RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 CDC42BPBQ9Y5S2 1711 aa16.89■□□□□ 0.29
ARHGEF39-205ENST00000490638 SDSP20132 328 aa16.89■□□□□ 0.29
ARHGEF39-205ENST00000490638 KRT85P78386 507 aa16.89■□□□□ 0.29
ARHGEF39-205ENST00000490638 TTLL7Q6ZT98 887 aa16.89■□□□□ 0.29
ARHGEF39-205ENST00000490638 ANKARQ7Z5J8 1434 aa16.89■□□□□ 0.29
ARHGEF39-205ENST00000490638 NBPF7P0C2Y1 421 aaPredicted RBP16.89■□□□□ 0.29
ARHGEF39-205ENST00000490638 PICALMQ13492 652 aa16.89■□□□□ 0.29
ARHGEF39-205ENST00000490638 ZHX3Q9H4I2 956 aa16.89■□□□□ 0.29
ARHGEF39-205ENST00000490638 CATIPQ7Z7H3 387 aa16.88■□□□□ 0.29
ARHGEF39-205ENST00000490638 FERMT3Q86UX7 667 aa16.88■□□□□ 0.29
ARHGEF39-205ENST00000490638 ZNF594Q96JF6 807 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF39-205ENST00000490638 SLC4A4Q9Y6R1 1079 aa16.88■□□□□ 0.29
ARHGEF39-205ENST00000490638 PRPF40AO75400 957 aaKnown RBP16.88■□□□□ 0.29
ARHGEF39-205ENST00000490638 IPO7O95373 1038 aaKnown RBP16.88■□□□□ 0.29
ARHGEF39-205ENST00000490638 PAG1Q9NWQ8 432 aa16.88■□□□□ 0.29
ARHGEF39-205ENST00000490638 SSBP05455 408 aaKnown RBP eCLIP16.88■□□□□ 0.29
ARHGEF39-205ENST00000490638 LDHBP07195 334 aaKnown RBP16.87■□□□□ 0.29
ARHGEF39-205ENST00000490638 GRM1Q13255 1194 aa16.87■□□□□ 0.29
ARHGEF39-205ENST00000490638 TMEM67Q5HYA8 995 aa16.87■□□□□ 0.29
ARHGEF39-205ENST00000490638 GJA3Q9Y6H8 435 aa16.87■□□□□ 0.29
ARHGEF39-205ENST00000490638 ZBTB7BO15156 539 aaPredicted RBP16.87■□□□□ 0.29
ARHGEF39-205ENST00000490638 KDM5AP29375 1690 aaKnown RBP16.87■□□□□ 0.29
ARHGEF39-205ENST00000490638 OLFM4Q6UX06 510 aa16.87■□□□□ 0.29
ARHGEF39-205ENST00000490638 DPP8Q6V1X1 898 aaPredicted RBP16.87■□□□□ 0.29
ARHGEF39-205ENST00000490638 GGA1Q9UJY5 639 aa16.87■□□□□ 0.29
ARHGEF39-205ENST00000490638 A0A1B0GUL7 405 aa16.86■□□□□ 0.29
ARHGEF39-205ENST00000490638 GOLGA8BA8MQT2 603 aa16.86■□□□□ 0.29
ARHGEF39-205ENST00000490638 NLGN1Q8N2Q7 840 aa16.86■□□□□ 0.29
ARHGEF39-205ENST00000490638 LARGE2Q8N3Y3 721 aa16.86■□□□□ 0.29
ARHGEF39-205ENST00000490638 VAT1LQ9HCJ6 419 aa16.86■□□□□ 0.29
ARHGEF39-205ENST00000490638 ZBTB1Q9Y2K1 713 aa16.86■□□□□ 0.29
ARHGEF39-205ENST00000490638 RTL1A6NKG5 1358 aa16.86■□□□□ 0.29
ARHGEF39-205ENST00000490638 IQGAP3Q86VI3 1631 aa16.86■□□□□ 0.29
ARHGEF39-205ENST00000490638 RNF17Q9BXT8 1623 aaKnown RBP16.86■□□□□ 0.29
ARHGEF39-205ENST00000490638 LARP6Q9BRS8 491 aaKnown RBP16.86■□□□□ 0.29
ARHGEF39-205ENST00000490638 GOLGA8AA7E2F4 631 aa16.86■□□□□ 0.29
ARHGEF39-205ENST00000490638 HIBADHP31937 336 aaKnown RBP16.86■□□□□ 0.29
ARHGEF39-205ENST00000490638 RPS8P62241 208 aaKnown RBP16.86■□□□□ 0.29
ARHGEF39-205ENST00000490638 CCT2P78371 535 aaKnown RBP16.86■□□□□ 0.29
ARHGEF39-205ENST00000490638 MICU3Q86XE3 530 aa16.86■□□□□ 0.29
ARHGEF39-205ENST00000490638 MIGA1Q8NAN2 632 aa16.86■□□□□ 0.29
ARHGEF39-205ENST00000490638 NCOA7Q8NI08 942 aa16.86■□□□□ 0.29
ARHGEF39-205ENST00000490638 SYNMO15061 1565 aa16.85■□□□□ 0.29
ARHGEF39-205ENST00000490638 MBD3O95983 291 aa16.85■□□□□ 0.29
ARHGEF39-205ENST00000490638 AXIN2Q9Y2T1 843 aa16.85■□□□□ 0.29
ARHGEF39-205ENST00000490638 CRKLP46109 303 aaKnown RBP16.85■□□□□ 0.29
ARHGEF39-205ENST00000490638 USPL1Q5W0Q7 1092 aa16.85■□□□□ 0.29
ARHGEF39-205ENST00000490638 SUCLG2Q96I99 432 aa16.85■□□□□ 0.29
ARHGEF39-205ENST00000490638 NEK1Q96PY6 1258 aa16.85■□□□□ 0.29
ARHGEF39-205ENST00000490638 MCMDC2Q4G0Z9 681 aa16.85■□□□□ 0.29
ARHGEF39-205ENST00000490638 ERBB4Q15303 1308 aa16.84■□□□□ 0.29
ARHGEF39-205ENST00000490638 TAF5LO75529 589 aa16.84■□□□□ 0.29
ARHGEF39-205ENST00000490638 KAT14Q9H8E8 782 aa16.84■□□□□ 0.29
ARHGEF39-205ENST00000490638 KIF24Q5T7B8 1368 aa16.84■□□□□ 0.29
ARHGEF39-205ENST00000490638 PLCG2P16885 1265 aa16.84■□□□□ 0.29
ARHGEF39-205ENST00000490638 LMOD1P29536 600 aaPredicted RBP16.84■□□□□ 0.29
ARHGEF39-205ENST00000490638 NF2P35240 595 aa16.84■□□□□ 0.29
ARHGEF39-205ENST00000490638 CNKSR2Q8WXI2 1034 aa16.84■□□□□ 0.29
ARHGEF39-205ENST00000490638 LIMCH1Q9UPQ0 1083 aa16.84■□□□□ 0.29
ARHGEF39-205ENST00000490638 THRAP3Q9Y2W1 955 aaKnown RBP16.84■□□□□ 0.29
ARHGEF39-205ENST00000490638 C8orf76Q96K31 380 aa16.83■□□□□ 0.29
ARHGEF39-205ENST00000490638 SH2B1Q9NRF2 756 aaPredicted RBP16.83■□□□□ 0.29
ARHGEF39-205ENST00000490638 BCS1LQ9Y276 419 aa16.83■□□□□ 0.29
ARHGEF39-205ENST00000490638 DIP2CQ9Y2E4 1556 aa16.83■□□□□ 0.29
ARHGEF39-205ENST00000490638 MAGEB6P1A0A0J9YX57 407 aa16.83■□□□□ 0.28
ARHGEF39-205ENST00000490638 KIF5BP33176 963 aa16.83■□□□□ 0.28
ARHGEF39-205ENST00000490638 PUM3Q15397 648 aaKnown RBP16.83■□□□□ 0.28
ARHGEF39-205ENST00000490638 MAGEB6Q8N7X4 407 aa16.83■□□□□ 0.28
ARHGEF39-205ENST00000490638 MCM9Q9NXL9 1143 aa16.83■□□□□ 0.28
ARHGEF39-205ENST00000490638 CFAP45Q9UL16 551 aa16.83■□□□□ 0.28
ARHGEF39-205ENST00000490638 GUCY1B3Q02153 619 aa16.83■□□□□ 0.28
ARHGEF39-205ENST00000490638 CCDC144CPQ8IYA2 1237 aa16.83■□□□□ 0.28
ARHGEF39-205ENST00000490638 ESR2Q92731 530 aa16.83■□□□□ 0.28
ARHGEF39-205ENST00000490638 TTC41PQ6P2S7 1318 aa16.83■□□□□ 0.28
ARHGEF39-205ENST00000490638 NEURL1BA8MQ27 555 aa16.82■□□□□ 0.28
ARHGEF39-205ENST00000490638 DBNDD2Q9BQY9 259 aa16.82■□□□□ 0.28
ARHGEF39-205ENST00000490638 PTPRMP28827 1452 aa16.82■□□□□ 0.28
ARHGEF39-205ENST00000490638 CLTCL1P53675 1640 aa16.82■□□□□ 0.28
ARHGEF39-205ENST00000490638 ALDH1B1P30837 517 aa16.82■□□□□ 0.28
ARHGEF39-205ENST00000490638 EPS15P42566 896 aa16.82■□□□□ 0.28
ARHGEF39-205ENST00000490638 RAB11FIP4Q86YS3 637 aa16.82■□□□□ 0.28
ARHGEF39-205ENST00000490638 NAT10Q9H0A0 1025 aaKnown RBP16.82■□□□□ 0.28
ARHGEF39-205ENST00000490638 FAM13BQ9NYF5 915 aa16.82■□□□□ 0.28
ARHGEF39-205ENST00000490638 HMG20BQ9P0W2 317 aa16.82■□□□□ 0.28
ARHGEF39-205ENST00000490638 DENND2AQ9ULE3 1009 aa16.82■□□□□ 0.28
ARHGEF39-205ENST00000490638 TSPY3P0CV98 308 aa16.82■□□□□ 0.28
ARHGEF39-205ENST00000490638 TSPY8P0CW00 308 aa16.82■□□□□ 0.28
ARHGEF39-205ENST00000490638 BMP2KQ9NSY1 1161 aaPredicted RBP16.82■□□□□ 0.28
ARHGEF39-205ENST00000490638 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.82■□□□□ 0.28
ARHGEF39-205ENST00000490638 MCM5P33992 734 aa16.82■□□□□ 0.28
ARHGEF39-205ENST00000490638 IL6STP40189 918 aaPredicted RBP16.82■□□□□ 0.28
ARHGEF39-205ENST00000490638 NFKBIBQ15653 356 aa16.82■□□□□ 0.28
ARHGEF39-205ENST00000490638 CAVIN1Q6NZI2 390 aaKnown RBP16.82■□□□□ 0.28
ARHGEF39-205ENST00000490638 PIGBQ92521 554 aa16.82■□□□□ 0.28
ARHGEF39-205ENST00000490638 SETD1BQ9UPS6 1966 aaKnown RBP16.81■□□□□ 0.28
ARHGEF39-205ENST00000490638 CHMP4BP1P59074 171 aa16.81■□□□□ 0.28
ARHGEF39-205ENST00000490638 PDIA4P13667 645 aaKnown RBP16.81■□□□□ 0.28
ARHGEF39-205ENST00000490638 SMC5Q8IY18 1101 aa16.81■□□□□ 0.28
ARHGEF39-205ENST00000490638 TCEANC2Q96MN5 208 aa16.81■□□□□ 0.28
ARHGEF39-205ENST00000490638 HMGN5P82970 282 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms