RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 PTPN12Q05209 780 aaKnown RBP17.53■□□□□ 0.4
VPS26A-205ENST00000489656 ERC1Q8IUD2 1116 aa17.53■□□□□ 0.4
VPS26A-205ENST00000489656 SYNE4Q8N205 404 aa17.53■□□□□ 0.4
VPS26A-205ENST00000489656 SETDB2Q96T68 719 aa17.53■□□□□ 0.4
VPS26A-205ENST00000489656 LRRCC1Q9C099 1032 aa17.53■□□□□ 0.4
VPS26A-205ENST00000489656 ZBTB47Q9UFB7 747 aaPredicted RBP17.53■□□□□ 0.4
VPS26A-205ENST00000489656 ATF5Q9Y2D1 282 aaPredicted RBP17.53■□□□□ 0.4
VPS26A-205ENST00000489656 RIC1Q4ADV7 1423 aa17.53■□□□□ 0.4
VPS26A-205ENST00000489656 RTL9Q8NET4 1388 aa17.53■□□□□ 0.4
VPS26A-205ENST00000489656 GYS1P13807 737 aa17.52■□□□□ 0.4
VPS26A-205ENST00000489656 DSG3P32926 999 aa17.52■□□□□ 0.4
VPS26A-205ENST00000489656 RGS3P49796 1198 aa17.52■□□□□ 0.4
VPS26A-205ENST00000489656 CTSWP56202 376 aa17.52■□□□□ 0.4
VPS26A-205ENST00000489656 SLC10A5Q5PT55 438 aa17.52■□□□□ 0.4
VPS26A-205ENST00000489656 KIF1BPQ96EK5 621 aa17.52■□□□□ 0.4
VPS26A-205ENST00000489656 TFCP2L1Q9NZI6 479 aa17.52■□□□□ 0.4
VPS26A-205ENST00000489656 TNRC6CQ9HCJ0 1690 aaKnown RBP17.52■□□□□ 0.39
VPS26A-205ENST00000489656 TTLL11Q8NHH1 800 aa17.51■□□□□ 0.39
VPS26A-205ENST00000489656 FBXO3Q9UK99 471 aa17.51■□□□□ 0.39
VPS26A-205ENST00000489656 PA2G4Q9UQ80 394 aaKnown RBP17.51■□□□□ 0.39
VPS26A-205ENST00000489656 TAF1P21675 1872 aa17.5■□□□□ 0.39
VPS26A-205ENST00000489656 G3BP1Q13283 466 aaKnown RBP eCLIP17.5■□□□□ 0.39
VPS26A-205ENST00000489656 RHPN1Q8TCX5 695 aa17.5■□□□□ 0.39
VPS26A-205ENST00000489656 ANKRD31Q8N7Z5 1873 aa17.5■□□□□ 0.39
VPS26A-205ENST00000489656 PNPLA7Q6ZV29 1317 aa17.49■□□□□ 0.39
VPS26A-205ENST00000489656 TM4SF1P30408 202 aa17.49■□□□□ 0.39
VPS26A-205ENST00000489656 NFIXQ14938 502 aa17.49■□□□□ 0.39
VPS26A-205ENST00000489656 COL23A1Q86Y22 540 aaPredicted RBP17.49■□□□□ 0.39
VPS26A-205ENST00000489656 CHMP3Q9Y3E7 222 aa17.49■□□□□ 0.39
VPS26A-205ENST00000489656 SALL3Q9BXA9 1300 aa17.48■□□□□ 0.39
VPS26A-205ENST00000489656 ARAP2Q8WZ64 1704 aa17.48■□□□□ 0.39
VPS26A-205ENST00000489656 FAM177BA6PVY3 158 aa17.48■□□□□ 0.39
VPS26A-205ENST00000489656 SMARCA5O60264 1052 aaPredicted RBP17.48■□□□□ 0.39
VPS26A-205ENST00000489656 CIAO1O76071 339 aa17.48■□□□□ 0.39
VPS26A-205ENST00000489656 OS9Q13438 667 aaPredicted RBP17.48■□□□□ 0.39
VPS26A-205ENST00000489656 SLC15A2Q16348 729 aa17.48■□□□□ 0.39
VPS26A-205ENST00000489656 CCDC57Q2TAC2 916 aa17.48■□□□□ 0.39
VPS26A-205ENST00000489656 FAM161AQ3B820 660 aa17.48■□□□□ 0.39
VPS26A-205ENST00000489656 ERFEQ4G0M1 354 aa17.48■□□□□ 0.39
VPS26A-205ENST00000489656 TPTE2Q6XPS3 522 aa17.48■□□□□ 0.39
VPS26A-205ENST00000489656 BICDL1Q6ZP65 573 aa17.48■□□□□ 0.39
VPS26A-205ENST00000489656 NBPF5PQ86XG9 351 aaPredicted RBP17.48■□□□□ 0.39
VPS26A-205ENST00000489656 STK32BQ9NY57 414 aa17.48■□□□□ 0.39
VPS26A-205ENST00000489656 ABCC12Q96J65 1359 aa17.48■□□□□ 0.39
VPS26A-205ENST00000489656 APBB1O00213 710 aa17.47■□□□□ 0.39
VPS26A-205ENST00000489656 SASH1O94885 1247 aa17.47■□□□□ 0.39
VPS26A-205ENST00000489656 HCLS1P14317 486 aaPredicted RBP17.47■□□□□ 0.39
VPS26A-205ENST00000489656 IFIT5Q13325 482 aaKnown RBP17.47■□□□□ 0.39
VPS26A-205ENST00000489656 NUTM1Q86Y26 1132 aa17.47■□□□□ 0.39
VPS26A-205ENST00000489656 PLEKHM2Q8IWE5 1019 aa17.47■□□□□ 0.39
VPS26A-205ENST00000489656 GREM2Q9H772 168 aa17.47■□□□□ 0.39
VPS26A-205ENST00000489656 ANO8Q9HCE9 1232 aaPredicted RBP17.47■□□□□ 0.39
VPS26A-205ENST00000489656 SF3B3Q15393 1217 aaKnown RBP17.46■□□□□ 0.39
VPS26A-205ENST00000489656 CCDC152Q4G0S7 254 aa17.46■□□□□ 0.39
VPS26A-205ENST00000489656 DEFB132Q7Z7B7 95 aa17.46■□□□□ 0.39
VPS26A-205ENST00000489656 NLGN1Q8N2Q7 840 aa17.46■□□□□ 0.39
VPS26A-205ENST00000489656 KLHDC4Q8TBB5 520 aa17.46■□□□□ 0.39
VPS26A-205ENST00000489656 OSBPL3Q9H4L5 887 aa17.46■□□□□ 0.39
VPS26A-205ENST00000489656 ANKRD18BA2A2Z9 1011 aa17.45■□□□□ 0.38
VPS26A-205ENST00000489656 EYA2O00167 538 aa17.45■□□□□ 0.38
VPS26A-205ENST00000489656 ITGA6P23229 1130 aa17.45■□□□□ 0.38
VPS26A-205ENST00000489656 IL15P40933 162 aaPredicted RBP17.45■□□□□ 0.38
VPS26A-205ENST00000489656 ATG9AQ7Z3C6 839 aa17.45■□□□□ 0.38
VPS26A-205ENST00000489656 C16orf71Q8IYS4 520 aaPredicted RBP17.45■□□□□ 0.38
VPS26A-205ENST00000489656 SIL1Q9H173 461 aa17.45■□□□□ 0.38
VPS26A-205ENST00000489656 AOX1Q06278 1338 aa17.45■□□□□ 0.38
VPS26A-205ENST00000489656 GTF2E1P29083 439 aaPredicted RBP17.44■□□□□ 0.38
VPS26A-205ENST00000489656 CLASRPQ8N2M8 674 aaKnown RBP17.44■□□□□ 0.38
VPS26A-205ENST00000489656 STAP2Q9UGK3 403 aa17.44■□□□□ 0.38
VPS26A-205ENST00000489656 BMP2KLQ5H9B9 411 aa17.43■□□□□ 0.38
VPS26A-205ENST00000489656 CNBD1Q8NA66 436 aa17.43■□□□□ 0.38
VPS26A-205ENST00000489656 OTUD7AQ8TE49 926 aaPredicted RBP17.43■□□□□ 0.38
VPS26A-205ENST00000489656 ZNF594Q96JF6 807 aaPredicted RBP17.43■□□□□ 0.38
VPS26A-205ENST00000489656 IL1RAPL2Q9NP60 686 aa17.43■□□□□ 0.38
VPS26A-205ENST00000489656 GPR108Q9NPR9 543 aa17.43■□□□□ 0.38
VPS26A-205ENST00000489656 COL4A1P02462 1669 aa17.42■□□□□ 0.38
VPS26A-205ENST00000489656 POLRMTO00411 1230 aaKnown RBP17.42■□□□□ 0.38
VPS26A-205ENST00000489656 SERPINB2P05120 415 aa17.42■□□□□ 0.38
VPS26A-205ENST00000489656 MX1P20591 662 aa17.42■□□□□ 0.38
VPS26A-205ENST00000489656 PDE1AP54750 535 aa17.42■□□□□ 0.38
VPS26A-205ENST00000489656 DDR1Q08345 913 aa17.42■□□□□ 0.38
VPS26A-205ENST00000489656 TAF7LQ5H9L4 462 aa17.42■□□□□ 0.38
VPS26A-205ENST00000489656 PRR5LQ6MZQ0 368 aa17.42■□□□□ 0.38
VPS26A-205ENST00000489656 NLRP3Q96P20 1036 aa17.41■□□□□ 0.38
VPS26A-205ENST00000489656 CCDC85AQ96PX6 553 aaPredicted RBP17.41■□□□□ 0.38
VPS26A-205ENST00000489656 ZNF609O15014 1411 aa17.4■□□□□ 0.38
VPS26A-205ENST00000489656 ABCB7O75027 752 aa17.4■□□□□ 0.38
VPS26A-205ENST00000489656 ST5P78524 1137 aa17.4■□□□□ 0.38
VPS26A-205ENST00000489656 TFCP2Q12800 502 aa17.4■□□□□ 0.38
VPS26A-205ENST00000489656 LRRC24Q50LG9 513 aa17.4■□□□□ 0.38
VPS26A-205ENST00000489656 TTC22Q5TAA0 569 aa17.4■□□□□ 0.38
VPS26A-205ENST00000489656 C3orf67Q6ZVT6 689 aa17.4■□□□□ 0.38
VPS26A-205ENST00000489656 PUS3Q9BZE2 481 aaKnown RBP17.4■□□□□ 0.38
VPS26A-205ENST00000489656 ZNF219Q9P2Y4 722 aaPredicted RBP17.4■□□□□ 0.38
VPS26A-205ENST00000489656 RIPOR2Q9Y4F9 1068 aa17.4■□□□□ 0.38
VPS26A-205ENST00000489656 COL11A2P13942 1736 aaPredicted RBP17.4■□□□□ 0.38
VPS26A-205ENST00000489656 TTC41PQ6P2S7 1318 aa17.4■□□□□ 0.38
VPS26A-205ENST00000489656 LRRC37AA6NMS7 1700 aa17.39■□□□□ 0.37
VPS26A-205ENST00000489656 TNNI3KQ59H18 835 aa17.39■□□□□ 0.37
VPS26A-205ENST00000489656 LDHAL6AQ6ZMR3 332 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms