RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 BICDL1Q6ZP65 573 aa9.74□□□□□ -0.85
PRPF4B-208ENST00000490653 RBM46Q8TBY0 533 aaKnown RBP9.74□□□□□ -0.85
PRPF4B-208ENST00000490653 KLRG1Q96E93 195 aa9.74□□□□□ -0.85
PRPF4B-208ENST00000490653 LRCH3Q96II8 777 aa9.74□□□□□ -0.85
PRPF4B-208ENST00000490653 WDR90Q96KV7 1748 aa9.73□□□□□ -0.85
PRPF4B-208ENST00000490653 POTECB2RU33 542 aa9.73□□□□□ -0.85
PRPF4B-208ENST00000490653 STARD3NLO95772 234 aa9.73□□□□□ -0.85
PRPF4B-208ENST00000490653 TBC1D9BQ66K14 1250 aa9.73□□□□□ -0.85
PRPF4B-208ENST00000490653 FMNL2Q96PY5 1086 aa9.73□□□□□ -0.85
PRPF4B-208ENST00000490653 HPS5Q9UPZ3 1129 aa9.73□□□□□ -0.85
PRPF4B-208ENST00000490653 ZNF330Q9Y3S2 320 aaPredicted RBP9.73□□□□□ -0.85
PRPF4B-208ENST00000490653 COL15A1P39059 1388 aa9.73□□□□□ -0.85
PRPF4B-208ENST00000490653 UBR2Q8IWV8 1755 aa9.73□□□□□ -0.85
PRPF4B-208ENST00000490653 SERPINB2P05120 415 aa9.72□□□□□ -0.85
PRPF4B-208ENST00000490653 RASSF7Q02833 373 aa9.72□□□□□ -0.85
PRPF4B-208ENST00000490653 TAF7Q15545 349 aaPredicted RBP9.72□□□□□ -0.85
PRPF4B-208ENST00000490653 RTF1Q92541 710 aaKnown RBP9.72□□□□□ -0.85
PRPF4B-208ENST00000490653 RRAGCQ9HB90 399 aa9.72□□□□□ -0.85
PRPF4B-208ENST00000490653 TSKSQ9UJT2 592 aa9.72□□□□□ -0.85
PRPF4B-208ENST00000490653 NBPF26B4DH59 902 aa9.71□□□□□ -0.86
PRPF4B-208ENST00000490653 PDIA6Q15084 440 aa9.71□□□□□ -0.86
PRPF4B-208ENST00000490653 NFE2L2Q16236 605 aa9.71□□□□□ -0.86
PRPF4B-208ENST00000490653 NBPF10Q6P3W6 841 aaKnown RBP9.71□□□□□ -0.86
PRPF4B-208ENST00000490653 NBPF15Q8N660 670 aa9.71□□□□□ -0.86
PRPF4B-208ENST00000490653 CARMIL3Q8ND23 1372 aa9.71□□□□□ -0.86
PRPF4B-208ENST00000490653 AFDNP55196 1824 aaKnown RBP9.7□□□□□ -0.86
PRPF4B-208ENST00000490653 DLG5Q8TDM6 1919 aa9.7□□□□□ -0.86
PRPF4B-208ENST00000490653 HTATSF1O43719 755 aaKnown RBP9.7□□□□□ -0.86
PRPF4B-208ENST00000490653 CAMTA2O94983 1202 aa9.7□□□□□ -0.86
PRPF4B-208ENST00000490653 IL6STP40189 918 aaPredicted RBP9.7□□□□□ -0.86
PRPF4B-208ENST00000490653 NBR1Q14596 966 aa9.7□□□□□ -0.86
PRPF4B-208ENST00000490653 RALBP1Q15311 655 aa9.7□□□□□ -0.86
PRPF4B-208ENST00000490653 TSR1Q2NL82 804 aaKnown RBP9.7□□□□□ -0.86
PRPF4B-208ENST00000490653 PACS2Q86VP3 889 aa9.7□□□□□ -0.86
PRPF4B-208ENST00000490653 CCDC146Q8IYE0 955 aa9.7□□□□□ -0.86
PRPF4B-208ENST00000490653 TEX13AQ9BXU3 409 aaPredicted RBP9.7□□□□□ -0.86
PRPF4B-208ENST00000490653 RNF181Q9P0P0 153 aa9.7□□□□□ -0.86
PRPF4B-208ENST00000490653 PIM2Q9P1W9 311 aa9.7□□□□□ -0.86
PRPF4B-208ENST00000490653 RRP7AQ9Y3A4 280 aaKnown RBP9.7□□□□□ -0.86
PRPF4B-208ENST00000490653 NFKBIEO00221 500 aa9.69□□□□□ -0.86
PRPF4B-208ENST00000490653 MAP3K7O43318 606 aa9.69□□□□□ -0.86
PRPF4B-208ENST00000490653 SNRPA1P09661 255 aaKnown RBP9.69□□□□□ -0.86
PRPF4B-208ENST00000490653 FSTL1Q12841 308 aa9.69□□□□□ -0.86
PRPF4B-208ENST00000490653 NGEFQ8N5V2 710 aa9.69□□□□□ -0.86
PRPF4B-208ENST00000490653 ARFGEF1Q9Y6D6 1849 aa9.68□□□□□ -0.86
PRPF4B-208ENST00000490653 A0A087WZG4 1122 aa9.68□□□□□ -0.86
PRPF4B-208ENST00000490653 RIPK4P57078 832 aa9.68□□□□□ -0.86
PRPF4B-208ENST00000490653 EIF4A1P60842 406 aaKnown RBP9.68□□□□□ -0.86
PRPF4B-208ENST00000490653 HLFQ16534 295 aa9.68□□□□□ -0.86
PRPF4B-208ENST00000490653 DALRD3Q5D0E6 543 aaKnown RBP9.68□□□□□ -0.86
PRPF4B-208ENST00000490653 DZIP3Q86Y13 1208 aaKnown RBP9.68□□□□□ -0.86
PRPF4B-208ENST00000490653 SPDYE16A6NNV3 312 aaPredicted RBP9.67□□□□□ -0.86
PRPF4B-208ENST00000490653 TMPOP42166 694 aaKnown RBP9.67□□□□□ -0.86
PRPF4B-208ENST00000490653 NEUROD2Q15784 382 aa9.67□□□□□ -0.86
PRPF4B-208ENST00000490653 CCDC184Q52MB2 194 aa9.67□□□□□ -0.86
PRPF4B-208ENST00000490653 PRR5LQ6MZQ0 368 aa9.67□□□□□ -0.86
PRPF4B-208ENST00000490653 Q6ZNB5 142 aa9.67□□□□□ -0.86
PRPF4B-208ENST00000490653 C2CD5Q86YS7 1000 aa9.67□□□□□ -0.86
PRPF4B-208ENST00000490653 NRXN2Q9P2S2 1712 aa9.67□□□□□ -0.86
PRPF4B-208ENST00000490653 MYBBP1AQ9BQG0 1328 aaKnown RBP9.66□□□□□ -0.86
PRPF4B-208ENST00000490653 FAM177BA6PVY3 158 aa9.66□□□□□ -0.86
PRPF4B-208ENST00000490653 TTLL7Q6ZT98 887 aa9.66□□□□□ -0.86
PRPF4B-208ENST00000490653 ADAMTS8Q9UP79 889 aa9.66□□□□□ -0.86
PRPF4B-208ENST00000490653 SBF1O95248 1867 aa9.66□□□□□ -0.86
PRPF4B-208ENST00000490653 ANXA1P04083 346 aa9.65□□□□□ -0.86
PRPF4B-208ENST00000490653 NEFMP07197 916 aa9.65□□□□□ -0.86
PRPF4B-208ENST00000490653 HSPA1AP0DMV8 641 aaKnown RBP9.65□□□□□ -0.86
PRPF4B-208ENST00000490653 HSPA1BP0DMV9 641 aaKnown RBP9.65□□□□□ -0.86
PRPF4B-208ENST00000490653 PPP4CP60510 307 aa9.65□□□□□ -0.86
PRPF4B-208ENST00000490653 KRT24Q2M2I5 525 aa9.65□□□□□ -0.86
PRPF4B-208ENST00000490653 BBXQ8WY36 941 aaPredicted RBP9.65□□□□□ -0.86
PRPF4B-208ENST00000490653 ZNF622Q969S3 477 aaKnown RBP eCLIP9.65□□□□□ -0.86
PRPF4B-208ENST00000490653 SETDB2Q96T68 719 aa9.65□□□□□ -0.86
PRPF4B-208ENST00000490653 PRKRIP1Q9H875 184 aaPredicted RBP9.65□□□□□ -0.86
PRPF4B-208ENST00000490653 ANKRD31Q8N7Z5 1873 aa9.64□□□□□ -0.87
PRPF4B-208ENST00000490653 KDM2BQ8NHM5 1336 aa9.64□□□□□ -0.87
PRPF4B-208ENST00000490653 MAPK8IP3Q9UPT6 1336 aa9.64□□□□□ -0.87
PRPF4B-208ENST00000490653 GLTPD2A6NH11 291 aa9.64□□□□□ -0.87
PRPF4B-208ENST00000490653 MYL6BP14649 208 aa9.64□□□□□ -0.87
PRPF4B-208ENST00000490653 PRSS12P56730 875 aa9.64□□□□□ -0.87
PRPF4B-208ENST00000490653 TNS4Q8IZW8 715 aa9.64□□□□□ -0.87
PRPF4B-208ENST00000490653 NECTIN2Q92692 538 aa9.64□□□□□ -0.87
PRPF4B-208ENST00000490653 CDCA7LQ96GN5 454 aa9.64□□□□□ -0.87
PRPF4B-208ENST00000490653 FAM198AQ9UFP1 575 aa9.64□□□□□ -0.87
PRPF4B-208ENST00000490653 H0YIN7 160 aa9.63□□□□□ -0.87
PRPF4B-208ENST00000490653 EIF2S2P20042 333 aaKnown RBP9.63□□□□□ -0.87
PRPF4B-208ENST00000490653 PROSER3Q2NL68 480 aa9.63□□□□□ -0.87
PRPF4B-208ENST00000490653 TTLL6Q8N841 843 aa9.63□□□□□ -0.87
PRPF4B-208ENST00000490653 SMC1BQ8NDV3 1235 aa9.63□□□□□ -0.87
PRPF4B-208ENST00000490653 PNISRQ8TF01 805 aaKnown RBP9.63□□□□□ -0.87
PRPF4B-208ENST00000490653 BRIP1Q9BX63 1249 aa9.63□□□□□ -0.87
PRPF4B-208ENST00000490653 PNNQ9H307 717 aaKnown RBP9.63□□□□□ -0.87
PRPF4B-208ENST00000490653 TSPYL4Q9UJ04 414 aa9.63□□□□□ -0.87
PRPF4B-208ENST00000490653 NIP7Q9Y221 180 aaKnown RBP eCLIP9.63□□□□□ -0.87
PRPF4B-208ENST00000490653 TNRC6CQ9HCJ0 1690 aaKnown RBP9.63□□□□□ -0.87
PRPF4B-208ENST00000490653 C21orf2O43822 256 aa9.62□□□□□ -0.87
PRPF4B-208ENST00000490653 LAPTM4AQ15012 233 aa9.62□□□□□ -0.87
PRPF4B-208ENST00000490653 TJAP1Q5JTD0 557 aa9.62□□□□□ -0.87
PRPF4B-208ENST00000490653 SAMD7Q7Z3H4 446 aa9.62□□□□□ -0.87
PRPF4B-208ENST00000490653 LRP10Q7Z4F1 713 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms