RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 ZNF622Q969S3 477 aaKnown RBP eCLIP19.55■□□□□ 0.72
SMIM11A-206ENST00000489469 ALDH1B1P30837 517 aa19.54■□□□□ 0.72
SMIM11A-206ENST00000489469 HOXA10P31260 410 aaPredicted RBP19.54■□□□□ 0.72
SMIM11A-206ENST00000489469 SF3B3Q15393 1217 aaKnown RBP19.54■□□□□ 0.72
SMIM11A-206ENST00000489469 DALRD3Q5D0E6 543 aaKnown RBP19.54■□□□□ 0.72
SMIM11A-206ENST00000489469 INTS3Q68E01 1043 aaKnown RBP19.54■□□□□ 0.72
SMIM11A-206ENST00000489469 FTSJ3Q8IY81 847 aaKnown RBP19.54■□□□□ 0.72
SMIM11A-206ENST00000489469 TTLL6Q8N841 843 aa19.54■□□□□ 0.72
SMIM11A-206ENST00000489469 RBM17Q96I25 401 aaKnown RBP19.54■□□□□ 0.72
SMIM11A-206ENST00000489469 PLA2G12BQ9BX93 195 aa19.54■□□□□ 0.72
SMIM11A-206ENST00000489469 UTYO14607 1347 aa19.53■□□□□ 0.72
SMIM11A-206ENST00000489469 CASP7P55210 303 aa19.53■□□□□ 0.72
SMIM11A-206ENST00000489469 DZIP1LQ8IYY4 767 aaKnown RBP19.53■□□□□ 0.72
SMIM11A-206ENST00000489469 HDAC5Q9UQL6 1122 aa19.53■□□□□ 0.72
SMIM11A-206ENST00000489469 CCDC152Q4G0S7 254 aa19.52■□□□□ 0.72
SMIM11A-206ENST00000489469 CRAMP1Q96RY5 1269 aa19.52■□□□□ 0.72
SMIM11A-206ENST00000489469 SLX4Q8IY92 1834 aa19.52■□□□□ 0.72
SMIM11A-206ENST00000489469 GPR162Q16538 588 aa19.51■□□□□ 0.71
SMIM11A-206ENST00000489469 DDX46Q7L014 1031 aaKnown RBP19.51■□□□□ 0.71
SMIM11A-206ENST00000489469 JARID2Q92833 1246 aaPredicted RBP19.51■□□□□ 0.71
SMIM11A-206ENST00000489469 CLUAP1Q96AJ1 413 aa19.51■□□□□ 0.71
SMIM11A-206ENST00000489469 BCS1LQ9Y276 419 aa19.51■□□□□ 0.71
SMIM11A-206ENST00000489469 ZBTB12Q9Y330 459 aaPredicted RBP19.51■□□□□ 0.71
SMIM11A-206ENST00000489469 GRIN3BO60391 1043 aa19.5■□□□□ 0.71
SMIM11A-206ENST00000489469 CTSWP56202 376 aa19.5■□□□□ 0.71
SMIM11A-206ENST00000489469 C3orf67Q6ZVT6 689 aa19.5■□□□□ 0.71
SMIM11A-206ENST00000489469 PELP1Q8IZL8 1130 aaKnown RBP19.5■□□□□ 0.71
SMIM11A-206ENST00000489469 USP44Q9H0E7 712 aa19.5■□□□□ 0.71
SMIM11A-206ENST00000489469 TAF1P21675 1872 aa19.49■□□□□ 0.71
SMIM11A-206ENST00000489469 RTL9Q8NET4 1388 aa19.48■□□□□ 0.71
SMIM11A-206ENST00000489469 NBPF7P0C2Y1 421 aaPredicted RBP19.48■□□□□ 0.71
SMIM11A-206ENST00000489469 SOGA3Q5TF21 947 aa19.48■□□□□ 0.71
SMIM11A-206ENST00000489469 PRPF40BQ6NWY9 871 aaKnown RBP19.48■□□□□ 0.71
SMIM11A-206ENST00000489469 BBOX1O75936 387 aa19.47■□□□□ 0.71
SMIM11A-206ENST00000489469 GNAI3P08754 354 aa19.47■□□□□ 0.71
SMIM11A-206ENST00000489469 UBTFL1P0CB47 393 aaPredicted RBP19.47■□□□□ 0.71
SMIM11A-206ENST00000489469 GRAPQ13588 217 aa19.47■□□□□ 0.71
SMIM11A-206ENST00000489469 TMC4Q7Z404 712 aa19.47■□□□□ 0.71
SMIM11A-206ENST00000489469 TMEM57Q8N5G2 664 aa19.47■□□□□ 0.71
SMIM11A-206ENST00000489469 TTLL11Q8NHH1 800 aa19.47■□□□□ 0.71
SMIM11A-206ENST00000489469 GRAPLQ8TC17 118 aaPredicted RBP19.47■□□□□ 0.71
SMIM11A-206ENST00000489469 TNNQ9UQP3 1299 aa19.47■□□□□ 0.71
SMIM11A-206ENST00000489469 CHD4Q14839 1912 aa19.47■□□□□ 0.71
SMIM11A-206ENST00000489469 CSF1RP07333 972 aa19.46■□□□□ 0.71
SMIM11A-206ENST00000489469 YBX3P16989 372 aaKnown RBP eCLIP19.46■□□□□ 0.71
SMIM11A-206ENST00000489469 PDE3AQ14432 1141 aa19.46■□□□□ 0.71
SMIM11A-206ENST00000489469 TMX4Q9H1E5 349 aaPredicted RBP19.46■□□□□ 0.71
SMIM11A-206ENST00000489469 WWC3Q9ULE0 1092 aa19.46■□□□□ 0.71
SMIM11A-206ENST00000489469 FER1L6Q2WGJ9 1857 aa19.45■□□□□ 0.7
SMIM11A-206ENST00000489469 CC2D2BQ6DHV5 1058 aa19.45■□□□□ 0.7
SMIM11A-206ENST00000489469 ITPRIPQ8IWB1 547 aa19.45■□□□□ 0.7
SMIM11A-206ENST00000489469 SUCLG2Q96I99 432 aa19.45■□□□□ 0.7
SMIM11A-206ENST00000489469 CDC5LQ99459 802 aaKnown RBP19.45■□□□□ 0.7
SMIM11A-206ENST00000489469 PPEF1O14829 653 aaPredicted RBP19.44■□□□□ 0.7
SMIM11A-206ENST00000489469 RLBP1P12271 317 aa19.44■□□□□ 0.7
SMIM11A-206ENST00000489469 FOXO4P98177 505 aa19.44■□□□□ 0.7
SMIM11A-206ENST00000489469 GRIPAP1Q4V328 841 aa19.44■□□□□ 0.7
SMIM11A-206ENST00000489469 CHMP4BQ9H444 224 aaKnown RBP19.44■□□□□ 0.7
SMIM11A-206ENST00000489469 PLIN1O60240 522 aa19.43■□□□□ 0.7
SMIM11A-206ENST00000489469 MEIS3Q99687 375 aa19.43■□□□□ 0.7
SMIM11A-206ENST00000489469 GREM2Q9H772 168 aa19.43■□□□□ 0.7
SMIM11A-206ENST00000489469 SPEF2Q9C093 1822 aa19.43■□□□□ 0.7
SMIM11A-206ENST00000489469 LRRC37AA6NMS7 1700 aa19.42■□□□□ 0.7
SMIM11A-206ENST00000489469 C21orf2O43822 256 aa19.42■□□□□ 0.7
SMIM11A-206ENST00000489469 RRP1P56182 461 aaKnown RBP19.42■□□□□ 0.7
SMIM11A-206ENST00000489469 RPS8P62241 208 aaKnown RBP19.42■□□□□ 0.7
SMIM11A-206ENST00000489469 RABL6Q3YEC7 729 aaPredicted RBP19.42■□□□□ 0.7
SMIM11A-206ENST00000489469 CCDC93Q567U6 631 aa19.42■□□□□ 0.7
SMIM11A-206ENST00000489469 LMBR1LQ6UX01 489 aa19.42■□□□□ 0.7
SMIM11A-206ENST00000489469 ANKRD18AQ8IVF6 992 aa19.42■□□□□ 0.7
SMIM11A-206ENST00000489469 PANK1Q8TE04 598 aa19.42■□□□□ 0.7
SMIM11A-206ENST00000489469 C7orf43Q8WVR3 580 aa19.42■□□□□ 0.7
SMIM11A-206ENST00000489469 KAZALD1Q96I82 304 aa19.42■□□□□ 0.7
SMIM11A-206ENST00000489469 CCDC85AQ96PX6 553 aaPredicted RBP19.42■□□□□ 0.7
SMIM11A-206ENST00000489469 BICC1Q9H694 974 aaKnown RBP19.42■□□□□ 0.7
SMIM11A-206ENST00000489469 CHMP3Q9Y3E7 222 aa19.42■□□□□ 0.7
SMIM11A-206ENST00000489469 ANKRD18BA2A2Z9 1011 aa19.41■□□□□ 0.7
SMIM11A-206ENST00000489469 ITGA6P23229 1130 aa19.41■□□□□ 0.7
SMIM11A-206ENST00000489469 IFIT5Q13325 482 aaKnown RBP19.41■□□□□ 0.7
SMIM11A-206ENST00000489469 MVPQ14764 893 aaKnown RBP19.41■□□□□ 0.7
SMIM11A-206ENST00000489469 CCDC57Q2TAC2 916 aa19.41■□□□□ 0.7
SMIM11A-206ENST00000489469 FAM161AQ3B820 660 aa19.41■□□□□ 0.7
SMIM11A-206ENST00000489469 EPHA10Q5JZY3 1008 aa19.41■□□□□ 0.7
SMIM11A-206ENST00000489469 SP8Q8IXZ3 490 aa19.41■□□□□ 0.7
SMIM11A-206ENST00000489469 CELF1Q92879 486 aaKnown RBP19.41■□□□□ 0.7
SMIM11A-206ENST00000489469 SEC31BQ9NQW1 1179 aa19.41■□□□□ 0.7
SMIM11A-206ENST00000489469 DDX19BQ9UMR2 479 aa19.41■□□□□ 0.7
SMIM11A-206ENST00000489469 ATP6V0A2Q9Y487 856 aa19.41■□□□□ 0.7
SMIM11A-206ENST00000489469 SBF1O95248 1867 aa19.41■□□□□ 0.7
SMIM11A-206ENST00000489469 CCDC88AQ3V6T2 1871 aa19.41■□□□□ 0.7
SMIM11A-206ENST00000489469 GNAI2P04899 355 aa19.4■□□□□ 0.7
SMIM11A-206ENST00000489469 IGHMBP2P38935 993 aaKnown RBP19.4■□□□□ 0.7
SMIM11A-206ENST00000489469 RTKN2Q8IZC4 609 aa19.4■□□□□ 0.7
SMIM11A-206ENST00000489469 ARHGAP27Q6ZUM4 889 aa19.39■□□□□ 0.69
SMIM11A-206ENST00000489469 LRRFIP2Q9Y608 721 aaKnown RBP19.39■□□□□ 0.69
SMIM11A-206ENST00000489469 GOLGB1Q14789 3259 aaKnown RBP19.39■□□□□ 0.69
SMIM11A-206ENST00000489469 ZBTB7BO15156 539 aaPredicted RBP19.38■□□□□ 0.69
SMIM11A-206ENST00000489469 ANKRD44Q8N8A2 993 aa19.38■□□□□ 0.69
SMIM11A-206ENST00000489469 LTBP3Q9NS15 1303 aa19.38■□□□□ 0.69
SMIM11A-206ENST00000489469 DICER1Q9UPY3 1922 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms