RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 LAMB2P55268 1798 aa21.59■■□□□ 1.05
RAPGEF3-212ENST00000490387 PLIN1O60240 522 aa21.59■■□□□ 1.05
RAPGEF3-212ENST00000490387 ALDH1L1O75891 902 aa21.59■■□□□ 1.05
RAPGEF3-212ENST00000490387 RLBP1P12271 317 aa21.59■■□□□ 1.05
RAPGEF3-212ENST00000490387 FKBP4Q02790 459 aaKnown RBP eCLIP21.59■■□□□ 1.05
RAPGEF3-212ENST00000490387 INTS3Q68E01 1043 aaKnown RBP21.59■■□□□ 1.05
RAPGEF3-212ENST00000490387 OLFM4Q6UX06 510 aa21.59■■□□□ 1.05
RAPGEF3-212ENST00000490387 RTKN2Q8IZC4 609 aa21.59■■□□□ 1.05
RAPGEF3-212ENST00000490387 WDR90Q96KV7 1748 aa21.59■■□□□ 1.05
RAPGEF3-212ENST00000490387 CWC25Q9NXE8 425 aaPredicted RBP21.59■■□□□ 1.05
RAPGEF3-212ENST00000490387 CEP350Q5VT06 3117 aa21.58■■□□□ 1.05
RAPGEF3-212ENST00000490387 VEGFAP15692 232 aaPredicted RBP21.58■■□□□ 1.05
RAPGEF3-212ENST00000490387 GCKRQ14397 625 aa21.58■■□□□ 1.05
RAPGEF3-212ENST00000490387 CLUAP1Q96AJ1 413 aa21.58■■□□□ 1.05
RAPGEF3-212ENST00000490387 SRCIN1Q9C0H9 1055 aa21.58■■□□□ 1.05
RAPGEF3-212ENST00000490387 DDX60Q8IY21 1712 aaKnown RBP21.58■■□□□ 1.04
RAPGEF3-212ENST00000490387 CCT4P50991 539 aaKnown RBP21.57■■□□□ 1.04
RAPGEF3-212ENST00000490387 APLP1P51693 650 aa21.57■■□□□ 1.04
RAPGEF3-212ENST00000490387 RRP1P56182 461 aaKnown RBP21.57■■□□□ 1.04
RAPGEF3-212ENST00000490387 FSTL1Q12841 308 aa21.57■■□□□ 1.04
RAPGEF3-212ENST00000490387 DZIP1LQ8IYY4 767 aaKnown RBP21.57■■□□□ 1.04
RAPGEF3-212ENST00000490387 RBM17Q96I25 401 aaKnown RBP21.57■■□□□ 1.04
RAPGEF3-212ENST00000490387 HOXA10P31260 410 aaPredicted RBP21.56■■□□□ 1.04
RAPGEF3-212ENST00000490387 NLRP3Q96P20 1036 aa21.56■■□□□ 1.04
RAPGEF3-212ENST00000490387 ZNF277Q9NRM2 450 aaPredicted RBP21.56■■□□□ 1.04
RAPGEF3-212ENST00000490387 PCCAP05165 728 aaPredicted RBP21.55■■□□□ 1.04
RAPGEF3-212ENST00000490387 CASP7P55210 303 aa21.55■■□□□ 1.04
RAPGEF3-212ENST00000490387 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.55■■□□□ 1.04
RAPGEF3-212ENST00000490387 ZBTB38Q8NAP3 1195 aaPredicted RBP21.55■■□□□ 1.04
RAPGEF3-212ENST00000490387 SMC1BQ8NDV3 1235 aa21.55■■□□□ 1.04
RAPGEF3-212ENST00000490387 UTYO14607 1347 aa21.55■■□□□ 1.04
RAPGEF3-212ENST00000490387 H7C1W4 665 aa21.54■■□□□ 1.04
RAPGEF3-212ENST00000490387 PDE3AQ14432 1141 aa21.54■■□□□ 1.04
RAPGEF3-212ENST00000490387 CC2D2BQ6DHV5 1058 aa21.54■■□□□ 1.04
RAPGEF3-212ENST00000490387 C3orf67Q6ZVT6 689 aa21.54■■□□□ 1.04
RAPGEF3-212ENST00000490387 SYNE4Q8N205 404 aa21.54■■□□□ 1.04
RAPGEF3-212ENST00000490387 TMEM57Q8N5G2 664 aa21.54■■□□□ 1.04
RAPGEF3-212ENST00000490387 PANK1Q8TE04 598 aa21.54■■□□□ 1.04
RAPGEF3-212ENST00000490387 CRAMP1Q96RY5 1269 aa21.54■■□□□ 1.04
RAPGEF3-212ENST00000490387 TRMT112Q9UI30 125 aaKnown RBP21.54■■□□□ 1.04
RAPGEF3-212ENST00000490387 SH3TC1Q8TE82 1336 aa21.54■■□□□ 1.04
RAPGEF3-212ENST00000490387 PPEF1O14829 653 aaPredicted RBP21.53■■□□□ 1.04
RAPGEF3-212ENST00000490387 MS4A1P11836 297 aa21.53■■□□□ 1.04
RAPGEF3-212ENST00000490387 SLC10A5Q5PT55 438 aa21.53■■□□□ 1.04
RAPGEF3-212ENST00000490387 C20orf194Q5TEA3 1177 aa21.53■■□□□ 1.04
RAPGEF3-212ENST00000490387 FTSJ3Q8IY81 847 aaKnown RBP21.53■■□□□ 1.04
RAPGEF3-212ENST00000490387 FAM89AQ96GI7 184 aa21.53■■□□□ 1.04
RAPGEF3-212ENST00000490387 CDHR2Q9BYE9 1310 aa21.53■■□□□ 1.04
RAPGEF3-212ENST00000490387 GRM8O00222 908 aa21.52■■□□□ 1.04
RAPGEF3-212ENST00000490387 DDNO94850 711 aaPredicted RBP21.52■■□□□ 1.04
RAPGEF3-212ENST00000490387 IARSP41252 1262 aaKnown RBP21.52■■□□□ 1.04
RAPGEF3-212ENST00000490387 PSMD1Q99460 953 aa21.52■■□□□ 1.04
RAPGEF3-212ENST00000490387 USP44Q9H0E7 712 aa21.52■■□□□ 1.04
RAPGEF3-212ENST00000490387 MYH3P11055 1940 aa21.51■■□□□ 1.03
RAPGEF3-212ENST00000490387 POTECB2RU33 542 aa21.51■■□□□ 1.03
RAPGEF3-212ENST00000490387 SNED1Q8TER0 1413 aa21.51■■□□□ 1.03
RAPGEF3-212ENST00000490387 HCLS1P14317 486 aaPredicted RBP21.5■■□□□ 1.03
RAPGEF3-212ENST00000490387 GRIPAP1Q4V328 841 aa21.5■■□□□ 1.03
RAPGEF3-212ENST00000490387 UBE3BQ7Z3V4 1068 aa21.5■■□□□ 1.03
RAPGEF3-212ENST00000490387 JARID2Q92833 1246 aaPredicted RBP21.5■■□□□ 1.03
RAPGEF3-212ENST00000490387 TMX4Q9H1E5 349 aaPredicted RBP21.5■■□□□ 1.03
RAPGEF3-212ENST00000490387 SUPT16HQ9Y5B9 1047 aaKnown RBP21.5■■□□□ 1.03
RAPGEF3-212ENST00000490387 NBPF7P0C2Y1 421 aaPredicted RBP21.49■■□□□ 1.03
RAPGEF3-212ENST00000490387 SCN4AP35499 1836 aa21.48■■□□□ 1.03
RAPGEF3-212ENST00000490387 IRS4O14654 1257 aaPredicted RBP21.48■■□□□ 1.03
RAPGEF3-212ENST00000490387 CENPBP07199 599 aaPredicted RBP21.48■■□□□ 1.03
RAPGEF3-212ENST00000490387 RTL5Q5HYW3 569 aaPredicted RBP21.48■■□□□ 1.03
RAPGEF3-212ENST00000490387 PLA2G12BQ9BX93 195 aa21.48■■□□□ 1.03
RAPGEF3-212ENST00000490387 C9orf78Q9NZ63 289 aaPredicted RBP21.48■■□□□ 1.03
RAPGEF3-212ENST00000490387 ZNF541Q9H0D2 1346 aa21.48■■□□□ 1.03
RAPGEF3-212ENST00000490387 MVPQ14764 893 aaKnown RBP21.47■■□□□ 1.03
RAPGEF3-212ENST00000490387 JDP2Q8WYK2 163 aa21.47■■□□□ 1.03
RAPGEF3-212ENST00000490387 MEIS3Q99687 375 aa21.47■■□□□ 1.03
RAPGEF3-212ENST00000490387 IQCA1LA6NCM1 817 aa21.46■■□□□ 1.03
RAPGEF3-212ENST00000490387 DDX46Q7L014 1031 aaKnown RBP21.46■■□□□ 1.03
RAPGEF3-212ENST00000490387 SLC51AQ86UW1 340 aa21.46■■□□□ 1.03
RAPGEF3-212ENST00000490387 ITPRIPQ8IWB1 547 aa21.46■■□□□ 1.03
RAPGEF3-212ENST00000490387 KAZALD1Q96I82 304 aa21.46■■□□□ 1.03
RAPGEF3-212ENST00000490387 COG6Q9Y2V7 657 aa21.46■■□□□ 1.03
RAPGEF3-212ENST00000490387 ZBTB7BO15156 539 aaPredicted RBP21.45■■□□□ 1.02
RAPGEF3-212ENST00000490387 L3MBTL3Q96JM7 780 aaPredicted RBP21.45■■□□□ 1.02
RAPGEF3-212ENST00000490387 ATP6V0A2Q9Y487 856 aa21.45■■□□□ 1.02
RAPGEF3-212ENST00000490387 TAF1P21675 1872 aa21.45■■□□□ 1.02
RAPGEF3-212ENST00000490387 FZD9O00144 591 aa21.44■■□□□ 1.02
RAPGEF3-212ENST00000490387 PDE8AO60658 829 aa21.44■■□□□ 1.02
RAPGEF3-212ENST00000490387 HTRA3P83110 453 aa21.44■■□□□ 1.02
RAPGEF3-212ENST00000490387 LARGE2Q8N3Y3 721 aa21.44■■□□□ 1.02
RAPGEF3-212ENST00000490387 SUCLG2Q96I99 432 aa21.44■■□□□ 1.02
RAPGEF3-212ENST00000490387 BBOX1O75936 387 aa21.43■■□□□ 1.02
RAPGEF3-212ENST00000490387 HSP90B1P14625 803 aaKnown RBP21.43■■□□□ 1.02
RAPGEF3-212ENST00000490387 FOXO4P98177 505 aa21.43■■□□□ 1.02
RAPGEF3-212ENST00000490387 GRAPQ13588 217 aa21.43■■□□□ 1.02
RAPGEF3-212ENST00000490387 SF3B3Q15393 1217 aaKnown RBP21.43■■□□□ 1.02
RAPGEF3-212ENST00000490387 EPHA10Q5JZY3 1008 aa21.43■■□□□ 1.02
RAPGEF3-212ENST00000490387 GRAPLQ8TC17 118 aaPredicted RBP21.43■■□□□ 1.02
RAPGEF3-212ENST00000490387 GNAI3P08754 354 aa21.42■■□□□ 1.02
RAPGEF3-212ENST00000490387 COL4A5P29400 1685 aa21.42■■□□□ 1.02
RAPGEF3-212ENST00000490387 EIF6P56537 245 aaKnown RBP21.42■■□□□ 1.02
RAPGEF3-212ENST00000490387 DDX19BQ9UMR2 479 aa21.42■■□□□ 1.02
RAPGEF3-212ENST00000490387 PPIP5K2O43314 1243 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms