RNA–Protein interactions for RNA: ENST00000490117.5

CPA4-208, Transcript of carboxypeptidase A4, humanhuman

TSL 2

Gene CPA4, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-208ENST00000490117 BRCA1P38398 1863 aaKnown RBP9.3□□□□□ -0.92
CPA4-208ENST00000490117 APBB1O00213 710 aa9.3□□□□□ -0.92
CPA4-208ENST00000490117 CAPN15O75808 1086 aa9.3□□□□□ -0.92
CPA4-208ENST00000490117 GTF2E1P29083 439 aaPredicted RBP9.3□□□□□ -0.92
CPA4-208ENST00000490117 FAM161AQ3B820 660 aa9.3□□□□□ -0.92
CPA4-208ENST00000490117 ERICH6BQ5W0A0 696 aa9.3□□□□□ -0.92
CPA4-208ENST00000490117 LMBR1LQ6UX01 489 aa9.3□□□□□ -0.92
CPA4-208ENST00000490117 CNBD1Q8NA66 436 aa9.3□□□□□ -0.92
CPA4-208ENST00000490117 KLHDC4Q8TBB5 520 aa9.3□□□□□ -0.92
CPA4-208ENST00000490117 BCL11AQ9H165 835 aa9.3□□□□□ -0.92
CPA4-208ENST00000490117 CHMP4BQ9H444 224 aaKnown RBP9.3□□□□□ -0.92
CPA4-208ENST00000490117 FOXD4L1Q9NU39 408 aa9.3□□□□□ -0.92
CPA4-208ENST00000490117 PA2G4Q9UQ80 394 aaKnown RBP9.3□□□□□ -0.92
CPA4-208ENST00000490117 ATF5Q9Y2D1 282 aaPredicted RBP9.3□□□□□ -0.92
CPA4-208ENST00000490117 MYH13Q9UKX3 1938 aa9.3□□□□□ -0.92
CPA4-208ENST00000490117 ARAP2Q8WZ64 1704 aa9.29□□□□□ -0.92
CPA4-208ENST00000490117 RGL2O15211 777 aa9.29□□□□□ -0.92
CPA4-208ENST00000490117 SRGAP3O43295 1099 aa9.29□□□□□ -0.92
CPA4-208ENST00000490117 PDE8AO60658 829 aa9.29□□□□□ -0.92
CPA4-208ENST00000490117 CTSWP56202 376 aa9.29□□□□□ -0.92
CPA4-208ENST00000490117 ATP8B2P98198 1209 aa9.29□□□□□ -0.92
CPA4-208ENST00000490117 NLGN1Q8N2Q7 840 aa9.29□□□□□ -0.92
CPA4-208ENST00000490117 ZNF594Q96JF6 807 aaPredicted RBP9.29□□□□□ -0.92
CPA4-208ENST00000490117 NYXQ9GZU5 481 aa9.29□□□□□ -0.92
CPA4-208ENST00000490117 PARP3Q9Y6F1 533 aa9.29□□□□□ -0.92
CPA4-208ENST00000490117 SLX4Q8IY92 1834 aa9.28□□□□□ -0.92
CPA4-208ENST00000490117 LRRC37AA6NMS7 1700 aa9.28□□□□□ -0.92
CPA4-208ENST00000490117 RABL6Q3YEC7 729 aaPredicted RBP9.28□□□□□ -0.92
CPA4-208ENST00000490117 SLC51AQ86UW1 340 aa9.28□□□□□ -0.92
CPA4-208ENST00000490117 SIL1Q9H173 461 aa9.28□□□□□ -0.92
CPA4-208ENST00000490117 GREM2Q9H772 168 aa9.28□□□□□ -0.92
CPA4-208ENST00000490117 SEC31BQ9NQW1 1179 aa9.28□□□□□ -0.92
CPA4-208ENST00000490117 EXOC6BQ9Y2D4 811 aa9.28□□□□□ -0.92
CPA4-208ENST00000490117 KDM2BQ8NHM5 1336 aa9.28□□□□□ -0.92
CPA4-208ENST00000490117 RFX5P48382 616 aaPredicted RBP9.27□□□□□ -0.93
CPA4-208ENST00000490117 ST5P78524 1137 aa9.27□□□□□ -0.93
CPA4-208ENST00000490117 AAMPQ13685 434 aa9.27□□□□□ -0.93
CPA4-208ENST00000490117 POLA2Q14181 598 aa9.27□□□□□ -0.93
CPA4-208ENST00000490117 TPTE2Q6XPS3 522 aa9.27□□□□□ -0.93
CPA4-208ENST00000490117 RPAP2Q8IXW5 612 aaPredicted RBP9.27□□□□□ -0.93
CPA4-208ENST00000490117 TTLL11Q8NHH1 800 aa9.27□□□□□ -0.93
CPA4-208ENST00000490117 SSH3Q8TE77 659 aa9.27□□□□□ -0.93
CPA4-208ENST00000490117 PLA2G12BQ9BX93 195 aa9.27□□□□□ -0.93
CPA4-208ENST00000490117 RIC1Q4ADV7 1423 aa9.27□□□□□ -0.93
CPA4-208ENST00000490117 MYO5AQ9Y4I1 1855 aaKnown RBP9.26□□□□□ -0.93
CPA4-208ENST00000490117 C10orf71Q711Q0 1435 aa9.26□□□□□ -0.93
CPA4-208ENST00000490117 SMARCA5O60264 1052 aaPredicted RBP9.26□□□□□ -0.93
CPA4-208ENST00000490117 MTX1Q13505 466 aa9.26□□□□□ -0.93
CPA4-208ENST00000490117 HDAC1Q13547 482 aaPredicted RBP9.26□□□□□ -0.93
CPA4-208ENST00000490117 KLHL34Q8N239 644 aa9.26□□□□□ -0.93
CPA4-208ENST00000490117 PUS3Q9BZE2 481 aaKnown RBP9.26□□□□□ -0.93
CPA4-208ENST00000490117 RWDD1Q9H446 243 aaPredicted RBP9.26□□□□□ -0.93
CPA4-208ENST00000490117 HDAC5Q9UQL6 1122 aa9.26□□□□□ -0.93
CPA4-208ENST00000490117 CCDC88AQ3V6T2 1871 aa9.25□□□□□ -0.93
CPA4-208ENST00000490117 HMMRO75330 724 aa9.25□□□□□ -0.93
CPA4-208ENST00000490117 SURF6O75683 361 aaKnown RBP9.25□□□□□ -0.93
CPA4-208ENST00000490117 CSF1RP07333 972 aa9.25□□□□□ -0.93
CPA4-208ENST00000490117 ITGA6P23229 1130 aa9.25□□□□□ -0.93
CPA4-208ENST00000490117 TAF7LQ5H9L4 462 aa9.25□□□□□ -0.93
CPA4-208ENST00000490117 SLC10A5Q5PT55 438 aa9.25□□□□□ -0.93
CPA4-208ENST00000490117 SLC16A10Q8TF71 515 aa9.25□□□□□ -0.93
CPA4-208ENST00000490117 NLRP3Q96P20 1036 aa9.25□□□□□ -0.93
CPA4-208ENST00000490117 MTFR1LQ9H019 292 aa9.25□□□□□ -0.93
CPA4-208ENST00000490117 PDZRN3Q9UPQ7 1066 aa9.25□□□□□ -0.93
CPA4-208ENST00000490117 LTBP1Q14766 1721 aa9.25□□□□□ -0.93
CPA4-208ENST00000490117 ANKRD18BA2A2Z9 1011 aa9.24□□□□□ -0.93
CPA4-208ENST00000490117 DSG3P32926 999 aa9.24□□□□□ -0.93
CPA4-208ENST00000490117 PTPN12Q05209 780 aaKnown RBP9.24□□□□□ -0.93
CPA4-208ENST00000490117 IFIT5Q13325 482 aaKnown RBP9.24□□□□□ -0.93
CPA4-208ENST00000490117 OS9Q13438 667 aaPredicted RBP9.24□□□□□ -0.93
CPA4-208ENST00000490117 CCDC57Q2TAC2 916 aa9.24□□□□□ -0.93
CPA4-208ENST00000490117 CCDC152Q4G0S7 254 aa9.24□□□□□ -0.93
CPA4-208ENST00000490117 LRRC24Q50LG9 513 aa9.24□□□□□ -0.93
CPA4-208ENST00000490117 CENPQQ7L2Z9 268 aaPredicted RBP9.24□□□□□ -0.93
CPA4-208ENST00000490117 CELF1Q92879 486 aaKnown RBP9.24□□□□□ -0.93
CPA4-208ENST00000490117 DCTPP1Q9H773 170 aa9.24□□□□□ -0.93
CPA4-208ENST00000490117 WWC3Q9ULE0 1092 aa9.24□□□□□ -0.93
CPA4-208ENST00000490117 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.24□□□□□ -0.93
CPA4-208ENST00000490117 CHRNA5P30532 468 aa9.23□□□□□ -0.93
CPA4-208ENST00000490117 SF3B3Q15393 1217 aaKnown RBP9.23□□□□□ -0.93
CPA4-208ENST00000490117 ANKRD45Q5TZF3 282 aa9.23□□□□□ -0.93
CPA4-208ENST00000490117 C2CD5Q86YS7 1000 aa9.23□□□□□ -0.93
CPA4-208ENST00000490117 SMC5Q8IY18 1101 aa9.23□□□□□ -0.93
CPA4-208ENST00000490117 RPGRQ92834 1020 aaKnown RBP9.23□□□□□ -0.93
CPA4-208ENST00000490117 LNPKQ9C0E8 428 aa9.23□□□□□ -0.93
CPA4-208ENST00000490117 IL1RAPL2Q9NP60 686 aa9.23□□□□□ -0.93
CPA4-208ENST00000490117 ARFGEF1Q9Y6D6 1849 aa9.23□□□□□ -0.93
CPA4-208ENST00000490117 MYH7P12883 1935 aa9.23□□□□□ -0.93
CPA4-208ENST00000490117 RTL9Q8NET4 1388 aa9.23□□□□□ -0.93
CPA4-208ENST00000490117 SOCS7O14512 581 aa9.22□□□□□ -0.93
CPA4-208ENST00000490117 SASH1O94885 1247 aa9.22□□□□□ -0.93
CPA4-208ENST00000490117 PDE4AP27815 886 aa9.22□□□□□ -0.93
CPA4-208ENST00000490117 POLD1P28340 1107 aa9.22□□□□□ -0.93
CPA4-208ENST00000490117 PTGER2P43116 358 aa9.22□□□□□ -0.93
CPA4-208ENST00000490117 G3BP1Q13283 466 aaKnown RBP eCLIP9.22□□□□□ -0.93
CPA4-208ENST00000490117 ATG9AQ7Z3C6 839 aa9.22□□□□□ -0.93
CPA4-208ENST00000490117 HELBQ8NG08 1087 aaPredicted RBP9.22□□□□□ -0.93
CPA4-208ENST00000490117 SGIP1Q9BQI5 828 aa9.22□□□□□ -0.93
CPA4-208ENST00000490117 COPRSQ9NQ92 184 aa9.22□□□□□ -0.93
CPA4-208ENST00000490117 PPP1R1BQ9UD71 204 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms