RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 TNPO1Q92973 898 aaKnown RBP10.12□□□□□ -0.79
LSAMP-205ENST00000490035 CCDC77Q9BR77 488 aa10.12□□□□□ -0.79
LSAMP-205ENST00000490035 TRIM27P14373 513 aa10.12□□□□□ -0.79
LSAMP-205ENST00000490035 BICDL1Q6ZP65 573 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 KIF1BO60333 1816 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 PLCG2P16885 1265 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 CCDC96Q2M329 555 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 KLHL10Q6JEL2 608 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 INTS4Q96HW7 963 aaKnown RBP10.11□□□□□ -0.79
LSAMP-205ENST00000490035 TRMT112Q9UI30 125 aaKnown RBP10.11□□□□□ -0.79
LSAMP-205ENST00000490035 ALDH1L1O75891 902 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 GJB2P29033 226 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 RTL9Q8NET4 1388 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 CADPS2Q86UW7 1296 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 PABPN1LA6NDY0 278 aaKnown RBP10.11□□□□□ -0.79
LSAMP-205ENST00000490035 KDM4AO75164 1064 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 ZSCAN22P10073 491 aaPredicted RBP10.11□□□□□ -0.79
LSAMP-205ENST00000490035 CLUL1Q15846 466 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 CAMK4Q16566 473 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 CCDC40Q4G0X9 1142 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 DDX46Q7L014 1031 aaKnown RBP10.11□□□□□ -0.79
LSAMP-205ENST00000490035 CEP63Q96MT8 703 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 NDC80O14777 642 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 ADCY5O95622 1261 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 SYKP43405 635 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 CEP135Q66GS9 1140 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 TBC1D9Q6ZT07 1266 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 MSANTD4Q8NCY6 345 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 UHRF1BP1Q6BDS2 1440 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 GOPCQ9HD26 462 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.11□□□□□ -0.79
LSAMP-205ENST00000490035 PSMA7O14818 248 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 BABAM1Q9NWV8 329 aa10.11□□□□□ -0.79
LSAMP-205ENST00000490035 HLTFQ14527 1009 aaKnown RBP eCLIP10.1□□□□□ -0.79
LSAMP-205ENST00000490035 C14orf93Q9H972 538 aaKnown RBP10.1□□□□□ -0.79
LSAMP-205ENST00000490035 HOMER2Q9NSB8 354 aa10.1□□□□□ -0.79
LSAMP-205ENST00000490035 ZNF518AQ6AHZ1 1483 aa10.1□□□□□ -0.79
LSAMP-205ENST00000490035 SYCP3Q8IZU3 236 aa10.1□□□□□ -0.79
LSAMP-205ENST00000490035 CFAP57Q96MR6 1250 aa10.1□□□□□ -0.79
LSAMP-205ENST00000490035 TBCAO75347 108 aaKnown RBP10.1□□□□□ -0.79
LSAMP-205ENST00000490035 TBC1D2Q9BYX2 928 aa10.1□□□□□ -0.79
LSAMP-205ENST00000490035 PLXNC1O60486 1568 aa10.1□□□□□ -0.79
LSAMP-205ENST00000490035 CTAGE9A4FU28 777 aa10.1□□□□□ -0.79
LSAMP-205ENST00000490035 NYXQ9GZU5 481 aa10.1□□□□□ -0.79
LSAMP-205ENST00000490035 SHANK2Q9UPX8 1470 aa10.1□□□□□ -0.79
LSAMP-205ENST00000490035 KIAA1524Q8TCG1 905 aa10.1□□□□□ -0.79
LSAMP-205ENST00000490035 CCDC113Q9H0I3 377 aa10.1□□□□□ -0.79
LSAMP-205ENST00000490035 PHF8Q9UPP1 1060 aa10.1□□□□□ -0.79
LSAMP-205ENST00000490035 RAD50Q92878 1312 aa10.1□□□□□ -0.79
LSAMP-205ENST00000490035 ST5P78524 1137 aa10.1□□□□□ -0.79
LSAMP-205ENST00000490035 APBB1IPQ7Z5R6 666 aaPredicted RBP10.1□□□□□ -0.79
LSAMP-205ENST00000490035 PPIP5K1Q6PFW1 1433 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 EXOC5O00471 708 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 DRC1Q96MC2 740 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 USP16Q9Y5T5 823 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 KRT86O43790 486 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 WTAPQ15007 396 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 BRAPQ7Z569 592 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 SSX2IPQ9Y2D8 614 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 TSPY2A6NKD2 308 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 UBASH3AP57075 661 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 GLT8D2Q9H1C3 349 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 KRT222Q8N1A0 295 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 TMC6Q7Z403 805 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 FAM200AQ8TCP9 573 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 SCLT1Q96NL6 688 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 UTP14AQ9BVJ6 771 aaKnown RBP10.09□□□□□ -0.79
LSAMP-205ENST00000490035 MCMDC2Q4G0Z9 681 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 ARFGAP2Q8N6H7 521 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 TRPM2O94759 1503 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 HSPA4P34932 840 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 LDHAL6AQ6ZMR3 332 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 ORC3Q9UBD5 711 aaPredicted RBP10.09□□□□□ -0.79
LSAMP-205ENST00000490035 ZBTB43O43298 467 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 MCM10Q7L590 875 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 MAP3K2Q9Y2U5 619 aa10.09□□□□□ -0.79
LSAMP-205ENST00000490035 EIF4G3O43432 1585 aaKnown RBP10.08□□□□□ -0.8
LSAMP-205ENST00000490035 STAT6P42226 847 aa10.08□□□□□ -0.8
LSAMP-205ENST00000490035 CCDC14Q49A88 953 aa10.08□□□□□ -0.8
LSAMP-205ENST00000490035 CROCCP2Q86T23 111 aa10.08□□□□□ -0.8
LSAMP-205ENST00000490035 JADE2Q9NQC1 790 aa10.08□□□□□ -0.8
LSAMP-205ENST00000490035 PIK3C2GO75747 1445 aa10.08□□□□□ -0.8
LSAMP-205ENST00000490035 TACC1O75410 805 aa10.08□□□□□ -0.8
LSAMP-205ENST00000490035 IL15P40933 162 aaPredicted RBP10.08□□□□□ -0.8
LSAMP-205ENST00000490035 NOP2P46087 812 aaKnown RBP10.08□□□□□ -0.8
LSAMP-205ENST00000490035 NAP1L3Q99457 506 aaPredicted RBP10.08□□□□□ -0.8
LSAMP-205ENST00000490035 RBM28Q9NW13 759 aaKnown RBP10.08□□□□□ -0.8
LSAMP-205ENST00000490035 POLR3AO14802 1390 aaPredicted RBP10.08□□□□□ -0.8
LSAMP-205ENST00000490035 INSRP06213 1382 aa10.08□□□□□ -0.8
LSAMP-205ENST00000490035 TMCO5BA8MYB1 307 aa10.08□□□□□ -0.8
LSAMP-205ENST00000490035 KRT13P13646 458 aa10.08□□□□□ -0.8
LSAMP-205ENST00000490035 CCDC97Q96F63 343 aaPredicted RBP10.08□□□□□ -0.8
LSAMP-205ENST00000490035 IFIT1BQ5T764 474 aaKnown RBP10.08□□□□□ -0.8
LSAMP-205ENST00000490035 CTNNBL1Q8WYA6 563 aaPredicted RBP10.08□□□□□ -0.8
LSAMP-205ENST00000490035 HDAC9Q9UKV0 1011 aa10.08□□□□□ -0.8
LSAMP-205ENST00000490035 N4BP3O15049 544 aa10.07□□□□□ -0.8
LSAMP-205ENST00000490035 NCBP1Q09161 790 aaKnown RBP10.07□□□□□ -0.8
LSAMP-205ENST00000490035 TRIM14Q14142 442 aa10.07□□□□□ -0.8
LSAMP-205ENST00000490035 URB2Q14146 1524 aaKnown RBP10.07□□□□□ -0.8
LSAMP-205ENST00000490035 ATP2A2P16615 1042 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms