RNA–Protein interactions for RNA: ENST00000489637.3

MVB12B-206, Transcript of multivesicular body subunit 12B, humanhuman

TSL 1 (best) BASIC

Gene MVB12B, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12B-206ENST00000489637 GOLIM4O00461 696 aa18.34■□□□□ 0.53
MVB12B-206ENST00000489637 HSPA4P34932 840 aa18.34■□□□□ 0.53
MVB12B-206ENST00000489637 CRKLP46109 303 aaKnown RBP18.34■□□□□ 0.53
MVB12B-206ENST00000489637 COL14A1Q05707 1796 aaKnown RBP18.33■□□□□ 0.53
MVB12B-206ENST00000489637 LOC102724428A0A0B4J2F2 783 aa18.33■□□□□ 0.53
MVB12B-206ENST00000489637 SIK1P57059 783 aa18.33■□□□□ 0.53
MVB12B-206ENST00000489637 RAB3GAP1Q15042 981 aa18.33■□□□□ 0.53
MVB12B-206ENST00000489637 UBR2Q8IWV8 1755 aa18.33■□□□□ 0.52
MVB12B-206ENST00000489637 INTS5Q6P9B9 1019 aaKnown RBP18.33■□□□□ 0.52
MVB12B-206ENST00000489637 CCDC24Q8N4L8 307 aa18.33■□□□□ 0.52
MVB12B-206ENST00000489637 UBN2Q6ZU65 1347 aa18.32■□□□□ 0.52
MVB12B-206ENST00000489637 BICDL1Q6ZP65 573 aa18.32■□□□□ 0.52
MVB12B-206ENST00000489637 TEX13AQ9BXU3 409 aaPredicted RBP18.32■□□□□ 0.52
MVB12B-206ENST00000489637 EYA2O00167 538 aa18.32■□□□□ 0.52
MVB12B-206ENST00000489637 CASTP20810 708 aaKnown RBP18.32■□□□□ 0.52
MVB12B-206ENST00000489637 VSIG10Q8N0Z9 540 aa18.32■□□□□ 0.52
MVB12B-206ENST00000489637 RAD50Q92878 1312 aa18.31■□□□□ 0.52
MVB12B-206ENST00000489637 A0A1B0GUL7 405 aa18.31■□□□□ 0.52
MVB12B-206ENST00000489637 FKBP4Q02790 459 aaKnown RBP eCLIP18.31■□□□□ 0.52
MVB12B-206ENST00000489637 AHDC1Q5TGY3 1603 aaPredicted RBP18.31■□□□□ 0.52
MVB12B-206ENST00000489637 IRS4O14654 1257 aaPredicted RBP18.31■□□□□ 0.52
MVB12B-206ENST00000489637 A0A0G2JLW4 131 aa18.3■□□□□ 0.52
MVB12B-206ENST00000489637 DDX11L8A8MPP1 907 aa18.3■□□□□ 0.52
MVB12B-206ENST00000489637 JAKMIP1Q96N16 626 aaKnown RBP18.3■□□□□ 0.52
MVB12B-206ENST00000489637 RBM8AQ9Y5S9 174 aaKnown RBP18.3■□□□□ 0.52
MVB12B-206ENST00000489637 LAMB4A4D0S4 1761 aa18.3■□□□□ 0.52
MVB12B-206ENST00000489637 ZBTB38Q8NAP3 1195 aaPredicted RBP18.3■□□□□ 0.52
MVB12B-206ENST00000489637 ITGA6P23229 1130 aa18.29■□□□□ 0.52
MVB12B-206ENST00000489637 SCARF1Q14162 830 aa18.29■□□□□ 0.52
MVB12B-206ENST00000489637 SUSD4Q5VX71 490 aa18.29■□□□□ 0.52
MVB12B-206ENST00000489637 LARGE1O95461 756 aa18.29■□□□□ 0.52
MVB12B-206ENST00000489637 IFIT5Q13325 482 aaKnown RBP18.29■□□□□ 0.52
MVB12B-206ENST00000489637 PCCAP05165 728 aaPredicted RBP18.28■□□□□ 0.52
MVB12B-206ENST00000489637 AK2P54819 239 aa18.28■□□□□ 0.52
MVB12B-206ENST00000489637 GORABQ5T7V8 394 aa18.28■□□□□ 0.52
MVB12B-206ENST00000489637 TTLL11Q8NHH1 800 aa18.28■□□□□ 0.52
MVB12B-206ENST00000489637 SEC31BQ9NQW1 1179 aa18.28■□□□□ 0.52
MVB12B-206ENST00000489637 CEP126Q9P2H0 1117 aa18.28■□□□□ 0.52
MVB12B-206ENST00000489637 COL15A1P39059 1388 aa18.28■□□□□ 0.52
MVB12B-206ENST00000489637 TRAK2O60296 914 aa18.28■□□□□ 0.52
MVB12B-206ENST00000489637 ATP5JP18859 108 aa18.28■□□□□ 0.52
MVB12B-206ENST00000489637 LDHAL6AQ6ZMR3 332 aa18.28■□□□□ 0.52
MVB12B-206ENST00000489637 ZDHHC9Q9Y397 364 aa18.28■□□□□ 0.52
MVB12B-206ENST00000489637 PLEKHG2Q9H7P9 1386 aa18.28■□□□□ 0.52
MVB12B-206ENST00000489637 VPS53Q5VIR6 699 aa18.27■□□□□ 0.52
MVB12B-206ENST00000489637 RUFY2Q8WXA3 655 aa18.27■□□□□ 0.52
MVB12B-206ENST00000489637 CCDC87Q9NVE4 849 aa18.27■□□□□ 0.52
MVB12B-206ENST00000489637 PAPPAQ13219 1627 aa18.27■□□□□ 0.52
MVB12B-206ENST00000489637 WTIPA6NIX2 430 aaPredicted RBP18.27■□□□□ 0.52
MVB12B-206ENST00000489637 IL15P40933 162 aaPredicted RBP18.26■□□□□ 0.51
MVB12B-206ENST00000489637 CNNM1Q9NRU3 951 aa18.26■□□□□ 0.51
MVB12B-206ENST00000489637 USP21Q9UK80 565 aa18.26■□□□□ 0.51
MVB12B-206ENST00000489637 PLCH1Q4KWH8 1693 aa18.26■□□□□ 0.51
MVB12B-206ENST00000489637 CCDC171Q6TFL3 1326 aa18.26■□□□□ 0.51
MVB12B-206ENST00000489637 TAF5LO75529 589 aa18.26■□□□□ 0.51
MVB12B-206ENST00000489637 CREB3L3Q68CJ9 461 aa18.26■□□□□ 0.51
MVB12B-206ENST00000489637 MCTP1Q6DN14 999 aa18.26■□□□□ 0.51
MVB12B-206ENST00000489637 BRPF3Q9ULD4 1205 aa18.26■□□□□ 0.51
MVB12B-206ENST00000489637 PALLDQ8WX93 1383 aa18.26■□□□□ 0.51
MVB12B-206ENST00000489637 IFIT1P09914 478 aaKnown RBP18.26■□□□□ 0.51
MVB12B-206ENST00000489637 EIF5P55010 431 aaKnown RBP18.26■□□□□ 0.51
MVB12B-206ENST00000489637 METTL24Q5JXM2 366 aa18.26■□□□□ 0.51
MVB12B-206ENST00000489637 RUFY3Q7L099 469 aa18.26■□□□□ 0.51
MVB12B-206ENST00000489637 NECAB1Q8N987 351 aa18.26■□□□□ 0.51
MVB12B-206ENST00000489637 XAGE2Q96GT9 111 aa18.26■□□□□ 0.51
MVB12B-206ENST00000489637 GBP4Q96PP9 640 aa18.26■□□□□ 0.51
MVB12B-206ENST00000489637 NUP188Q5SRE5 1749 aa18.25■□□□□ 0.51
MVB12B-206ENST00000489637 CLEC17AQ6ZS10 378 aa18.25■□□□□ 0.51
MVB12B-206ENST00000489637 LRRC2Q9BYS8 371 aa18.25■□□□□ 0.51
MVB12B-206ENST00000489637 DOT1LQ8TEK3 1739 aa18.25■□□□□ 0.51
MVB12B-206ENST00000489637 LINC00116Q8NCU8 138 aa18.25■□□□□ 0.51
MVB12B-206ENST00000489637 NIP7Q9Y221 180 aaKnown RBP eCLIP18.25■□□□□ 0.51
MVB12B-206ENST00000489637 TJP1Q07157 1748 aa18.25■□□□□ 0.51
MVB12B-206ENST00000489637 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.24■□□□□ 0.51
MVB12B-206ENST00000489637 PPFIA3O75145 1194 aa18.24■□□□□ 0.51
MVB12B-206ENST00000489637 IL6STP40189 918 aaPredicted RBP18.24■□□□□ 0.51
MVB12B-206ENST00000489637 AMIGO3Q86WK7 504 aa18.24■□□□□ 0.51
MVB12B-206ENST00000489637 IL27Q8NEV9 243 aa18.24■□□□□ 0.51
MVB12B-206ENST00000489637 IL17RAQ96F46 866 aa18.24■□□□□ 0.51
MVB12B-206ENST00000489637 HAUS7Q99871 368 aa18.24■□□□□ 0.51
MVB12B-206ENST00000489637 PAG1Q9NWQ8 432 aa18.24■□□□□ 0.51
MVB12B-206ENST00000489637 THRAP3Q9Y2W1 955 aaKnown RBP18.24■□□□□ 0.51
MVB12B-206ENST00000489637 CTSWP56202 376 aa18.24■□□□□ 0.51
MVB12B-206ENST00000489637 NECTIN1Q15223 517 aa18.24■□□□□ 0.51
MVB12B-206ENST00000489637 MEX3CQ5U5Q3 659 aaKnown RBP18.24■□□□□ 0.51
MVB12B-206ENST00000489637 SLC27A2O14975 620 aa18.23■□□□□ 0.51
MVB12B-206ENST00000489637 ZNF609O15014 1411 aa18.23■□□□□ 0.51
MVB12B-206ENST00000489637 FSD2A1L4K1 749 aa18.23■□□□□ 0.51
MVB12B-206ENST00000489637 BAG4O95429 457 aaKnown RBP18.23■□□□□ 0.51
MVB12B-206ENST00000489637 CSF1RP07333 972 aa18.23■□□□□ 0.51
MVB12B-206ENST00000489637 NCLP19338 710 aaKnown RBP18.23■□□□□ 0.51
MVB12B-206ENST00000489637 TRIM28Q13263 835 aaKnown RBP18.23■□□□□ 0.51
MVB12B-206ENST00000489637 ZAP70P43403 619 aa18.22■□□□□ 0.51
MVB12B-206ENST00000489637 ANAPC15P60006 121 aa18.22■□□□□ 0.51
MVB12B-206ENST00000489637 STK3Q13188 491 aa18.22■□□□□ 0.51
MVB12B-206ENST00000489637 MAP4K1Q92918 833 aa18.22■□□□□ 0.51
MVB12B-206ENST00000489637 SRP68Q9UHB9 627 aaKnown RBP18.22■□□□□ 0.51
MVB12B-206ENST00000489637 HSPA1LP34931 641 aa18.22■□□□□ 0.51
MVB12B-206ENST00000489637 TTC39AQ5SRH9 613 aa18.22■□□□□ 0.51
MVB12B-206ENST00000489637 L1TD1Q5T7N2 865 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms