RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 PCNTO95613 3336 aa13.38□□□□□ -0.27
TTC28-207ENST00000490475 LAMB2P55268 1798 aa13.38□□□□□ -0.27
TTC28-207ENST00000490475 TCERG1O14776 1098 aaKnown RBP13.38□□□□□ -0.27
TTC28-207ENST00000490475 HCLS1P14317 486 aaPredicted RBP13.38□□□□□ -0.27
TTC28-207ENST00000490475 GOLGA2Q08379 1002 aa13.38□□□□□ -0.27
TTC28-207ENST00000490475 ZNF853P0CG23 659 aa13.37□□□□□ -0.27
TTC28-207ENST00000490475 KIAA2012Q0VF49 1180 aa13.37□□□□□ -0.27
TTC28-207ENST00000490475 SF3B3Q15393 1217 aaKnown RBP13.37□□□□□ -0.27
TTC28-207ENST00000490475 AOC3Q16853 763 aa13.37□□□□□ -0.27
TTC28-207ENST00000490475 C3orf67Q6ZVT6 689 aa13.37□□□□□ -0.27
TTC28-207ENST00000490475 ISCA1Q9BUE6 129 aa13.37□□□□□ -0.27
TTC28-207ENST00000490475 ADARB2Q9NS39 739 aaKnown RBP13.37□□□□□ -0.27
TTC28-207ENST00000490475 MBIPQ9NS73 344 aa13.37□□□□□ -0.27
TTC28-207ENST00000490475 MKRN1Q9UHC7 482 aaKnown RBP13.37□□□□□ -0.27
TTC28-207ENST00000490475 DDX58O95786 925 aaKnown RBP13.36□□□□□ -0.27
TTC28-207ENST00000490475 SCNN1DP51172 638 aa13.36□□□□□ -0.27
TTC28-207ENST00000490475 KRT24Q2M2I5 525 aa13.36□□□□□ -0.27
TTC28-207ENST00000490475 CIAPIN1Q6FI81 312 aa13.36□□□□□ -0.27
TTC28-207ENST00000490475 RIC3Q7Z5B4 369 aa13.36□□□□□ -0.27
TTC28-207ENST00000490475 AIDAQ96BJ3 306 aa13.36□□□□□ -0.27
TTC28-207ENST00000490475 DEFB115Q30KQ5 88 aa13.35□□□□□ -0.27
TTC28-207ENST00000490475 COL13A1Q5TAT6 717 aaPredicted RBP13.35□□□□□ -0.27
TTC28-207ENST00000490475 CCDC30Q5VVM6 783 aa13.35□□□□□ -0.27
TTC28-207ENST00000490475 MAP1SQ66K74 1059 aaPredicted RBP13.35□□□□□ -0.27
TTC28-207ENST00000490475 TNS4Q8IZW8 715 aa13.35□□□□□ -0.27
TTC28-207ENST00000490475 MIER1Q8N108 512 aa13.35□□□□□ -0.27
TTC28-207ENST00000490475 EYA3Q99504 573 aa13.35□□□□□ -0.27
TTC28-207ENST00000490475 GPRC5DQ9NZD1 345 aa13.35□□□□□ -0.27
TTC28-207ENST00000490475 SALL2Q9Y467 1007 aaPredicted RBP13.35□□□□□ -0.27
TTC28-207ENST00000490475 LRRC37AA6NMS7 1700 aa13.34□□□□□ -0.27
TTC28-207ENST00000490475 RASSF10A6NK89 507 aa13.34□□□□□ -0.27
TTC28-207ENST00000490475 EPS15P42566 896 aa13.34□□□□□ -0.27
TTC28-207ENST00000490475 CXCL9Q07325 125 aa13.34□□□□□ -0.27
TTC28-207ENST00000490475 ZBTB38Q8NAP3 1195 aaPredicted RBP13.34□□□□□ -0.27
TTC28-207ENST00000490475 CCDC191Q8NCU4 936 aa13.34□□□□□ -0.27
TTC28-207ENST00000490475 ZC3H15Q8WU90 426 aaKnown RBP13.34□□□□□ -0.27
TTC28-207ENST00000490475 FAM89AQ96GI7 184 aa13.34□□□□□ -0.27
TTC28-207ENST00000490475 BCL2L13Q9BXK5 485 aa13.34□□□□□ -0.27
TTC28-207ENST00000490475 COL4A5P29400 1685 aa13.34□□□□□ -0.27
TTC28-207ENST00000490475 TRPM7Q96QT4 1865 aa13.33□□□□□ -0.27
TTC28-207ENST00000490475 DDX60Q8IY21 1712 aaKnown RBP13.33□□□□□ -0.27
TTC28-207ENST00000490475 IRS4O14654 1257 aaPredicted RBP13.33□□□□□ -0.28
TTC28-207ENST00000490475 ECE1P42892 770 aa13.33□□□□□ -0.28
TTC28-207ENST00000490475 MAP2K1Q02750 393 aaPredicted RBP13.33□□□□□ -0.28
TTC28-207ENST00000490475 WASHC4Q2M389 1173 aa13.33□□□□□ -0.28
TTC28-207ENST00000490475 NCBP3Q53F19 620 aaKnown RBP13.33□□□□□ -0.28
TTC28-207ENST00000490475 ABT1Q9ULW3 272 aaKnown RBP13.33□□□□□ -0.28
TTC28-207ENST00000490475 ATP5J2-PTCD1G3V325 749 aa13.32□□□□□ -0.28
TTC28-207ENST00000490475 H7C1D1 291 aa13.32□□□□□ -0.28
TTC28-207ENST00000490475 CCER2I3L3R5 266 aa13.32□□□□□ -0.28
TTC28-207ENST00000490475 CTCFP49711 727 aaPredicted RBP13.32□□□□□ -0.28
TTC28-207ENST00000490475 VEGFBP49765 207 aa13.32□□□□□ -0.28
TTC28-207ENST00000490475 RPS8P62241 208 aaKnown RBP13.32□□□□□ -0.28
TTC28-207ENST00000490475 CCDC27Q2M243 656 aa13.32□□□□□ -0.28
TTC28-207ENST00000490475 DPF2Q92785 391 aa13.32□□□□□ -0.28
TTC28-207ENST00000490475 STK31Q9BXU1 1019 aa13.32□□□□□ -0.28
TTC28-207ENST00000490475 PRDM10Q9NQV6 1147 aa13.32□□□□□ -0.28
TTC28-207ENST00000490475 NSFL1CQ9UNZ2 370 aaKnown RBP13.32□□□□□ -0.28
TTC28-207ENST00000490475 PCCAP05165 728 aaPredicted RBP13.31□□□□□ -0.28
TTC28-207ENST00000490475 RPS12P25398 132 aaKnown RBP13.31□□□□□ -0.28
TTC28-207ENST00000490475 CCDC152Q4G0S7 254 aa13.31□□□□□ -0.28
TTC28-207ENST00000490475 WWC1Q8IX03 1113 aa13.31□□□□□ -0.28
TTC28-207ENST00000490475 CWC25Q9NXE8 425 aaPredicted RBP13.31□□□□□ -0.28
TTC28-207ENST00000490475 LTBP1Q14766 1721 aa13.3□□□□□ -0.28
TTC28-207ENST00000490475 C6orf229H3BNL8 230 aa13.3□□□□□ -0.28
TTC28-207ENST00000490475 PDE8AO60658 829 aa13.3□□□□□ -0.28
TTC28-207ENST00000490475 GMPSP49915 693 aaPredicted RBP13.3□□□□□ -0.28
TTC28-207ENST00000490475 NEXNQ0ZGT2 675 aa13.3□□□□□ -0.28
TTC28-207ENST00000490475 BEGAINQ9BUH8 593 aa13.3□□□□□ -0.28
TTC28-207ENST00000490475 PGAP2Q9UHJ9 254 aa13.3□□□□□ -0.28
TTC28-207ENST00000490475 TAF1P21675 1872 aa13.29□□□□□ -0.28
TTC28-207ENST00000490475 CACNA1FO60840 1977 aa13.29□□□□□ -0.28
TTC28-207ENST00000490475 G3V3G9 751 aa13.29□□□□□ -0.28
TTC28-207ENST00000490475 RAD17O75943 681 aa13.29□□□□□ -0.28
TTC28-207ENST00000490475 DCAF8Q5TAQ9 597 aa13.29□□□□□ -0.28
TTC28-207ENST00000490475 CDC37L1Q7L3B6 337 aa13.29□□□□□ -0.28
TTC28-207ENST00000490475 CELF1Q92879 486 aaKnown RBP13.29□□□□□ -0.28
TTC28-207ENST00000490475 HHIPL1Q96JK4 782 aa13.29□□□□□ -0.28
TTC28-207ENST00000490475 METTL22Q9BUU2 404 aaPredicted RBP13.29□□□□□ -0.28
TTC28-207ENST00000490475 ZC3H12CQ9C0D7 883 aaKnown RBP13.29□□□□□ -0.28
TTC28-207ENST00000490475 WBP1LQ9NX94 342 aa13.29□□□□□ -0.28
TTC28-207ENST00000490475 PODXL2Q9NZ53 605 aa13.29□□□□□ -0.28
TTC28-207ENST00000490475 CNOT7Q9UIV1 285 aaKnown RBP13.29□□□□□ -0.28
TTC28-207ENST00000490475 IL16Q14005 1332 aa13.29□□□□□ -0.28
TTC28-207ENST00000490475 WDR33Q9C0J8 1336 aaKnown RBP13.29□□□□□ -0.28
TTC28-207ENST00000490475 ELL2O00472 640 aaPredicted RBP13.28□□□□□ -0.28
TTC28-207ENST00000490475 CDC5LQ99459 802 aaKnown RBP13.28□□□□□ -0.28
TTC28-207ENST00000490475 MYD88Q99836 296 aa13.28□□□□□ -0.28
TTC28-207ENST00000490475 PHAXQ9H814 394 aaKnown RBP13.28□□□□□ -0.28
TTC28-207ENST00000490475 DUOX1Q9NRD9 1551 aa13.28□□□□□ -0.28
TTC28-207ENST00000490475 FOXN1O15353 648 aa13.27□□□□□ -0.29
TTC28-207ENST00000490475 MAP2K2P36507 400 aa13.27□□□□□ -0.29
TTC28-207ENST00000490475 RTL5Q5HYW3 569 aaPredicted RBP13.27□□□□□ -0.29
TTC28-207ENST00000490475 KSR2Q6VAB6 950 aa13.27□□□□□ -0.29
TTC28-207ENST00000490475 ANKRD18AQ8IVF6 992 aa13.27□□□□□ -0.29
TTC28-207ENST00000490475 C8orf58Q8NAV2 365 aa13.27□□□□□ -0.29
TTC28-207ENST00000490475 ANKIB1Q9P2G1 1089 aa13.27□□□□□ -0.29
TTC28-207ENST00000490475 GGA1Q9UJY5 639 aa13.27□□□□□ -0.29
TTC28-207ENST00000490475 TLL2Q9Y6L7 1015 aa13.27□□□□□ -0.29
TTC28-207ENST00000490475 YDJCA8MPS7 323 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms