RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 CSF1RP07333 972 aa22.15■■□□□ 1.14
CD40-206ENST00000489304 IPO9Q96P70 1041 aaKnown RBP22.15■■□□□ 1.14
CD40-206ENST00000489304 UBR3Q6ZT12 1888 aa22.14■■□□□ 1.14
CD40-206ENST00000489304 TTC41PQ6P2S7 1318 aa22.14■■□□□ 1.13
CD40-206ENST00000489304 SH3TC1Q8TE82 1336 aa22.14■■□□□ 1.13
CD40-206ENST00000489304 TSHZ3Q63HK5 1081 aa22.14■■□□□ 1.13
CD40-206ENST00000489304 AKT1S1Q96B36 256 aa22.14■■□□□ 1.13
CD40-206ENST00000489304 TBC1D32Q96NH3 1257 aa22.14■■□□□ 1.13
CD40-206ENST00000489304 PDE8AO60658 829 aa22.13■■□□□ 1.13
CD40-206ENST00000489304 EIF5BO60841 1220 aaKnown RBP22.13■■□□□ 1.13
CD40-206ENST00000489304 CTSWP56202 376 aa22.13■■□□□ 1.13
CD40-206ENST00000489304 EN1Q05925 392 aaPredicted RBP22.13■■□□□ 1.13
CD40-206ENST00000489304 EZH2Q15910 746 aaKnown RBP22.13■■□□□ 1.13
CD40-206ENST00000489304 TTLL11Q8NHH1 800 aa22.13■■□□□ 1.13
CD40-206ENST00000489304 PI4K2BQ8TCG2 481 aa22.13■■□□□ 1.13
CD40-206ENST00000489304 ADRA2BP18089 450 aa22.12■■□□□ 1.13
CD40-206ENST00000489304 SSFA2P28290 1259 aa22.12■■□□□ 1.13
CD40-206ENST00000489304 MFAP1P55081 439 aaKnown RBP22.12■■□□□ 1.13
CD40-206ENST00000489304 LAMB2P55268 1798 aa22.12■■□□□ 1.13
CD40-206ENST00000489304 IFIT2P09913 472 aaKnown RBP22.11■■□□□ 1.13
CD40-206ENST00000489304 ERFEQ4G0M1 354 aa22.11■■□□□ 1.13
CD40-206ENST00000489304 AACSQ86V21 672 aa22.11■■□□□ 1.13
CD40-206ENST00000489304 GREM2Q9H772 168 aa22.11■■□□□ 1.13
CD40-206ENST00000489304 EAF2Q96CJ1 260 aaPredicted RBP22.11■■□□□ 1.13
CD40-206ENST00000489304 PUS3Q9BZE2 481 aaKnown RBP22.11■■□□□ 1.13
CD40-206ENST00000489304 LRRC24Q50LG9 513 aa22.1■■□□□ 1.13
CD40-206ENST00000489304 DDRGK1Q96HY6 314 aa22.1■■□□□ 1.13
CD40-206ENST00000489304 GPATCH3Q96I76 525 aa22.1■■□□□ 1.13
CD40-206ENST00000489304 CAMKK2Q96RR4 588 aa22.1■■□□□ 1.13
CD40-206ENST00000489304 SETDB2Q96T68 719 aa22.1■■□□□ 1.13
CD40-206ENST00000489304 DDX60Q8IY21 1712 aaKnown RBP22.09■■□□□ 1.13
CD40-206ENST00000489304 CIAO1O76071 339 aa22.09■■□□□ 1.13
CD40-206ENST00000489304 GYS1P13807 737 aa22.09■■□□□ 1.13
CD40-206ENST00000489304 CCDC57Q2TAC2 916 aa22.09■■□□□ 1.13
CD40-206ENST00000489304 ATG9AQ7Z3C6 839 aa22.09■■□□□ 1.13
CD40-206ENST00000489304 CCDC24Q8N4L8 307 aa22.09■■□□□ 1.13
CD40-206ENST00000489304 ECHDC1Q9NTX5 307 aa22.09■■□□□ 1.13
CD40-206ENST00000489304 FBXO3Q9UK99 471 aa22.09■■□□□ 1.13
CD40-206ENST00000489304 GLRX3O76003 335 aaKnown RBP22.09■■□□□ 1.13
CD40-206ENST00000489304 TFCP2Q12800 502 aa22.09■■□□□ 1.13
CD40-206ENST00000489304 NFIXQ14938 502 aa22.09■■□□□ 1.13
CD40-206ENST00000489304 CASC1Q6TDU7 716 aa22.09■■□□□ 1.13
CD40-206ENST00000489304 C22orf23Q9BZE7 217 aa22.09■■□□□ 1.13
CD40-206ENST00000489304 TFCP2L1Q9NZI6 479 aa22.09■■□□□ 1.13
CD40-206ENST00000489304 EYA2O00167 538 aa22.08■■□□□ 1.12
CD40-206ENST00000489304 ERC2O15083 957 aa22.08■■□□□ 1.12
CD40-206ENST00000489304 ITGA6P23229 1130 aa22.08■■□□□ 1.12
CD40-206ENST00000489304 C3orf67Q6ZVT6 689 aa22.08■■□□□ 1.12
CD40-206ENST00000489304 ABCC12Q96J65 1359 aa22.08■■□□□ 1.12
CD40-206ENST00000489304 IL15P40933 162 aaPredicted RBP22.07■■□□□ 1.12
CD40-206ENST00000489304 IFIT5Q13325 482 aaKnown RBP22.07■■□□□ 1.12
CD40-206ENST00000489304 COL23A1Q86Y22 540 aaPredicted RBP22.07■■□□□ 1.12
CD40-206ENST00000489304 TRIM6-TRIM34B2RNG4 842 aa22.06■■□□□ 1.12
CD40-206ENST00000489304 TNNI3KQ59H18 835 aa22.06■■□□□ 1.12
CD40-206ENST00000489304 CCDC8Q9H0W5 538 aaPredicted RBP22.06■■□□□ 1.12
CD40-206ENST00000489304 GPR108Q9NPR9 543 aa22.06■■□□□ 1.12
CD40-206ENST00000489304 FPGT-TNNI3KV9GXZ4 949 aa22.06■■□□□ 1.12
CD40-206ENST00000489304 DEFB132Q7Z7B7 95 aa22.06■■□□□ 1.12
CD40-206ENST00000489304 NBPF5PQ86XG9 351 aaPredicted RBP22.06■■□□□ 1.12
CD40-206ENST00000489304 ANO8Q9HCE9 1232 aaPredicted RBP22.06■■□□□ 1.12
CD40-206ENST00000489304 COL24A1Q17RW2 1714 aa22.05■■□□□ 1.12
CD40-206ENST00000489304 MSH5O43196 834 aa22.05■■□□□ 1.12
CD40-206ENST00000489304 RILPL2Q969X0 211 aa22.05■■□□□ 1.12
CD40-206ENST00000489304 SEC31BQ9NQW1 1179 aa22.05■■□□□ 1.12
CD40-206ENST00000489304 TLR7Q9NYK1 1049 aaKnown RBP22.05■■□□□ 1.12
CD40-206ENST00000489304 RGPD3A6NKT7 1758 aaPredicted RBP22.04■■□□□ 1.12
CD40-206ENST00000489304 RGPD4Q7Z3J3 1758 aa22.04■■□□□ 1.12
CD40-206ENST00000489304 ANKRD18BA2A2Z9 1011 aa22.04■■□□□ 1.12
CD40-206ENST00000489304 GTF2E1P29083 439 aaPredicted RBP22.04■■□□□ 1.12
CD40-206ENST00000489304 RBM25P49756 843 aaKnown RBP22.04■■□□□ 1.12
CD40-206ENST00000489304 TAF7LQ5H9L4 462 aa22.04■■□□□ 1.12
CD40-206ENST00000489304 HSP90B1P14625 803 aaKnown RBP22.03■■□□□ 1.12
CD40-206ENST00000489304 NYXQ9GZU5 481 aa22.03■■□□□ 1.12
CD40-206ENST00000489304 CHMLP26374 656 aa22.03■■□□□ 1.12
CD40-206ENST00000489304 HMGB2P26583 209 aaKnown RBP22.03■■□□□ 1.12
CD40-206ENST00000489304 SLC10A5Q5PT55 438 aa22.03■■□□□ 1.12
CD40-206ENST00000489304 PNPLA7Q6ZV29 1317 aa22.02■■□□□ 1.12
CD40-206ENST00000489304 TM4SF1P30408 202 aa22.02■■□□□ 1.12
CD40-206ENST00000489304 CNTROBQ8N137 903 aa22.02■■□□□ 1.12
CD40-206ENST00000489304 CASZ1Q86V15 1759 aa22.02■■□□□ 1.12
CD40-206ENST00000489304 TPTE2Q6XPS3 522 aa22.01■■□□□ 1.11
CD40-206ENST00000489304 DBNLQ9UJU6 430 aaKnown RBP22.01■■□□□ 1.11
CD40-206ENST00000489304 CARMIL3Q8ND23 1372 aa22.01■■□□□ 1.11
CD40-206ENST00000489304 COL4A1P02462 1669 aa22■■□□□ 1.11
CD40-206ENST00000489304 SF3B2Q13435 895 aaKnown RBP22■■□□□ 1.11
CD40-206ENST00000489304 CCDC152Q4G0S7 254 aa22■■□□□ 1.11
CD40-206ENST00000489304 LRP5O75197 1615 aa22■■□□□ 1.11
CD40-206ENST00000489304 RTL9Q8NET4 1388 aa22■■□□□ 1.11
CD40-206ENST00000489304 DDR1Q08345 913 aa22■■□□□ 1.11
CD40-206ENST00000489304 LDHAL6AQ6ZMR3 332 aa22■■□□□ 1.11
CD40-206ENST00000489304 RIPOR2Q9Y4F9 1068 aa22■■□□□ 1.11
CD40-206ENST00000489304 ZNF609O15014 1411 aa22■■□□□ 1.11
CD40-206ENST00000489304 MAP4K4O95819 1239 aaPredicted RBP21.99■■□□□ 1.11
CD40-206ENST00000489304 ATP5JP18859 108 aa21.99■■□□□ 1.11
CD40-206ENST00000489304 BAG6P46379 1132 aa21.99■■□□□ 1.11
CD40-206ENST00000489304 SF3B3Q15393 1217 aaKnown RBP21.99■■□□□ 1.11
CD40-206ENST00000489304 ESYT1Q9BSJ8 1104 aa21.99■■□□□ 1.11
CD40-206ENST00000489304 CEP126Q9P2H0 1117 aa21.99■■□□□ 1.11
CD40-206ENST00000489304 REC8O95072 547 aa21.98■■□□□ 1.11
CD40-206ENST00000489304 SERPINB2P05120 415 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms