11Q8NHH1 800 aa17.32■□□□□ 0.36
TRAIP-211ENST00000491060 FBXW7Q969H0 707 aa17.32■□□□□ 0.36
TRAIP-211ENST00000491060 SCN9AQ15858 1988 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms