RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	APBB1	O00213	710 aa		7.62	□□□□□ -1.19
FN1-223	ENST00000490833	SGSM2	O43147	1006 aa		7.62	□□□□□ -1.19
FN1-223	ENST00000490833	SMARCA5	O60264	1052 aa	Predicted RBP	7.62	□□□□□ -1.19
FN1-223	ENST00000490833	HMGB1	P09429	215 aa	Known RBP	7.62	□□□□□ -1.19
FN1-223	ENST00000490833	HS1BP3	Q53T59	392 aa		7.62	□□□□□ -1.19
FN1-223	ENST00000490833	ILDR2	Q71H61	639 aa		7.62	□□□□□ -1.19
FN1-223	ENST00000490833	VSIG10	Q8N0Z9	540 aa		7.62	□□□□□ -1.19
FN1-223	ENST00000490833	PLBD2	Q8NHP8	589 aa		7.62	□□□□□ -1.19
FN1-223	ENST00000490833	TRIM44	Q96DX7	344 aa	Predicted RBP	7.62	□□□□□ -1.19
FN1-223	ENST00000490833	PHAX	Q9H814	394 aa	Known RBP	7.62	□□□□□ -1.19
FN1-223	ENST00000490833	COPRS	Q9NQ92	184 aa		7.62	□□□□□ -1.19
FN1-223	ENST00000490833	LIMCH1	Q9UPQ0	1083 aa		7.62	□□□□□ -1.19
FN1-223	ENST00000490833	KIF3A	Q9Y496	699 aa		7.62	□□□□□ -1.19
FN1-223	ENST00000490833	DDX49	Q9Y6V7	483 aa	Known RBP	7.62	□□□□□ -1.19
FN1-223	ENST00000490833	CAMTA1	Q9Y6Y1	1673 aa		7.62	□□□□□ -1.19
FN1-223	ENST00000490833	TMEM94	Q12767	1356 aa		7.61	□□□□□ -1.19
FN1-223	ENST00000490833	BAG4	O95429	457 aa	Known RBP	7.61	□□□□□ -1.19
FN1-223	ENST00000490833	NKX1-1	Q15270	411 aa	Predicted RBP	7.61	□□□□□ -1.19
FN1-223	ENST00000490833	PPP1R15B	Q5SWA1	713 aa		7.61	□□□□□ -1.19
FN1-223	ENST00000490833	VPS53	Q5VIR6	699 aa		7.61	□□□□□ -1.19
FN1-223	ENST00000490833		Q6ZNB5	142 aa		7.61	□□□□□ -1.19
FN1-223	ENST00000490833	USHBP1	Q8N6Y0	703 aa		7.61	□□□□□ -1.19
FN1-223	ENST00000490833	FAM184A	Q8NB25	1140 aa		7.61	□□□□□ -1.19
FN1-223	ENST00000490833	SNRK	Q9NRH2	765 aa		7.61	□□□□□ -1.19
FN1-223	ENST00000490833	CYP46A1	Q9Y6A2	500 aa		7.61	□□□□□ -1.19
FN1-223	ENST00000490833	KDM3B	Q7LBC6	1761 aa		7.61	□□□□□ -1.19
FN1-223	ENST00000490833	MARF1	Q9Y4F3	1742 aa	Known RBP	7.61	□□□□□ -1.19
FN1-223	ENST00000490833		A0A0G2JS52	829 aa		7.6	□□□□□ -1.19
FN1-223	ENST00000490833	CYP2E1	P05181	493 aa	Predicted RBP	7.6	□□□□□ -1.19
FN1-223	ENST00000490833	NBPF7	P0C2Y1	421 aa	Predicted RBP	7.6	□□□□□ -1.19
FN1-223	ENST00000490833	ZNF445	P59923	1031 aa		7.6	□□□□□ -1.19
FN1-223	ENST00000490833	GCKR	Q14397	625 aa		7.6	□□□□□ -1.19
FN1-223	ENST00000490833	TSGA10IP	Q3SY00	556 aa		7.6	□□□□□ -1.19
FN1-223	ENST00000490833	HSP90AB3P	Q58FF7	597 aa		7.6	□□□□□ -1.19
FN1-223	ENST00000490833	SPRYD3	Q8NCJ5	442 aa		7.6	□□□□□ -1.19
FN1-223	ENST00000490833	CCDC191	Q8NCU4	936 aa		7.6	□□□□□ -1.19
FN1-223	ENST00000490833	RGS22	Q8NE09	1264 aa		7.6	□□□□□ -1.19
FN1-223	ENST00000490833	ZCRB1	Q8TBF4	217 aa	Known RBP	7.6	□□□□□ -1.19
FN1-223	ENST00000490833	PI4K2B	Q8TCG2	481 aa		7.6	□□□□□ -1.19
FN1-223	ENST00000490833	NECTIN2	Q92692	538 aa		7.6	□□□□□ -1.19
FN1-223	ENST00000490833	KCNB2	Q92953	911 aa		7.6	□□□□□ -1.19
FN1-223	ENST00000490833	LRRC59	Q96AG4	307 aa	Known RBP	7.6	□□□□□ -1.19
FN1-223	ENST00000490833	TMX3	Q96JJ7	454 aa		7.6	□□□□□ -1.19
FN1-223	ENST00000490833	CDCA7	Q9BWT1	371 aa	Predicted RBP	7.6	□□□□□ -1.19
FN1-223	ENST00000490833	CARD10	Q9BWT7	1032 aa		7.6	□□□□□ -1.19
FN1-223	ENST00000490833	GRPEL1	Q9HAV7	217 aa		7.6	□□□□□ -1.19
FN1-223	ENST00000490833	ADAMTS7	Q9UKP4	1686 aa		7.6	□□□□□ -1.19
FN1-223	ENST00000490833	ADCY9	O60503	1353 aa		7.59	□□□□□ -1.19
FN1-223	ENST00000490833	WDR17	Q8IZU2	1322 aa		7.59	□□□□□ -1.19
FN1-223	ENST00000490833	NEURL1B	A8MQ27	555 aa		7.59	□□□□□ -1.19
FN1-223	ENST00000490833	ATP5J	P18859	108 aa		7.59	□□□□□ -1.19
FN1-223	ENST00000490833	KCNJ4	P48050	445 aa		7.59	□□□□□ -1.19
FN1-223	ENST00000490833	PTPN5	P54829	565 aa		7.59	□□□□□ -1.19
FN1-223	ENST00000490833	ZC3H6	P61129	1189 aa	Known RBP	7.59	□□□□□ -1.19
FN1-223	ENST00000490833	CCDC173	Q0VFZ6	552 aa		7.59	□□□□□ -1.19
FN1-223	ENST00000490833	TRIM28	Q13263	835 aa	Known RBP	7.59	□□□□□ -1.19
FN1-223	ENST00000490833	NFATC2IP	Q8NCF5	419 aa		7.59	□□□□□ -1.19
FN1-223	ENST00000490833	OXER1	Q8TDS5	423 aa		7.59	□□□□□ -1.19
FN1-223	ENST00000490833	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	7.59	□□□□□ -1.19
FN1-223	ENST00000490833	AKAP2	Q9Y2D5	859 aa		7.59	□□□□□ -1.19
FN1-223	ENST00000490833	TRPM3	Q9HCF6	1732 aa	Predicted RBP	7.58	□□□□□ -1.2
FN1-223	ENST00000490833	SOCS7	O14512	581 aa		7.58	□□□□□ -1.2
FN1-223	ENST00000490833	CIAO1	O76071	339 aa		7.58	□□□□□ -1.2
FN1-223	ENST00000490833	BRD1	O95696	1058 aa		7.58	□□□□□ -1.2
FN1-223	ENST00000490833	STARD3NL	O95772	234 aa		7.58	□□□□□ -1.2
FN1-223	ENST00000490833	IL2RB	P14784	551 aa		7.58	□□□□□ -1.2
FN1-223	ENST00000490833	HMGB2	P26583	209 aa	Known RBP	7.58	□□□□□ -1.2
FN1-223	ENST00000490833	MCM5	P33992	734 aa		7.58	□□□□□ -1.2
FN1-223	ENST00000490833	IL15	P40933	162 aa	Predicted RBP	7.58	□□□□□ -1.2
FN1-223	ENST00000490833	EVA1C	P58658	441 aa		7.58	□□□□□ -1.2
FN1-223	ENST00000490833	RABL6	Q3YEC7	729 aa	Predicted RBP	7.58	□□□□□ -1.2
FN1-223	ENST00000490833	COPS6	Q7L5N1	327 aa		7.58	□□□□□ -1.2
FN1-223	ENST00000490833	AACS	Q86V21	672 aa		7.58	□□□□□ -1.2
FN1-223	ENST00000490833	OTUD7A	Q8TE49	926 aa	Predicted RBP	7.58	□□□□□ -1.2
FN1-223	ENST00000490833	AK7	Q96M32	723 aa		7.58	□□□□□ -1.2
FN1-223	ENST00000490833	SLAIN2	Q9P270	581 aa		7.58	□□□□□ -1.2
FN1-223	ENST00000490833	SMC3	Q9UQE7	1217 aa		7.58	□□□□□ -1.2
FN1-223	ENST00000490833	SOS2	Q07890	1332 aa	Predicted RBP	7.57	□□□□□ -1.2
FN1-223	ENST00000490833	MRC1	P22897	1456 aa		7.57	□□□□□ -1.2
FN1-223	ENST00000490833	GOLGA8CP	A6NN73	597 aa		7.57	□□□□□ -1.2
FN1-223	ENST00000490833	CAVIN2	O95810	425 aa		7.57	□□□□□ -1.2
FN1-223	ENST00000490833	ZFY	P08048	801 aa	Predicted RBP	7.57	□□□□□ -1.2
FN1-223	ENST00000490833	PTPRE	P23469	700 aa		7.57	□□□□□ -1.2
FN1-223	ENST00000490833	UVSSA	Q2YD98	709 aa		7.57	□□□□□ -1.2
FN1-223	ENST00000490833	ATL3	Q6DD88	541 aa		7.57	□□□□□ -1.2
FN1-223	ENST00000490833	TOM1L2	Q6ZVM7	507 aa		7.57	□□□□□ -1.2
FN1-223	ENST00000490833	NUTM1	Q86Y26	1132 aa		7.57	□□□□□ -1.2
FN1-223	ENST00000490833	MAP4K1	Q92918	833 aa		7.57	□□□□□ -1.2
FN1-223	ENST00000490833	CRISPLD2	Q9H0B8	497 aa		7.57	□□□□□ -1.2
FN1-223	ENST00000490833	IL1RAPL2	Q9NP60	686 aa		7.57	□□□□□ -1.2
FN1-223	ENST00000490833	PRDM11	Q9NQV5	511 aa		7.57	□□□□□ -1.2
FN1-223	ENST00000490833	CWC25	Q9NXE8	425 aa	Predicted RBP	7.57	□□□□□ -1.2
FN1-223	ENST00000490833	CTNNA3	Q9UI47	895 aa		7.57	□□□□□ -1.2
FN1-223	ENST00000490833	VPS9D1	Q9Y2B5	631 aa		7.57	□□□□□ -1.2
FN1-223	ENST00000490833	ABCC12	Q96J65	1359 aa		7.57	□□□□□ -1.2
FN1-223	ENST00000490833	ALS2	Q96Q42	1657 aa		7.57	□□□□□ -1.2
FN1-223	ENST00000490833	PDIA6	Q15084	440 aa		7.56	□□□□□ -1.2
FN1-223	ENST00000490833	MCTP1	Q6DN14	999 aa		7.56	□□□□□ -1.2
FN1-223	ENST00000490833	ZSCAN25	Q6NSZ9	544 aa		7.56	□□□□□ -1.2
FN1-223	ENST00000490833	CWC27	Q6UX04	472 aa	Known RBP	7.56	□□□□□ -1.2

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