RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 H0YIN7 160 aa15.67■□□□□ 0.1
HDAC1-210ENST00000490081 HCLS1P14317 486 aaPredicted RBP15.67■□□□□ 0.1
HDAC1-210ENST00000490081 NPR1P16066 1061 aa15.67■□□□□ 0.1
HDAC1-210ENST00000490081 YBX3P16989 372 aaKnown RBP eCLIP15.67■□□□□ 0.1
HDAC1-210ENST00000490081 STYK1Q6J9G0 422 aa15.67■□□□□ 0.1
HDAC1-210ENST00000490081 TTLL11Q8NHH1 800 aa15.67■□□□□ 0.1
HDAC1-210ENST00000490081 MEIS3Q99687 375 aa15.67■□□□□ 0.1
HDAC1-210ENST00000490081 COG6Q9Y2V7 657 aa15.67■□□□□ 0.1
HDAC1-210ENST00000490081 KCNA3P22001 575 aa15.66■□□□□ 0.1
HDAC1-210ENST00000490081 CTSWP56202 376 aa15.66■□□□□ 0.1
HDAC1-210ENST00000490081 MTX1Q13505 466 aa15.66■□□□□ 0.1
HDAC1-210ENST00000490081 MASTLQ96GX5 879 aa15.66■□□□□ 0.1
HDAC1-210ENST00000490081 CRAMP1Q96RY5 1269 aa15.66■□□□□ 0.1
HDAC1-210ENST00000490081 TNRC6CQ9HCJ0 1690 aaKnown RBP15.66■□□□□ 0.1
HDAC1-210ENST00000490081 BRCA1P38398 1863 aaKnown RBP15.65■□□□□ 0.1
HDAC1-210ENST00000490081 GNAI2P04899 355 aa15.65■□□□□ 0.1
HDAC1-210ENST00000490081 ALDH1B1P30837 517 aa15.65■□□□□ 0.1
HDAC1-210ENST00000490081 CCDC152Q4G0S7 254 aa15.65■□□□□ 0.1
HDAC1-210ENST00000490081 RTL5Q5HYW3 569 aaPredicted RBP15.65■□□□□ 0.1
HDAC1-210ENST00000490081 JARID2Q92833 1246 aaPredicted RBP15.65■□□□□ 0.1
HDAC1-210ENST00000490081 SUCLG2Q96I99 432 aa15.65■□□□□ 0.1
HDAC1-210ENST00000490081 C3orf67Q6ZVT6 689 aa15.64■□□□□ 0.09
HDAC1-210ENST00000490081 C2CD5Q86YS7 1000 aa15.64■□□□□ 0.09
HDAC1-210ENST00000490081 CCDC24Q8N4L8 307 aa15.64■□□□□ 0.09
HDAC1-210ENST00000490081 RBM17Q96I25 401 aaKnown RBP15.64■□□□□ 0.09
HDAC1-210ENST00000490081 BBOX1O75936 387 aa15.63■□□□□ 0.09
HDAC1-210ENST00000490081 EPHA10Q5JZY3 1008 aa15.63■□□□□ 0.09
HDAC1-210ENST00000490081 TMC4Q7Z404 712 aa15.63■□□□□ 0.09
HDAC1-210ENST00000490081 ANKRD44Q8N8A2 993 aa15.63■□□□□ 0.09
HDAC1-210ENST00000490081 CNKSR1Q969H4 720 aa15.63■□□□□ 0.09
HDAC1-210ENST00000490081 BICC1Q9H694 974 aaKnown RBP15.63■□□□□ 0.09
HDAC1-210ENST00000490081 COL11A2P13942 1736 aaPredicted RBP15.63■□□□□ 0.09
HDAC1-210ENST00000490081 DPEP1P16444 411 aa15.62■□□□□ 0.09
HDAC1-210ENST00000490081 LMBR1LQ6UX01 489 aa15.62■□□□□ 0.09
HDAC1-210ENST00000490081 DDX46Q7L014 1031 aaKnown RBP15.62■□□□□ 0.09
HDAC1-210ENST00000490081 RPAP2Q8IXW5 612 aaPredicted RBP15.62■□□□□ 0.09
HDAC1-210ENST00000490081 PELP1Q8IZL8 1130 aaKnown RBP15.62■□□□□ 0.09
HDAC1-210ENST00000490081 RPGRQ92834 1020 aaKnown RBP15.62■□□□□ 0.09
HDAC1-210ENST00000490081 PIM2Q9P1W9 311 aa15.62■□□□□ 0.09
HDAC1-210ENST00000490081 LRRFIP2Q9Y608 721 aaKnown RBP15.62■□□□□ 0.09
HDAC1-210ENST00000490081 A0A0G2JLW4 131 aa15.61■□□□□ 0.09
HDAC1-210ENST00000490081 GRIN3BO60391 1043 aa15.61■□□□□ 0.09
HDAC1-210ENST00000490081 ATP8B2P98198 1209 aa15.61■□□□□ 0.09
HDAC1-210ENST00000490081 FBXO3Q9UK99 471 aa15.61■□□□□ 0.09
HDAC1-210ENST00000490081 CHRNA5P30532 468 aa15.6■□□□□ 0.09
HDAC1-210ENST00000490081 RPS8P62241 208 aaKnown RBP15.6■□□□□ 0.09
HDAC1-210ENST00000490081 IFIT5Q13325 482 aaKnown RBP15.6■□□□□ 0.09
HDAC1-210ENST00000490081 GRAPQ13588 217 aa15.6■□□□□ 0.09
HDAC1-210ENST00000490081 GRIPAP1Q4V328 841 aa15.6■□□□□ 0.09
HDAC1-210ENST00000490081 TTLL6Q8N841 843 aa15.6■□□□□ 0.09
HDAC1-210ENST00000490081 GRAPLQ8TC17 118 aaPredicted RBP15.6■□□□□ 0.09
HDAC1-210ENST00000490081 CDC5LQ99459 802 aaKnown RBP15.6■□□□□ 0.09
HDAC1-210ENST00000490081 GREM2Q9H772 168 aa15.6■□□□□ 0.09
HDAC1-210ENST00000490081 ARFGEF1Q9Y6D6 1849 aa15.59■□□□□ 0.09
HDAC1-210ENST00000490081 ANKRD18BA2A2Z9 1011 aa15.59■□□□□ 0.09
HDAC1-210ENST00000490081 POLA2Q14181 598 aa15.59■□□□□ 0.09
HDAC1-210ENST00000490081 CCDC57Q2TAC2 916 aa15.59■□□□□ 0.09
HDAC1-210ENST00000490081 CC2D2BQ6DHV5 1058 aa15.59■□□□□ 0.09
HDAC1-210ENST00000490081 SSH3Q8TE77 659 aa15.59■□□□□ 0.09
HDAC1-210ENST00000490081 C7orf43Q8WVR3 580 aa15.59■□□□□ 0.09
HDAC1-210ENST00000490081 CRBNQ96SW2 442 aa15.59■□□□□ 0.09
HDAC1-210ENST00000490081 ITGA6P23229 1130 aa15.58■□□□□ 0.08
HDAC1-210ENST00000490081 RFX5P48382 616 aaPredicted RBP15.58■□□□□ 0.08
HDAC1-210ENST00000490081 BSDC1Q9NW68 430 aaPredicted RBP15.58■□□□□ 0.08
HDAC1-210ENST00000490081 SLX4Q8IY92 1834 aa15.58■□□□□ 0.08
HDAC1-210ENST00000490081 TAF1P21675 1872 aa15.58■□□□□ 0.08
HDAC1-210ENST00000490081 GOLGB1Q14789 3259 aaKnown RBP15.57■□□□□ 0.08
HDAC1-210ENST00000490081 FAM161AQ3B820 660 aa15.57■□□□□ 0.08
HDAC1-210ENST00000490081 DALRD3Q5D0E6 543 aaKnown RBP15.57■□□□□ 0.08
HDAC1-210ENST00000490081 CEP85Q6P2H3 762 aa15.57■□□□□ 0.08
HDAC1-210ENST00000490081 SP8Q8IXZ3 490 aa15.57■□□□□ 0.08
HDAC1-210ENST00000490081 ZNF622Q969S3 477 aaKnown RBP eCLIP15.57■□□□□ 0.084e-7■□□□□ 9.1
HDAC1-210ENST00000490081 COPRSQ9NQ92 184 aa15.57■□□□□ 0.08
HDAC1-210ENST00000490081 SEC31BQ9NQW1 1179 aa15.57■□□□□ 0.08
HDAC1-210ENST00000490081 SOGA3Q5TF21 947 aa15.56■□□□□ 0.08
HDAC1-210ENST00000490081 PRPF40BQ6NWY9 871 aaKnown RBP15.56■□□□□ 0.08
HDAC1-210ENST00000490081 ANKRD18AQ8IVF6 992 aa15.56■□□□□ 0.08
HDAC1-210ENST00000490081 CELF1Q92879 486 aaKnown RBP15.56■□□□□ 0.08
HDAC1-210ENST00000490081 ATP6V0A2Q9Y487 856 aa15.56■□□□□ 0.08
HDAC1-210ENST00000490081 LRRC37AA6NMS7 1700 aa15.55■□□□□ 0.08
HDAC1-210ENST00000490081 SRGAP3O43295 1099 aa15.55■□□□□ 0.08
HDAC1-210ENST00000490081 IGHMBP2P38935 993 aaKnown RBP15.55■□□□□ 0.08
HDAC1-210ENST00000490081 C1QTNF8P60827 252 aa15.55■□□□□ 0.08
HDAC1-210ENST00000490081 PTPN12Q05209 780 aaKnown RBP15.55■□□□□ 0.08
HDAC1-210ENST00000490081 ERICH6BQ5W0A0 696 aa15.55■□□□□ 0.08
HDAC1-210ENST00000490081 NOP58Q9Y2X3 529 aaKnown RBP15.55■□□□□ 0.08
HDAC1-210ENST00000490081 PNMA6EA0A0J9YXQ4 647 aa15.54■□□□□ 0.08
HDAC1-210ENST00000490081 HMMRO75330 724 aa15.54■□□□□ 0.08
HDAC1-210ENST00000490081 CIAO1O76071 339 aa15.54■□□□□ 0.08
HDAC1-210ENST00000490081 SIRT2Q8IXJ6 389 aa15.54■□□□□ 0.08
HDAC1-210ENST00000490081 EXOC6Q8TAG9 804 aa15.54■□□□□ 0.08
HDAC1-210ENST00000490081 RIPOR2Q9Y4F9 1068 aa15.54■□□□□ 0.08
HDAC1-210ENST00000490081 CACNA1SQ13698 1873 aa15.53■□□□□ 0.08
HDAC1-210ENST00000490081 PPEF1O14829 653 aaPredicted RBP15.53■□□□□ 0.08
HDAC1-210ENST00000490081 MPHOSPH8Q99549 860 aa15.53■□□□□ 0.08
HDAC1-210ENST00000490081 PODXL2Q9NZ53 605 aa15.53■□□□□ 0.08
HDAC1-210ENST00000490081 CHMP3Q9Y3E7 222 aa15.53■□□□□ 0.08
HDAC1-210ENST00000490081 SNED1Q8TER0 1413 aa15.52■□□□□ 0.08
HDAC1-210ENST00000490081 COL4A1P02462 1669 aa15.52■□□□□ 0.08
HDAC1-210ENST00000490081 EYA2O00167 538 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms