RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.39□□□□□ -0.11
TRIM40-208ENST00000489892 PDE8AO60658 829 aa14.39□□□□□ -0.11
TRIM40-208ENST00000489892 G3BP1Q13283 466 aaKnown RBP eCLIP14.39□□□□□ -0.11
TRIM40-208ENST00000489892 TNS4Q8IZW8 715 aa14.39□□□□□ -0.11
TRIM40-208ENST00000489892 ARHGEF1Q92888 912 aaKnown RBP14.39□□□□□ -0.11
TRIM40-208ENST00000489892 IRS4O14654 1257 aaPredicted RBP14.38□□□□□ -0.11
TRIM40-208ENST00000489892 CCDC57Q2TAC2 916 aa14.38□□□□□ -0.11
TRIM40-208ENST00000489892 KAZALD1Q96I82 304 aa14.38□□□□□ -0.11
TRIM40-208ENST00000489892 COPRSQ9NQ92 184 aa14.38□□□□□ -0.11
TRIM40-208ENST00000489892 UBN2Q6ZU65 1347 aa14.38□□□□□ -0.11
TRIM40-208ENST00000489892 C4AP0C0L4 1744 aa14.38□□□□□ -0.11
TRIM40-208ENST00000489892 CARMIL3Q8ND23 1372 aa14.37□□□□□ -0.11
TRIM40-208ENST00000489892 PHF14O94880 888 aa14.37□□□□□ -0.11
TRIM40-208ENST00000489892 GTF2E1P29083 439 aaPredicted RBP14.37□□□□□ -0.11
TRIM40-208ENST00000489892 RGS3P49796 1198 aa14.37□□□□□ -0.11
TRIM40-208ENST00000489892 CTSWP56202 376 aa14.37□□□□□ -0.11
TRIM40-208ENST00000489892 FOXO4P98177 505 aa14.37□□□□□ -0.11
TRIM40-208ENST00000489892 FAM161AQ3B820 660 aa14.37□□□□□ -0.11
TRIM40-208ENST00000489892 USPL1Q5W0Q7 1092 aa14.37□□□□□ -0.11
TRIM40-208ENST00000489892 LMBR1LQ6UX01 489 aa14.37□□□□□ -0.11
TRIM40-208ENST00000489892 TPTE2Q6XPS3 522 aa14.37□□□□□ -0.11
TRIM40-208ENST00000489892 FAM89AQ96GI7 184 aa14.37□□□□□ -0.11
TRIM40-208ENST00000489892 LNPKQ9C0E8 428 aa14.37□□□□□ -0.11
TRIM40-208ENST00000489892 CHMP3Q9Y3E7 222 aa14.37□□□□□ -0.11
TRIM40-208ENST00000489892 EIF5BO60841 1220 aaKnown RBP14.36□□□□□ -0.11
TRIM40-208ENST00000489892 IFIT5Q13325 482 aaKnown RBP14.36□□□□□ -0.11
TRIM40-208ENST00000489892 EXOC6BQ9Y2D4 811 aa14.36□□□□□ -0.11
TRIM40-208ENST00000489892 MYH3P11055 1940 aa14.36□□□□□ -0.11
TRIM40-208ENST00000489892 LAMB2P55268 1798 aa14.35□□□□□ -0.11
TRIM40-208ENST00000489892 NPHP1O15259 732 aa14.35□□□□□ -0.11
TRIM40-208ENST00000489892 NTSR2O95665 410 aa14.35□□□□□ -0.11
TRIM40-208ENST00000489892 CSF1RP07333 972 aa14.35□□□□□ -0.11
TRIM40-208ENST00000489892 CCDC152Q4G0S7 254 aa14.35□□□□□ -0.11
TRIM40-208ENST00000489892 TAF7LQ5H9L4 462 aa14.35□□□□□ -0.11
TRIM40-208ENST00000489892 SUSD4Q5VX71 490 aa14.35□□□□□ -0.11
TRIM40-208ENST00000489892 NBPF5PQ86XG9 351 aaPredicted RBP14.35□□□□□ -0.11
TRIM40-208ENST00000489892 CLASRPQ8N2M8 674 aaKnown RBP14.35□□□□□ -0.11
TRIM40-208ENST00000489892 DNAJC5GQ8N7S2 189 aa14.35□□□□□ -0.11
TRIM40-208ENST00000489892 GPATCH3Q96I76 525 aa14.35□□□□□ -0.11
TRIM40-208ENST00000489892 RTL9Q8NET4 1388 aa14.34□□□□□ -0.11
TRIM40-208ENST00000489892 CIAO1O76071 339 aa14.34□□□□□ -0.11
TRIM40-208ENST00000489892 RTL5Q5HYW3 569 aaPredicted RBP14.34□□□□□ -0.11
TRIM40-208ENST00000489892 EPHA10Q5JZY3 1008 aa14.34□□□□□ -0.11
TRIM40-208ENST00000489892 NLGN1Q8N2Q7 840 aa14.34□□□□□ -0.11
TRIM40-208ENST00000489892 RHPN1Q8TCX5 695 aa14.34□□□□□ -0.11
TRIM40-208ENST00000489892 BCL2L12Q9HB09 334 aa14.34□□□□□ -0.11
TRIM40-208ENST00000489892 AOX1Q06278 1338 aa14.34□□□□□ -0.11
TRIM40-208ENST00000489892 ANKRD18BA2A2Z9 1011 aa14.33□□□□□ -0.12
TRIM40-208ENST00000489892 IL15P40933 162 aaPredicted RBP14.33□□□□□ -0.12
TRIM40-208ENST00000489892 SLC10A5Q5PT55 438 aa14.33□□□□□ -0.12
TRIM40-208ENST00000489892 TBC1D9BQ66K14 1250 aa14.33□□□□□ -0.12
TRIM40-208ENST00000489892 NLGN2Q8NFZ4 835 aa14.33□□□□□ -0.12
TRIM40-208ENST00000489892 SRP68Q9UHB9 627 aaKnown RBP14.33□□□□□ -0.12
TRIM40-208ENST00000489892 RIC1Q4ADV7 1423 aa14.32□□□□□ -0.12
TRIM40-208ENST00000489892 APBB1O00213 710 aa14.32□□□□□ -0.12
TRIM40-208ENST00000489892 RFX5P48382 616 aaPredicted RBP14.32□□□□□ -0.12
TRIM40-208ENST00000489892 PTPN12Q05209 780 aaKnown RBP14.32□□□□□ -0.12
TRIM40-208ENST00000489892 TTLL11Q8NHH1 800 aa14.32□□□□□ -0.12
TRIM40-208ENST00000489892 JARID2Q92833 1246 aaPredicted RBP14.32□□□□□ -0.12
TRIM40-208ENST00000489892 EYA2O00167 538 aa14.31□□□□□ -0.12
TRIM40-208ENST00000489892 GYS1P13807 737 aa14.31□□□□□ -0.12
TRIM40-208ENST00000489892 ST5P78524 1137 aa14.31□□□□□ -0.12
TRIM40-208ENST00000489892 BMP2KLQ5H9B9 411 aa14.31□□□□□ -0.12
TRIM40-208ENST00000489892 MSL1Q68DK7 614 aa14.31□□□□□ -0.12
TRIM40-208ENST00000489892 BICDL1Q6ZP65 573 aa14.31□□□□□ -0.12
TRIM40-208ENST00000489892 CNBD1Q8NA66 436 aa14.31□□□□□ -0.12
TRIM40-208ENST00000489892 CDC5LQ99459 802 aaKnown RBP14.31□□□□□ -0.12
TRIM40-208ENST00000489892 ERC2O15083 957 aa14.3□□□□□ -0.12
TRIM40-208ENST00000489892 GRIN3BO60391 1043 aa14.3□□□□□ -0.12
TRIM40-208ENST00000489892 IFIT2P09913 472 aaKnown RBP14.3□□□□□ -0.12
TRIM40-208ENST00000489892 ITGA6P23229 1130 aa14.3□□□□□ -0.12
TRIM40-208ENST00000489892 NFIXQ14938 502 aa14.3□□□□□ -0.12
TRIM40-208ENST00000489892 SF3B3Q15393 1217 aaKnown RBP14.3□□□□□ -0.12
TRIM40-208ENST00000489892 COL23A1Q86Y22 540 aaPredicted RBP14.3□□□□□ -0.12
TRIM40-208ENST00000489892 NLRP3Q96P20 1036 aa14.3□□□□□ -0.12
TRIM40-208ENST00000489892 OSBPL3Q9H4L5 887 aa14.3□□□□□ -0.12
TRIM40-208ENST00000489892 GPR108Q9NPR9 543 aa14.3□□□□□ -0.12
TRIM40-208ENST00000489892 AKAP2Q9Y2D5 859 aa14.3□□□□□ -0.12
TRIM40-208ENST00000489892 TTC41PQ6P2S7 1318 aa14.3□□□□□ -0.12
TRIM40-208ENST00000489892 FAM177BA6PVY3 158 aa14.29□□□□□ -0.12
TRIM40-208ENST00000489892 MX1P20591 662 aa14.29□□□□□ -0.12
TRIM40-208ENST00000489892 IGHMBP2P38935 993 aaKnown RBP14.29□□□□□ -0.12
TRIM40-208ENST00000489892 PLEKHM2Q8IWE5 1019 aa14.29□□□□□ -0.12
TRIM40-208ENST00000489892 SIL1Q9H173 461 aa14.29□□□□□ -0.12
TRIM40-208ENST00000489892 CEP126Q9P2H0 1117 aa14.29□□□□□ -0.12
TRIM40-208ENST00000489892 STAP2Q9UGK3 403 aa14.29□□□□□ -0.12
TRIM40-208ENST00000489892 PA2G4Q9UQ80 394 aaKnown RBP14.29□□□□□ -0.12
TRIM40-208ENST00000489892 HCLS1P14317 486 aaPredicted RBP14.28□□□□□ -0.12
TRIM40-208ENST00000489892 ERFEQ4G0M1 354 aa14.28□□□□□ -0.12
TRIM40-208ENST00000489892 AMIGO3Q86WK7 504 aa14.28□□□□□ -0.12
TRIM40-208ENST00000489892 GREM2Q9H772 168 aa14.28□□□□□ -0.12
TRIM40-208ENST00000489892 DDX60Q8IY21 1712 aaKnown RBP14.27□□□□□ -0.12
TRIM40-208ENST00000489892 MROH5Q6ZUA9 1318 aa14.27□□□□□ -0.12
TRIM40-208ENST00000489892 SMARCA5O60264 1052 aaPredicted RBP14.27□□□□□ -0.13
TRIM40-208ENST00000489892 TM4SF1P30408 202 aa14.27□□□□□ -0.13
TRIM40-208ENST00000489892 PDE1AP54750 535 aa14.27□□□□□ -0.13
TRIM40-208ENST00000489892 CASC1Q6TDU7 716 aa14.27□□□□□ -0.13
TRIM40-208ENST00000489892 LDHAL6AQ6ZMR3 332 aa14.27□□□□□ -0.13
TRIM40-208ENST00000489892 NUTM1Q86Y26 1132 aa14.27□□□□□ -0.13
TRIM40-208ENST00000489892 MPHOSPH8Q99549 860 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms